Sceloporus undulatus (fence lizard): 121926784
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Entry
121926784 CDS
T07740
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04382
Cornified envelope formation
sund04510
Focal adhesion
sund04512
ECM-receptor interaction
sund04518
Integrin signaling
sund04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121926784 (COL4A3)
04518 Integrin signaling
121926784 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121926784 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121926784 (COL4A3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121926784 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sund04147
]
121926784 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
sund00536
]
121926784 (COL4A3)
Exosome [BR:
sund04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121926784 (COL4A3)
Glycosaminoglycan binding proteins [BR:
sund00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121926784 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121926784
NCBI-ProteinID:
XP_042316000
LinkDB
All DBs
Position
3:233708573..233822911
Genome browser
AA seq
1678 aa
AA seq
DB search
MKAPGPLLLLLAPSLLLLALQGQELDPLPVAIAAKNCICKSENRCYCDGTKGNKGEKGFP
GYPGPPGYVGFPGPEGPPGLQGPKGFPGPVGFPGPKGSRGMPGIPGYSGPPGLPGDPGNA
GPPGRLGIPGCNGTKGEQGFPGLPGQVGFPGLPGPEGTKGEKGFSANAYDQGYSSQGDPG
LPGIPGSQGEPGPRGLPGLLGPEGPLGFPGAPGRPGVPGPKGLMGAKVIGAKGIKGDSGL
MGPPGPTGTVIVTLTRADNATELKGDKGDMGSPGPPGPTGASGLPGDFRSVKGDPGDPGP
QGRPGKDGPPGPSGLQGEKGEQGFPGLPGQYGPKGIKGEAGHQGIQGPTEYYDEMPGEKG
NKGYLGLPGLKGQPGAPGPQGLIGAIGRPGISRPGPRGFPGSPGLKGRKGDRGQPGMNAI
GPPGPPGTPGQPGPPGSPGRSGQPGTITFERGPQGTPGSPGCVGPPGLSGDNGAKGEEAG
PCNQCTYITGSPGLPGVPGAEGPQGVKGVGGKFGLKGAQGSPGQQGPPGVQGLPGLPGNQ
GRKGSKGVPAYVHPEGPKGDTGETGLRGSSGEKGLDGLPGRPGLKGRRGSVGAQGSDGPK
GDRGAQGPAGSPGLPGEAGLPGAPGYGLQGMEGSKGSQGNPGVPGVPGTTGPKGELGKVI
TIPGPPGLQGPNGRPGLQGVRGSVGSRGQRGDPGLPGPEGDPGLMQIGFPGYPGLKGNKG
LQGSTGLPGCPGKIGEPGFPGKPGIPGEKGEPGPVIPGQQGRMGSPGEEGMAGDKGERGF
PGLPGLPGQQGRDGDNGPRGEPGSPGIPGEKGVPGKMGDCRVGLPGPPGSCGVVGPPGGQ
GAVGAKGDPGIPGLDIPGFPGQFGLPGIPGPQGNDGSSGNKGQPGRPGVPGIPGPRGELG
LMGPVGNPGLPGVFGNPGIPGMRGTPGFPGLKGRKGSSGGKGEPGDKGSPGISDSIVSSG
DKGDRGAKGFPGRKGQKGEKGEQGAQGCVGLNGIPGKAGPSGPKGGKGLPGVLGRPGLPG
PPGDRGDMGVPGLRGEQGSAGLPGSSGIPGQSGLPGIPGDKGEPACPGTGPPGNPGPKGD
AGLPGERGRKGERGAPGRPGLIGEPGVQGNRGDTGLPGIPGLSGPAGDNGRKGNTGLPGQ
NGIRGFPGPSGVPGGDGSVGEKGNQGRDGIPGRPGEKGAQGSPGQIIPGPQGIPGTKGIK
GEMGMAGFPGPPGAKGLRGDQGPRGPPGIPGQPGLPGKPGIMIAGPKGNRGLPGLDGKPG
VPGIPGPTGLSSYSIKGSKGTQGTDGLPGPPGSRGTDGLPGPPGNEGIPGYPGPRGETGF
PGFPGIKGEKGSRGPPGLTGVAGPGGPKGLPGQPGPSGKAVSFPGNPGPSGPPGNPGSPG
DPGPRGPSGMPGPPGIKGQPGRPGIPGARGPPGLKGDKGFQGQKGLPGLLGFPGVKGLPG
FPGACSSGPSKRGFLFSRHSQTTKIPSCPSGTVQIYSGYSLLFVQGNEQAHGQDLGTAGS
