Sceloporus undulatus (fence lizard): 121926716
Help
Entry
121926716 CDS
T07740
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sund03036
]
121926716 (JMJD1C)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
121926716 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
zf-C5HC2
FYVE
C1_2
Motif
Other DBs
NCBI-GeneID:
121926716
NCBI-ProteinID:
XP_042315858
LinkDB
All DBs
Position
3:complement(166168629..166345599)
Genome browser
AA seq
2569 aa
AA seq
DB search
MAAAAAAVAAAAAALESRPELVGKRFLCVGAGGEEEQQPPPLQTQQQQQQQQQPQPPLVP
EKRRKKKGRWRAGVIRTVSHRDSRSPELSVYVEFDDLEWDKREWVKVYEDFAAFLVEYQL
VWAKRKDPSQTQGSKIKHIQWPALTFKPLVGKSVYNSITAVEFLVDKQLDFVTEDSAFQP
YQDDIDSLNPVLRDNPQLQEEVKIWVKEQKVQEIFMQGPYSLNGYRVRVYRQDSATQWFT
GIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTFLDDVVHSLLKGENIGITSRRRSRSN
QNSNTAHGHYTRAQANSPRPAMNSQAAAPKQNSHQQQRTARPNKRKGSDSSVPDEEKTKE
EKYDYIGQGENSKNKNKPFVSKRRKPEDDEKKFSMKRQRIDNTSDYSESSDSENSNKRLI
DSSSDQNSENELKSKNTSKVNGKEGKSQSSGEVEEQTLIVSQSPWHEMQEDKKLQEIERP
ESADLELQEISLHQAEQPAVYDRSANDECIQECSIEKQQPRKLLPNEQFMPACLTPKSCI
DSNIEDSSTNEAQENISNTFELQACQKMDPSGSDTKHIFSNTNFLEVRKLGTDENWINNV
SKMDLINPKVVKNVLANEHVNSEKVHYGSVPSLTVISVAEEGRVFKQSPVPETMKSKSSS
LVENPKVKSNSSPEVKHKHAQSPDNVKSKVHYLNSHVTGVSRSAVKTEHDSPRSSFHPVP
ARVSSLETTKSPLIIDKNEHFTVYRDPALIGQEPGTNHISPYLHHHNYPPHSTSHRTCLN
PNTHHSALTGAPHLLAGSSNQTLLSAINTHSLSSTSQHSVHHPHLLPAVLPGVPTASLLG
GHPRLETAHASSLSHLALAHQQQQQMLQHQSPHLLGQSHPSASYNHLGLYPIIWQYPNGT
HAYSGLGIPSSKWVHSEASVNTETPLRRNTPSPWLHQPTPVTSTDSLGLLSHIPVRPSSA
EPHRPIKLTTHSSPPLSKSIVEHHKEELERKGIFEPLRSIATAPAKSDLEHNRTPTVKEG
HLQRHFVDPLQRSLQETGERLSKYKEEHRRILQESIEVAPFTAKIKALEGERETYSRIMP
LPSSPKSHGAKHDKDSELYKMKHSVPQSLPQSNYFTTLSNSVVNEPPRTYSSKEVSGMCV
DKQSSCPSTAGAQSLTTFTSSLSKPPPLIKHQPEAESSVGKITDQLSQQVTSHSVNSFRN
DSRSPTQLSVSSSSALRTMPALHRAPVFHPPVHHSVERKEGSYNSLSPPTLTPVQPVNAG
SKIHELQKPPTLLPEPKEAQNVYKNVMEQKISDMRKSNNVPNNDKMEWHVDRGSGKSPSA
TASVIVRPPSSTKYDIVSVVQSVPKERVTERSLTGTNQTDGLKPAEVRETERIVLPNVNS
DTIHAQYEKNFPAASQGSVPSSVTPTTTMLCSTKTDVTTSVASTGVPTMGSSEVTYCLSN
TAVACSSVENTASRAINQEVVHIQECGVSTTAPVTLACSKMESILQANSGFSGTSDFIHL
KKHKAALAAAQFKSISASDIESNAVKNPIYPASVSLDSTVISSTINKVNTVGSGQVSQTS
QANCHTKLKKAWLTRHSEEDKNTNKKENSGNNVSEIIKPCTVNLIVSTSNELQNNVDSKI
LGEKLVKEEKHTRRKTKRAYESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKKKG
DTEEEVKPNGVLSRSAKEKSKLKLQSGSVNTGIPRSVLKDWRKVKKLKQTGESFLQDDSC
YEIGPNLQKCRECRLVRSKKGEESAHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDD
EAMSLWTHENYDDDDELDLETCKYILEHIGDKFCELVTSEKTAMSWVKKDAKIAWKRAVR
GVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHK
HLMPTQIIPGCVLMELLEAVHTFREKHEIKAHCQCTSKQNLQVGKLPSMNGVSQILQNVL
NHSNKISLCIPESQQQKASQKTETNGNTSPGSDISADSKLTPPESQSPLHWLADLAEQKA
REEKKENKDCPPSKHTKEEQDQDSPETLNYKMSTPLSQNNEQGSTLRDLLTTTAGKLRLG
STDAGIAFAPVYSTGTASSKGGRTMPNILDDIIASVVENKIPPNRTPKINLKSEVKDEPK
DEKKIITDDFSILFSDVPHAWICDKHVLWLSDHKNCNNWKLFKDCWKQGKPVLVSGIHKK
