Sceloporus undulatus (fence lizard): 121926574
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Entry
121926574 CDS
T07740
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
121926574 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sund04121
]
121926574 (RAG1)
Enzymes [BR:
sund01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121926574 (RAG1)
Ubiquitin system [BR:
sund04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121926574 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-RING_6
zf-RING_10
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-rbx1
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
121926574
NCBI-ProteinID:
XP_042315593
LinkDB
All DBs
Position
1:298776506..298779649
Genome browser
AA seq
1047 aa
AA seq
DB search
MEMLPPPSMNLCFVSEQSQQPYKKFSEWKFKLFKVRSLEKPLPDDNRLANNNKGKVAAIL
DKVIEKEIEPVALVPHPLFETDTELNKGMQPIDKSAFSMSHTEAETHQANLQHLCRLCGG
SFKTDPHKRSYPVHGPVDDETQALLRKKEKKATSWPDLLAKVFKIDVKGDIDTIHPTKFC
HQCWTVVQKKLNNSPCEMFFSRKSPVEWNPHSSSCDVCGASLHGVKRKKQVLNPQLSKKL
RMVSGHARKIRQIRNPKQVSQKSLMKMIASCKKIHLSTKILAVDYPADFVKSISCQICEH
ILADPVETTCKHLFCRACILKYLKIVGSYCPACRYPCFPTDLVSPVKSFLNILNSLPVVC
PVKDCQEEICLGKYCYHLSRHKEVEDKEGYVYINKGGRPRQHLLSLTRRAQKHRLRELKL
QVKAFAEKEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGKGTGLHPAVCLAIRVN
TFLSCSQYHKMYRTVKAVTGRQIFQPLHALRTAEKSLLPGYHPFEWKPPLKNVSSNTEVG
IIDGLSGIQQLVDDYPVDTIAKRFRYDAALVSALMDMEEDILEGLKSKNLDDYFKGPFTV
VIKESCDGMGDVSEKHGCGPAVPEKAVRFSFTLMSISATHENASIRIFEENKPNSELCCK
PLCLMLADESDHETLTAILSPLVAEREAMKDSVLTLDMAGIPRTFKFIFRGTGYDEKLVR
EVEGLEASGSTYICTLCDATRLEASQNLILHSITRSHAENLERYEVWRSNPYQETVDELR
DRVKGVSAKPFLETVPSIDALHCDIGNAAEFYKIFQFEIGEVYKNPDASKEERKRWQSAL
DKHLRKKVNLKPVTRMNGNFARKLMTKETVEAVCELLKSEERHEALRELMELYLKMKPVW
RSSCPTKECPELVCQYSFNSQRFAELLATKFRYRYGGKITNYFHKTLAHVPEIIERDGSI
GAWASEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKHLQKFMNAHNMLKSQG
FTISPENNERDFMTLDESLEIPDSMEF
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggagatgcttccacctccaagcatgaatttgtgctttgtgtcagaacaaagtcaacaa
ccatataagaaattttcagaatggaaattcaagctcttcaaagtaagatcacttgagaag
ccacttcctgatgacaaccgtctggctaacaacaataaaggaaaagtggcagctattctg
gataaagtcattgagaaagagattgagccagtggctctagtgccacatccactctttgaa
acagacactgagttgaacaaaggtatgcagccaatagataaaagtgccttttctatgagc
catacagaggcagaaacacatcaggcaaatctgcagcatctctgccgcctctgtggaggc
tcatttaaaactgatcctcataagagaagctacccagttcatggaccagtagatgatgag
actcaggcccttctcagaaagaaagagaaaaaggcaacatcttggccagatcttcttgcc
aaagtttttaagattgatgtgaagggagatattgacacaatccatcctacaaagttttgt
catcaatgttggactgtggttcaaaagaaattaaacaattccccatgtgaaatgtttttc
tcaaggaaaagcccagtggagtggaatccccattcctcaagctgtgatgtttgtggtgcc
