Sceloporus undulatus (fence lizard): 121926602
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Entry
121926602 CDS
T07740
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sund04121
]
121926602 (ZSWIM8)
Ubiquitin system [BR:
sund04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
121926602 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
121926602
NCBI-ProteinID:
XP_042315632
LinkDB
All DBs
Position
3:149288762..149362454
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AA seq
1819 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDTNAAPLLE
ILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPHRRRDLCTQLRQWQLKVIDNVKRGQHKKSLEKLFHGFKPAVEACYFNWEEAY
PIPGITYSSTDKKNSFCWVKAIQQRNCRPQCAEMCDAGRSHGTDAAGTCLQLGERSRLAS
QEPAVRPKELIGKRKIVSEGPQRALRRLSAEVDKATYKTAVNKGKLPVGKNLASKHSGKR
RMSSEDSSLEPDLAELTLDDSSLALGAEASNTFSFPDSPLNRSYRDTYEDDGGVYFSEAT
EPTLRSSPSTKKTSKDPVGEVCSGDDDIPCPDESTGGLCLKPKEIEENGAAGGEEEEDDY
QVYYLNPQEVTKEEDEKAEGGTEEEQDIFAGIKPLEQENRMEILFACAEALYAHGYSNEA
CCLTVELAKDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLTVLSERQE
YHNLAFQIGMFALELQRPPASTKALEVKLAYQESEIVALLKKIPLGSNEMNTIRGRAEEL
REGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAAVAAL
GMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHKPQTI
SSFYSSSKPTVPNQKSPSKHATQSAAPIQHLPGASVTQQTGVPAAVQSNPSEPFLEKSTQ
ENPQRSLCEPSVESSVLKQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTGMASIDSSA
PETTSDSSPTLSRRPLRGGWAATSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGARAK
TVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSSGGH
QGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECW
DGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQDNL
MLEKACLAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGTLAQREGATGCSASGARASC
EAVRGLADTRVTSEPTTVTVAAAVTAAATVVPVISVGSTIYQQHTMAGPAMAHAHTQGLH
PYTTLQTHIPCNPQYIGHPIQHMPRPAVFPVPGSAYPQGVHPAFIGAQYPYSVTTPSLAA
TAVSFPGVPVPSMTQIAVHPYHAETGLSLSSNVAIGSVHAGSTFPAIQGTTLTSLSSQPN
SLVTGGFPSEDEQHSQPVSPQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTE
DVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMESLQRLNPAHVHNHLRTPAFH
QLVQRCQQAYIQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNLKRS
KQTKDLWQRVSLEMATFSP
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgtttgcggagtgggaggacggggaacggttctccttcgaagactctgac
cgctttgaggaagactctctttgttccttcatttccgaggcggagagcctttgccagaac
tggagaggatggcggaagcagtcggccgggcccaactcccccaccgtcaagatgaaagat
gggctggtgattccattggtggagctttctgcaaaacaggtggcatttcacattccattt
gaagtggtggagaaagtttacccaccagttcctgaacagctgcagcttcgtattgctttt
tggagctttcccgagaatgaagaagacatcaggctatactcctgcctggcaaatggcagt
gcagatgagttccagagaggtgaacagctcttccggatgagggctgttaaggaccccttg
cagataggtttccacctgagtgctacagtggttcctccccagatggtgccgccaaaagga
gcatacaacgtggcagtgatgtttgacagatgcaggatcacctcgtgtagctgcacttgt
ggagctggggccaaatggtgtgcccatgttgtagccctctgtcttttccggatacacaat
gcatctgcagtgtgtttgagagcgcctgtctcagaatcattgtctcgacttcagagagat
cagttgcagaaatttgcacagtacctcatcagtgaactccctcaacagatacttcctact
gctcagcgtctactggatgaactactgtcttctcagtctacagctatcaacactgtatgt
ggagctccagatcccactgcgggtccctctgcttcagatcaaagcacctggtacttggat
gaatctacgttaagtgacaacataaagaaaacccttcacaaattttgtggtccttctcct
gttgtctttagtgatgtgaattcgatgtatctctcctccacggagcctccagctgctgct
gaatgggcttgtctcttacgtcccctgagaggaagagaacccgagggcatctggaacttg
ctttctattgttcgggagatgttcaagagacgggacaccaatgcagctcctcttctggag
atcctaacagaccagtgtttgacatatgaacagataactggctggtggtacagtgtaagg
acatctgcatcccatagcagtgcaagtggacacactggccgtagcaatggccaatcagaa
gtagctgctcatgcttgtgcaagtatgtgtgatgagatggtggttctctggaggcttgct
gtcttggatccaaccatcagccctcatcggcgaagggatttgtgcacacaactaaggcag
tggcagttgaaggtaatagacaatgtcaaaagggggcagcataaaaaatcccttgagaaa
ctgtttcatggcttcaagccagctgtggaagcttgctacttcaactgggaggaggcctat
cccattccaggcatcacctatagcagtacagacaagaagaactccttttgttgggtgaag
gccattcagcagaggaactgtaggccacagtgtgctgaaatgtgtgacgcagggagatct
catgggacagatgctgcaggtacatgcttacagctaggggaaaggtcccgccttgcttcc
caggagccagcagtgcgtcccaaagaactcattgggaagcggaaaattgtatctgaaggg