LNATLWKADLISSDFGDIKADLLNCKDSVTSNGSVKEFWDGFEDVSTHSLICVFAERQKI
KNAETVVLKLKDLPSGEDFRTMMPARYEDLLKSLPLPEYCNPEGKLNLASYMPGFFVRPD
LGPRLCSAYGVAAAKDHDIGTTNLHIEVSDVVNILVSVGIAKGSGVPSKSGVLKKFEEED
LDDFLRKRLKDSSELPGALWHIYASKDADKIREFLQKVGKEQGLDVLPEHDPIRDQSWYV
NKKLRQRLFEEYGVKTCTLIQFLGDAIILPAGALHQVQNFHSCIQVTEDFVSPEHLVQSF
HLTQELRLSKEEINYDDKLQIKNILYHAVKEIVKALKIHEHETEDGEDN
NT seq
7710 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccgctgctgccgtcgccgccgccgctgctgccttagagtctcgtccggag
ctggtcgggaagcgtttcttgtgtgtcggggcgggaggcgaggaggaacagcagccgccg
ccgctgcagacacagcagcagcagcagcagcaacaacagccacagcctccccttgttccc
gagaagaggaggaagaagaaggggcgctggagggccggcgtcatccgcaccgtctcccac
cgggactcccgcagccctgagctctcggtgtatgtggaatttgatgaccttgaatgggac
aaacgggaatgggttaaagtttatgaagattttgcagccttcctggtagagtaccagctg
gtctgggcaaagagaaaggatcctagccagactcagggatcaaagatcaagcatattcag
tggcctgcattgactttcaaacctttggttgggaaaagcgtgtacaattctatcactgca
gttgaatttcttgtagacaaacagttggattttgtaactgaagatagtgcctttcagccc
tatcaggacgacatagacagtttaaacccagttctcagggacaacccacagcttcaggag
gaagtaaaaatctgggtgaaggaacaaaaggtgcaagagatttttatgcaaggtccatat
tccttaaacggctatagagtgagagtatacagacaggattctgccacccagtggttcact
ggtataattactcatcatgacctgttcactcgcactatgattgttatgaatgatcaggtt
ttagaaccacaaaatgtcgatccctcaatggttcagatgacctttctagatgatgtcgtt
cactctttgttgaaaggtgaaaatattggcattacttcgcgacgcaggtctcgttccaac
cagaacagcaatacagcccacggacactataccagggcacaagcaaatagcccaaggcca
gctatgaattcccaggctgcagcaccaaaacaaaattcgcatcagcagcaaaggactgct
cgtccaaataaaaggaaaggctctgatagtagtgtccctgatgaagagaagactaaagag
gaaaaatatgactacataggtcaaggagaaaattccaaaaataaaaacaaaccctttgtt
tctaaaagaagaaaacctgaagatgatgaaaagaaattcagtatgaagagacagcggata
gacaacacctcagactattctgagagcagtgactcagaaaactcaaacaaaagattgata
gattcttcatcagatcaaaattcagagaatgaattgaaaagtaagaatacttcaaaagta
aatggaaaagaaggaaaatcccagagcagtggtgaggtagaggaacaaacgctaatagtc
agccaatccccttggcatgaaatgcaggaagataaaaaacttcaagaaatagaaaggcca
gagtcagccgacttggagctgcaagaaatttcactccatcaagccgaacagccagcagtt
tatgatcggagtgccaatgatgaatgcattcaagagtgtagtatagaaaaacaacaacct
aggaagctcttgccaaatgaacaatttatgcctgcctgtcttacaccaaaaagttgtatt
gattcaaatattgaggacagttctactaatgaggctcaggaaaatatatcaaatactttt
gaattgcaagcatgtcagaaaatggatccttctggcagtgatacaaaacatatattttca
aatacaaactttctagaagtaagaaaattggggactgatgagaactggattaataatgtc
agtaaaatggacttgataaacccaaaagttgtgaaaaatgttttagcaaatgaacatgtt
aattctgaaaaagttcactatggttcagtgccatctttaactgtaatttctgtagcagaa
gagggcagagtgtttaaacaaagtccagttcctgagacaatgaagtcaaaatctagttca
ctggttgaaaatcccaaagtcaagtcaaattcttcacctgaagttaaacataaacacgcc
cagtctcctgataatgtgaagtcaaaggttcattacctgaacagtcatgttactggagta
tcaaggtcagcagttaaaactgagcatgattcgcctaggtctagtttccatccagttcca
gctagagttagctcattagaaactactaaaagtcctcttatcattgacaagaatgaacat
ttcacagtttaccgagatcccgctcttattggacaagaaccgggaactaaccatatatca