CLQRFTTMPFLVCNPNNVCRFASRNDYSYWLSTAEPMPSDMEPISGNALEPYISRCIVCE
GPAMVIAVHSQTTSVPPCPQGWQSLWKGFSFVMYTGAGSEASGQALASPGSCLEKFYAIP
FIECHGRGTCNYYSNSYSFWLASLNTRRMFRKPSPQTLKAGELEKIISHCQVCMRKSN
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccccggggcccctcttgctcctcctggccccttccctgctgctgctggctctg
caagggcaggagctggaccctttacctgtcgccatcgctgccaagaactgcatctgcaag
agtgaaaaccgctgctattgtgatggaacaaaaggcaataagggtgaaaagggctttcct
ggttaccctggcccacctggttatgtgggattcccaggtccagaaggtcctcctggactg
caaggacccaagggatttccagggccagtaggctttcctggacctaaaggttcaaggggt
atgccaggaattccaggttattcaggtcccccaggcctaccaggtgatccaggaaatgct
ggtcctccaggacgtttaggtataccagggtgcaatgggacaaagggtgagcaaggattt
cctgggcttccgggacaagttggctttccaggattaccaggtcctgaaggcaccaaagga
gaaaaaggattttctgcaaatgcatatgaccaaggctatagttctcaaggtgatcctgga
ctgccaggaatacctggatctcagggtgagcctggacctcgagggttaccaggactgctt
ggtccagaaggcccgctaggatttccaggagcaccaggaagaccaggagtcccagggcct
aagggtctaatgggagctaaagtaattggagcaaaaggaataaagggtgacagtggacta
atgggccctcctggaccaacaggaacagtcatcgtaacactaactcgagcagataatgca
acggaattaaaaggtgacaaaggagacatgggttctccaggaccccctggaccaacagga
gcatcgggtttgcctggtgattttcgaagtgtaaaaggagatccaggagacccaggacct
cagggtaggcctggaaaagatgggcctcctggtccctctggcttacagggagaaaaagga
gaacagggtttcccaggattgcctggacaatatggtccaaaggggataaaaggtgaagct
ggccatcaaggaattcagggtccaacagagtattatgatgaaatgcctggtgaaaaagga
aataagggctacttaggactgccaggacttaaaggccagcctggagcacctgggccacag
ggtctcattggtgccattggtaggccaggtatttcgagacctggtccaagaggtttccca
ggctctcctggtctcaaaggaagaaagggagatagaggacaacctggtatgaatgctatt
ggaccaccaggacctcctggaactccaggacagcctggcccaccaggatcaccaggtcgt
tcaggacaaccaggtacaataacttttgaaagaggtccacaaggaaccccaggaagtcca
ggatgcgtggggcctccgggcctttcaggagataacggagcaaaaggtgaagaagcaggc
ccatgtaaccagtgcacctacattacgggatcacctggccttcctggtgttcctggagca
gagggccctcaaggagttaaaggtgtgggaggaaagtttggtcttaaaggagcccaagga
tcgcctgggcagcaagggcctccaggagttcaaggacttccaggtcttccaggaaaccaa
ggccgtaagggatcaaaaggtgttccagcatatgtgcatccagaaggtccaaaaggagac
acaggagaaacaggtctcagaggaagttctggagaaaaagggctggatggcttaccaggg
agacctggactgaaaggcaggagaggttctgtgggagcacagggatctgatggtccaaaa
ggagacagaggtgctcaagggccagctggtagtccaggtcttcctggagaagcaggacta
cctggggcaccaggatatggactgcaaggaatggaaggttctaaaggctctcaaggaaat
cctggggtgcctggggtgcctggaacaactggtcctaaaggtgaacttggtaaggtgatt
acaattcctggaccacctgggcttcaaggaccaaatggtagacctggtttacaaggagta
agaggtagtgtgggatccagaggacagcgtggtgacccaggcctcccaggaccagaaggt
gatccaggtttaatgcagattggatttcctggatatcctggtctgaaaggcaataaagga
cttcaagggtctacaggattaccaggttgcccaggaaaaataggggaaccaggcttccct
ggaaaacctggaattccaggagaaaagggtgagccaggtccagttattcctggacaacag
ggcagaatgggttcaccaggtgaagaaggtatggcaggtgataagggtgaaagaggattc
ccaggacttccaggacttccaggtcaacaaggtcgagatggtgataatggtccaagagga
gaacctggatcccctggaattccaggagaaaagggtgttccaggcaaaatgggtgactgt
