Sceloporus undulatus (fence lizard): 121926508
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Entry
121926508 CDS
T07740
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03410
Base excision repair
sund03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121926508 (POLL)
03450 Non-homologous end-joining
121926508 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sund03400
]
121926508 (POLL)
Enzymes [BR:
sund01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121926508 (POLL)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
121926508 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
121926508 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
HHH_5
BRCT_2
HHH
BRCT
NTP_transf_2
PTCB-BRCT
HgmA_C
LIG3_BRCT
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
121926508
NCBI-ProteinID:
XP_042315465
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All DBs
Position
3:complement(211834521..211852084)
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AA seq
573 aa
AA seq
DB search
MEPQGIVKAFPKRKKSRDASQKVVPPKVLKDETRNKQGWLEPVTAYVLQAGIGQARAEIF
QKQILQNGGSVCSQLFPEVTHVIVDEGMDCERAFRLLRLTKLPRGLQLVKASWMSSCISA
QRLLDTTGYSLFIPEKYLDVAGHSKRHSQYLDEEMIHLPMENEVMELKAESQSGANVPCS
VVDSSGQQEDKGMFSDDEGTEGEERIVTLGELEALKSGQQLNTFAPSIPTVLPTSKWVCA
QSSESKKMNHNQCITEKLGLMEKAYSVQGDKWRALGYSKAINALKSYHKPVTSYQEACKI
PGIGKKMAEKIIEILESGHLRKLDHISESVSVLEVFSNIWGAGVKTAQMWYQQGFRTLDD
IRAKASLTSQQAIGLKHYEDFLERIPREEAAEIEQTVREAAQAIQPGLECIACGSFRRGK
STCGDVDVLVTHPDGHSHQGVFRRLLDCLWRKGFLTDDLVSQEDNGNQKKYLGVCRLPGP
YRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSSGVVRGHGG
LKTVLGLALPTPTEKDVFSLLGLPYREPHERDW
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggaaccccaaggaattgtcaaagctttccctaaacgaaagaaatcaagggatgcatca
cagaaggtagtgcctccaaaggtactgaaagatgaaactaggaacaaacaaggatggttg
gagccagtcacagcctatgttctgcaagctggaattggtcaggccagggctgagatcttc
cagaagcagatcctccagaatgggggaagcgtctgcagccagctttttccagaggtgaca
catgttatagtggatgagggcatggactgtgagcgggctttccggctcctcagactaacc
aaactacccaggggactgcaactggtaaaggcatcttggatgagttcatgtatttcagca
cagcggcttttggacactactggctatagcctcttcattccagagaaatatctggatgta
gcaggccattcaaagaggcattcacaatatctggatgaagagatgatccacctgcccatg
gagaatgaagtcatggagctaaaagctgaatcacagtcaggagccaacgttccctgcagt
gttgtagactcttcaggacagcaagaagacaaagggatgttctcagatgatgaaggaact
gaaggggaggaacgtattgtcaccctgggagaactagaagcactgaagtcaggccaacag
cttaacacttttgcaccaagcattccaacagtgcttcccactagcaagtgggtttgtgca
cagtcctctgaaagcaagaaaatgaatcataatcagtgcattacagagaagctgggattg
atggaaaaagcctattctgtccagggcgacaagtggagggctttaggttactccaaagcc
attaatgcactcaagagctatcacaagccagtcacctcttatcaggaagcctgtaagatc
cctggaattgggaagaagatggcagaaaagattatagaaatcctggagagtggacacctt
cgaaagcttgaccacatcagtgagagtgtgtcagtactggaagtcttttctaatatttgg
ggtgcaggagtgaagactgctcagatgtggtatcaacagggtttccgtactctggatgac
atccgtgctaaggcctctttaaccagccagcaggccattggcttgaagcactacgaggac
ttcttggagcgcataccaagggaagaagctgctgaaatagaacagacagttagagaagca
gcacaagctatccaacctgggctagagtgcatagcatgtggctcattccggcggggaaaa
tccacctgtggggatgttgatgtgcttgtgactcaccccgatggacactcccaccaagga
gtatttaggcgactacttgactgcctctggaggaaaggctttcttacagatgacttggtg
agtcaggaagacaatggaaaccagaagaagtaccttggagtctgccgtttgccaggccca
tacaggcgccaccgtcgtcttgatatcattgttgtgccctacagtgagtttgcatgtgcc
ctgctctacttcactggctcagcccacttcaatcgctctatgcgagctctggccaagacc
aagggcatgagtctgtcagagcatgccctcagcagtggcgtggtacgtggacatggtggt
ctcaaaacagtgctgggccttgctctgcccacccctactgagaaggatgtgtttagcctt
ctgggtctaccttaccgggagccacatgagagagactggtga
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