tccttacatggagtaaagagaaagaagcaagttcttaatccacagctgagcaaaaaattg
agaatggtatctggacatgctagaaaaataagacaaataaggaatccaaaacaagtcagt
caaaagagtttaatgaaaatgattgccagctgcaagaagattcatctcagtaccaaaatc
cttgcagtagactatcctgcagactttgtaaagtcaatttcttgccagatatgtgaacac
atcctggctgacccagtagaaacaacgtgcaaacacttattctgcagagcctgcatcctt
aaatatctcaaaatagtgggaagctattgtccagcttgtcgctatccttgctttcctact
gatctagtaagccctgtgaaatcattcctgaacatcctgaatagtctacctgtggtatgt
ccagtaaaagattgtcaggaagaaatctgtttgggaaaatactgttaccatctttccaga
cacaaagaggtagaagacaaagagggctatgtgtacataaacaaaggtggccgaccaaga
caacacttactttcattgacacggagagctcaaaagcaccgcctaagagaactgaagtta
caagtaaaagcttttgctgaaaaagaagaagggggagatgtcaaatctgtgtgtctaact
ttgttcctactggctctgagagccagaaatgaacacagacaagctgatgagttggaagct
ataatgcaagggaaagggacaggcctccatccagctgtttgcttggcaatcagagtcaat
acttttctcagctgtagccagtaccataaaatgtacaggactgtaaaagctgtaactggg
agacagatattccagccactccatgcgctccgaactgctgaaaagtccctcttgccaggt
taccatccatttgagtggaaaccacccttgaaaaatgtctctagtaacacagaagtaggc
attattgatgggctttcaggcatacaacagttggttgatgactacccagtagatacaatt
gcaaagagatttcgatatgatgcagctttggtttctgccttgatggatatggaagaagac
atcctagaaggcctgaaaagtaagaacttggacgactacttcaaaggccctttcactgtg
gtgattaaagagtcctgtgatggaatgggagatgttagtgagaaacatggttgtggacca
gctgtccctgagaaagcagttcgattctccttcacactcatgagcatctctgccactcat
gaaaatgcaagcataaggatttttgaagaaaacaagcccaattcagagctatgttgcaaa
ccactgtgccttatgctggctgatgagtcagaccacgagacactcacagccatcctgagt
cctcttgtggcagaaagagaggccatgaaagacagtgtactgacacttgatatggctgga
atccccagaacattcaaatttatctttagaggcactggctatgatgaaaagctagttcgt
gaagtagagggccttgaagcctcaggttctacttacatttgcacgctgtgtgatgcaaca
cgcctggaagcttcccagaatttgatccttcactccatcactaggagtcatgcagaaaac
ctagaacggtacgaggtatggaggtccaatccttaccaagagaccgttgatgaattgcgt
gacagagtgaagggggtttctgcaaagccctttctagagactgttccttcgatagatgcc
ttgcactgtgacattggcaatgcagctgaattttacaagatattccagtttgagattggt
gaagtgtacaaaaatcctgatgcatcaaaagaagagagaaagagatggcagtcagctctt
gacaaacacctcagaaagaaggtgaacttgaagcccgtaacaaggatgaatgggaatttt
gccagaaagcttatgaccaaggagactgtggaagcagtttgtgaactgctaaagagtgag
gagagacatgaagccctcagagaactcatggagctttacctgaagatgaaaccagtgtgg
cggtcttcatgtcccaccaaagaatgcccagaactagtatgccagtatagtttcaattcc
caacgttttgcagagctgctggctacaaaattccgttacagatatggcggaaagattacc
aattactttcacaaaacccttgctcatgttccagaaataattgaaagagatggctctatt
ggtgcttgggcaagtgaaggaaatgagtctgggaacaaactattcagacgttttcgaaaa
atgaatgccaggcaatcaaaatgctatgaaatggaagatgtcttaaagcaccattggctg
tatacctcaaaacatttacaaaagttcatgaatgctcataatatgttgaaaagccagggg
tttacaattagtccagaaaataatgagcgagatttcatgactttggatgagtctttggaa
attcctgattctatggaattttaa
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