ccacagcgtgctctgagacgtctctcagcagaagttgataaagctacgtacaaaacagca
gtgaacaagggcaagcttccagttggaaaaaacttggccagcaagcacagtgggaagcgt
cgtatgagcagtgaggacagctctctggagccagacttggctgaattgactttagatgac
agcagtttggctcttggggcagaggctagtaacacattcagtttcccagatagccccttg
aacagaagctacagggatacgtatgaagacgacggtggagtgtatttctctgaggcaact
gagcccaccctcaggagcagcccttccaccaagaaaacctccaaggatccagtaggagaa
gtgtgcagtggagatgatgatatcccttgcccagatgaaagtactggtgggctgtgtttg
aagccaaaagaaattgaagagaacggtgcagctggaggagaagaagaggaagatgactac
caagtgtattatctgaatcctcaggaggtgactaaagaagaggatgagaaggctgaggga
gggacggaagaggagcaagacatatttgctgggataaagcccttagagcaggaaaatcgc
atggagatcctatttgcctgtgcagaagctctttatgctcatggttacagcaatgaagca
tgttgcctcacagttgaacttgcgaaggacttgttggccaatcctcctgatctcaaggtg
gagcagcccccaaccaaggggaagaagaacaaggtatctactagcaagcagacatggatg
gcaacaaacactttatccaaagctgctttcttattaactgtactaagtgagcgtcaggaa
taccacaatctagctttccagattggcatgtttgctctggagctccagaggccaccagct
tctaccaaggctttggaggtaaagttggcataccaagagtctgaaattgtggctttgctg
aagaaaattccacttggctccaacgagatgaacacaatccggggaagggctgaagagctg
agggaaggaacactctgtgattaccgccctgtcttgcctctcatgctggccagcttcata
ttcgatgtgttatgcactccagtcgtttctcctactggatccagacccccaagccgtaac
tggaataatgaaatgcctggtgatgaagagcttggttttgaggcagctgtggctgcactt
ggcatgaagacaacagtgagtgaagctgagcaccctcttttgtgtgaaggtacccgaagg
gagaagggagatctggctttagctctgatgatcacatataaggatgaccagtcgaagcta
aaaaaaatcttggataaactgttagacagggaaagtcaaacgcacaaacctcagactata
agctcattctactcatccagcaagcctacagttcccaaccagaaatctccttccaagcat
gctacccagtcagctgcacctattcagcatctcccaggagcatcagtgacacaacaaaca
ggagtgcctgctgctgtccagagtaatccttcagaaccctttttggagaagagtacacaa
gagaacccacaaagatccctttgtgagccatctgtagaatccagtgttttaaaacaagaa
gggaaagttcccagccgactagctcttggaaacagaggtggatacaatggaagatgctgg
ggttcaccagtcagacaaaagaagaaacacacaggaatggccagtattgacagcagtgca
ccagaaaccacctcagacagttctccaaccctcagccgacggcccctacgtggaggatgg
gcagccacttcctggggcagagggcaggatagtgacagcattagcagctcttctagtgat
tcattgggttcctcctcttccagtggaagcaggagagccagtggaggagcacgtgcaaag
actgtggaggtcggcaggtataaaggcagacggccagagagccatgcaccacatgtccca
aatcagccttcagaagcagctgcacacttctattttgagctggccaagacagttctcatt
aaggcaggcggaaacagcagtacctcgattttcactcacccatcctccagtggtggccac
caagggcctcatcgcaacctccatctttgcgcctttgagattggactctatgcactgggg
ttgcacaactttgtctctcccaactggctctcacgaacctactcctcccatgtctcttgg
atcacagggcaagccatggaaattggcagtgcagccttgaacatcctggtggaatgctgg
gatggtcatctgacccctcctgaggtggcatcactggctgacagagcatcgagagctagg
gattccaatatggtccgggcagctgctgagctggcactgagctgcttacctcatgctcat
gccttgaacccaaatgagatacagagagcgctggtccagtgcaaggaacaggataaccta
atgctggagaaagcttgcctggcagtggaggaagcagccaaagggggtggtgtttatcct
gaagtcctctttgaagtcgctcaccagtggtactggttgtatgaacaaactgttggtgga
actcttgcccagagggagggagctacaggatgcagtgcaagtggagcccgggcatcttgc
gaagcagtccgtggactggcagatacaagagtgacatcagaacccactacagtgactgtg
gcggctgcagtaacagcagcagcaacagtggtgcctgtgatctcagtggggtcaacaatc
taccagcaacacacaatggcagggcctgcaatggctcatgcacatacccaaggtctacat
ccctataccacactccagacccacatcccttgcaaccctcaatacattgggcacccaatt
caacacatgccacggccagcagtcttccctgtgcctggctctgcttatcctcaaggtgtc
cacccagcattcattggagcacagtacccttactcggtaacaaccccatctttggcagct
acagcagtgtcatttccaggcgtgcctgtcccatccatgacgcagattgctgttcatccg
taccatgctgagacagggctgtcactgtcttccaatgtagcaattggaagtgtccatgca
gggtctaccttcccagcaattcaagggactaccttgacaagcctgtcttctcagcccaat
tcccttgttactgggggctttccttctgaggatgagcaacacagtcagcccgtcagtccg
caagggttgcactacctccactctgcctaccgagttgggatgttggcactggagatgctt
ggccgcagagctcacaatgaccaccctaacaacttctcacgcagcccaccatacacggaa
gatgtgaaatggctcttgggattagctgccaaattaggtgtcaactatgtgcatcagttc
tgtgttggagcagccaaaggagtcttgagcccttttgtgctgcaagagatcatcatggaa
tctctgcagaggctcaatcctgcacatgtccacaaccacctgcgcacaccagccttccac
cagttggtacagaggtgccagcaggcctacatacagtacatccaccaccggctgattcat
ctcactccagcagattatgacgactttgtgaatgccattcgcagcgccagaagcgccttc
tgtctgactcctatgggcatgatgcagtttaatgacatcctccagaacctgaaacgtagc
aagcagactaaggatctgtggcaaagggtctctctggaaatggccaccttctcaccatga
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integrated database retrieval system