cgtgttggcttaccaggaccaccaggttcatgtggagtagtaggtccaccaggaggccaa
ggagcagttggagccaaaggagacccaggaattccaggattagacatcccagggttccca
ggacaatttgggctgcctggaattcctggcccacaaggaaatgatgggtcatctggcaat
aagggacagcctggcaggccaggagtgccaggtataccaggtccaagaggagaactaggc
ttgatgggccctgtaggtaatcctggattacctggtgtctttggcaatccaggtatccct
ggaatgaggggtactcctggcttcccaggactgaaaggaagaaaaggatcttcaggggga
aagggtgagccaggtgataaaggttcccctggaatatcagactccattgtgagttctgga
gataaaggagacagaggagctaaaggatttccaggaagaaaaggacaaaaaggagaaaaa
ggagagcaaggtgcacaaggatgtgtaggtctgaatggcataccaggaaaagcaggtcca
tcaggtcccaaagggggaaaaggacttccaggagtccttggcagaccagggttgccagga
cctccaggagacagaggagacatgggagtgccaggtcttagaggtgaacaaggttctgca
ggtttgcctggatcatcaggtataccagggcaatctggtttacctggcataccaggggat
aaaggagaaccagcctgtcctggaacaggaccgccaggaaacccaggacccaagggtgat
gctggtctaccaggagaaagaggacggaaaggtgaaaggggagcaccaggccggccaggg
ctgataggagaacctggagtacagggaaatagaggagatactggtttaccaggaattcca
gggctctcaggacctgcaggtgataatggtcgtaaaggcaatacagggttgccaggacaa
aatggcattagaggctttccagggccaagtggggtaccaggtggtgatggatcagttggt
gaaaagggtaatcaaggacgtgatggtattcctggacgccctggagaaaaaggagcacaa
ggttctccaggtcagataatccctggtcctcaaggcattcctggtactaaaggtatcaaa
ggagaaatggggatggctggttttccaggacctccaggtgctaaaggtcttagaggcgac
caaggaccgaggggacctcctggtatacctggacaaccaggacttcctggcaaaccagga
ataatgattgctggtccaaaaggaaatagaggtctcccaggtctggatggaaagccaggt
gttccaggtatcccaggacccactggactctctagctacagtataaaaggaagcaaaggt
actcaaggaacagatggcttacctggtccaccaggatctagaggaacagatggcctacct
ggtccaccaggaaatgaaggtattcctggttatccaggtcctagaggtgaaactggtttt
ccaggatttccaggcataaaaggagagaagggtagtcgtggaccacctggactaacagga
gtagcagggcctggtggtccaaagggcttacctggtcagcctggaccatctgggaaagct
gtctcttttccaggaaatccaggaccatctgggccaccaggaaacccaggaagcccagga
gatccagggccaagaggaccatctgggatgccagggcctccaggtataaagggccagcca
ggtcgtcctgggattccaggtgcacgtgggccacctggactaaaaggcgacaagggattt
caaggccaaaaaggtttgccaggcctgcttggatttcctggagtaaagggacttcctgga
ttcccaggggcttgttcatcaggcccatcaaaaagaggcttcttgttttctcgccatagc
cagacaacaaagattccttcatgtccatctgggacagttcagatctacagtggatattct
cttctttttgtacaagggaatgaacaagcacatggacaagaccttggtacagctggtagc
tgtcttcaaagatttaccaccatgccttttttagtatgtaatcccaataatgtttgtaga
tttgcttctcgcaatgactattcatactggctgtcaacagcagagccaatgccgtcagat
atggaacctatttctgggaatgctttggaaccctacattagcaggtgtattgtctgtgaa
ggccctgcaatggtaatagcagtccatagtcagacaacttcagttccaccatgtcctcaa
gggtggcagtcactgtggaaaggattttcttttgttatgtatacaggtgcaggttcagaa
gcttctggacaagctctggcatctccagggtcatgtttagaaaaattctatgcaattcca
ttcattgaatgtcatggacgagggacctgcaattattactcaaactcctacagcttctgg
ttggcttcattaaatacaagaagaatgtttaggaaaccatcaccacagactctgaaagct
ggagaactggaaaaaataataagtcactgtcaagtttgcatgaggaaatctaattaa
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