ccatatttacatcaccataactatcctcctcattccacttcacacagaacatgcttaaat
ccaaacactcaccattctgcactaactggtgcaccccatctattagctggatcatcaaac
caaactcttttgtctgctattaatactcattctcttagtagtacatctcagcattctgtt
catcacccacatctacttcctgcagtgttacctggagtgcctacagcctctttgttggga
ggccatccacgactagagactgctcatgctagcagcttaagccatttggcattagcacac
cagcaacaacaacagatgctacagcaccagtcaccacatcttcttgggcaatcccaccct
tctgcttcgtataatcacctaggactttatccaattatttggcagtacccaaatggaaca
catgcttactcaggacttggaataccttcctctaaatgggtccattctgaagcttctgtt
aacactgagactccgctgagaaggaatactcctagtccttggttacatcaacccactcct
gtgacctcaactgacagtcttgggttactgagtcacatacctgtaagaccatccagtgca
gagcctcatcggccaatcaaattgacaacacattctagtcctccattgtctaaaagcatt
gtggagcatcataaagaagagctggaaaggaaagggatttttgaacctttgcgttccatt
gcaactgctccagcaaagtcagatttagagcataacagaacaccgactgtaaaagagggc
catttgcaaagacactttgtggacccactgcaaagatctcttcaagagactggagagaga
ctaagcaagtataaagaagagcacaggcggatacttcaagaaagtattgaagttgctcct
tttacagctaaaatcaaggcacttgagggtgaaagggagacttattccagaataatgcca
ttaccctctagccctaaaagccatggagcaaaacatgacaaagattcagaactttataag
atgaagcattcagtaccacagagcttgccacaaagtaactactttactaccttgtctaat
agtgtagtgaatgaaccaccacgaacatactcatccaaagaagtttcaggtatgtgtgtt
gataaacagagtagttgcccttcaacagctggtgctcagtcacttactactttcacttca
tctctttcaaaaccaccaccattgattaaacatcagccagaagctgaaagctcagtaggc
aagataactgatcagctttcacagcaggtgacttctcattcagtaaattcttttagaaat
gactccagaagtcctactcagttgtcagtttcatcctcaagtgcactccgaacaatgcct
gctttgcacagagcaccagtgtttcaccctccagtccatcatagcgtggagagaaaggaa
ggaagttacaatagtctttctcctccaaccctaacaccagtacaaccagttaatgccggg
agcaaaattcatgaattgcaaaagcctccaactttgttacctgagccaaaagaagcacaa
aatgtttacaagaatgttatggagcaaaaaatttctgatatgcggaaaagtaataatgtt
ccaaataatgataaaatggaatggcatgttgacaggggtagtgggaagtcaccatctgcc
actgcttctgtcattgtacgtccaccttcaagtacaaagtacgatattgtatctgtagtg
caatcggttcccaaagaacgagttactgaaagatcattgaccgggacaaaccagacagat
ggtctgaaaccagcggaagtgagagagactgaacgaatagttctgccgaatgtgaattcg
gacacaattcatgcccagtatgagaagaactttccagctgcttcccagggcagtgttccc
agttctgtcacacctactacaactatgctgtgcagtaccaaaacggatgtaaccacatct
gtggcttctactggcgttccaactatgggcagttcagaagtgacttactgtttgtcaaat
acagcagtagcttgctcatcagtagagaatactgcttctagagccataaaccaggaagtt
gtgcacatacaagaatgtggtgtcagcaccacagctccagttacactagcctgcagcaaa
atggaaagtattcttcaagccaattctggtttctctggaacatctgattttattcacttg
aaaaagcacaaagcagcgctggctgcagctcagtttaaaagcatcagtgccagtgatata
gagtcgaatgctgtgaaaaatccaatatatccagcctctgtttccctcgacagtactgtc
atctctagtacaataaacaaagtgaatactgtaggcagtgggcaagtttcccagacaagt
caagcaaactgccacacaaaactgaaaaaagcttggctcacgagacattcagaagaagat
aaaaatactaataaaaaagagaattcagggaacaatgtatcggaaattattaagccatgt
actgttaacttaatagtttctacatcaaatgagttgcaaaataatgtagatagtaaaatc
cttggggaaaagcttgtgaaggaagaaaaacacacacggagaaaaacaaaaagggcttat
gaatctggctctgaaagtggagattctgatgaaagtgagagcaagtcagagcaaaggaca
aagcggcagccaaagccgacttacaaaaagaaacaaaatgatttgcaaaagaaaaaggga
gacacagaagaagaagtaaaaccaaatggtgttctcagcaggagtgccaaagaaaaaagc
aaactgaagttacagagtggcagtgttaatactggtataccccgttcagtgttgaaggac
tggcgtaaagtaaagaagttgaagcaaactggagaatcctttttgcaagatgactcatgt
tatgaaataggtcccaacctacaaaaatgcagagaatgtaggctggtcagaagtaagaag
ggtgaagaatcagctcactcaccagtgttctgtagattctactactttcgccggctttct
tttagtaaaaatggagtggttagaattgatggcttttcttctcctgatcagtatgatgat
gaagcaatgagtttatggacacacgaaaattatgatgatgatgatgaattagacctagaa
acgtgtaaatatatcttagaacatataggtgacaagttttgtgaattggtgacatctgag
aaaacagccatgtcctgggtcaaaaaggatgccaaaattgcttggaagagagcagtcaga
ggagttcgtgaaatgtgtgatgcttgcgaagccaccctgtttaacattcactgggtttgc
caaaaatgtggatttgtggtctgcttagattgctacaaagctaaagaacggaaaagctct
agagataaagaactgtatgcttggatgaaatgtgtgaaaggacaacctcatgatcacaaa
catttaatgccaacccaaattattcctggatgtgttttaatggaacttcttgaagcagtg
catacttttagagagaaacatgaaattaaagcccattgccagtgtaccagcaaacagaat
ttacaagttggcaaactcccttcaatgaatggggtatctcagattttacagaatgtcctt
aatcacagtaataaaatttctctgtgcatacctgagtcacaacagcagaaagcatctcaa
aaaactgagacaaatggcaacacaagccctggcagtgatataagtgcagatagcaagtta
actccaccggaatcccagtcaccactgcattggttggcagatctagcagagcaaaaggct
agagaagaaaaaaaagaaaacaaagattgtcctccttcaaaacatacaaaggaagagcag
gaccaagacagcccagaaacacttaactacaagatgtcaactcctttgtctcaaaataat
gagcagggctccactttacgagacttgctgactactactgctggcaaactacggcttggc
tctacagatgctggcattgcttttgctccagtttattctacaggaactgcaagtagcaaa
ggtggaaggactatgccaaacattcttgatgacataattgcttcagttgtagaaaataag
attccaccaaatagaacaccaaaaataaatttaaaatctgaagtgaaggatgaaccaaag
gatgaaaaaaaaattattacagatgatttcagcatattgtttagtgatgttccacatgct
tggatctgtgataaacatgttttgtggctgagtgatcataaaaactgcaacaactggaaa
ctgttcaaagactgttggaagcaaggaaagcctgtattagtgtctggaatccacaagaaa
ctgaatgcaaccttgtggaaggcagatctcatcagttcagattttggggacatcaaagct
gatctcttgaactgtaaagacagtgttacttcaaatggcagtgtcaaggaattttgggac
ggttttgaagatgtttcaacacattcactgatctgtgtgtttgcagagcggcaaaaaatt
aaaaatgcggaaacagttgtacttaaattgaaagacttgccttcaggtgaagacttcaga
actatgatgccagcaagatatgaagatttattaaaaagtttaccactgcctgaatattgt
aaccctgagggaaagctaaatttggcttcatatatgccagggttttttgtgcgtccagat
ctaggaccccgattatgcagtgcgtatggtgtagctgctgctaaagaccatgatatagga
actacaaatcttcatattgaagtatctgacgtggtgaacatccttgtcagtgttggcata
gcaaaagggagtggagtcccttcaaaatcaggggtactcaagaagtttgaagaagaagat
ttagatgactttttaagaaaaagactgaaggattcaagtgaattacctggtgctctgtgg
catatttatgctagcaaggatgccgacaagataagggaatttctacagaaggtaggaaaa
gagcaaggtttagatgttttaccggaacatgatccaatccgtgatcagagttggtatgtg
aacaaaaaactccgtcaacggctgtttgaagaatatggagtgaaaacatgtactcttatc
cagttccttggtgatgctattattttgccagcaggagcacttcaccaggtacagaatttt
catagctgtattcaagtaactgaagactttgtgtctccagaacaccttgtacagtcattc
cacttaacacaagaactgaggctctcaaaggaagaaatcaattatgatgataagctgcag
attaaaaatatcttatatcatgcagttaaggaaatagtgaaagctttgaagattcatgaa
cacgaaacagaagatggagaagacaattaa
DBGET
integrated database retrieval system
