Sceloporus undulatus (fence lizard): 121927190
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Entry
121927190 CDS
T07740
Symbol
HIF1A
Name
(RefSeq) LOW QUALITY PROTEIN: hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04137
Mitophagy - animal
sund04140
Autophagy - animal
sund04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121927190 (HIF1A)
04137 Mitophagy - animal
121927190 (HIF1A)
04148 Efferocytosis
121927190 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sund03000
]
121927190 (HIF1A)
Transcription factors [BR:
sund03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121927190 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
HIF-1a_CTAD
PAS_11
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
GUCT
PAS_2
Motif
Other DBs
NCBI-GeneID:
121927190
NCBI-ProteinID:
XP_042316751
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All DBs
Position
1:complement(371121537..371195126)
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AA seq
736 aa
AA seq
DB search
MEPGEEEEAPGGSSEKKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHQVSAHL
DKASIMRLTISYLRMRKLLDSGDLEAEAEMETQLNCFYLKALDGFVMVLSEDGDMIYMSE
NVNKCMGLTQFDLTGHSVFDFTHPCDHEELREMLTHRNVPLDSKTSXSRHSLTXEFSYCD
ERITELIGYDPEELLGRSIYEYYHALDSDHLTKTHHDMFAKGQVTTGQYRMLAKQGGYVW
VETQATVIYNTKNSQPQCIVCVNYVLSGVVQGDLIFSLQQTECMLKPVDSPEMGVIKILD
KTELEDSNSLFEKLKKEPDALTYLAPAAGDTIIALDFGNDETDEQQFDDVPLYNDVMLPS
SSEKLQSINLAMSPLPASEATKLLRSNADPALNREVVSKLESSTEPLDLAFSTRRTQDQP
ATPSDGSTSQSSPEPSSTPNDYCFDVDNEMASEFKLELVEKLFAIDPESKKPFSTQETDL
DLEMLAPYIPMDDDFQLRSFDQLSPLENSSANPPSNGATVTEFQSAPVPLHTTEKIKPVT
IKHEEDSKALTAPIHITLEMNNAPALPYTENRSRTTSPVRTGKGTPEQKETSSPGTPNLL
TVTLGKSRSTTTNEELNPKIIALHNIQRKRKMEQDSLLFQAVGIGTLLAQSSTPGTNVSL
AWKRVKGCKPNGQNEVAEKTVILLPSDIASKLLGQSMDEKGLPQLTSYDCEVNAPIQGNR
NLLQGEELLKALDQVN
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggagcccggcgaggaggaggaggccccgggcggctccagcgagaagaaaaggattagt
tcagaacgcagaaaggagaagtctcgagatgccgccagatgccggagaagtaaagagtcg
gaggtcttctatgaacttgctcaccagttacctctgccccatcaagtgagcgcacatctc
gacaaagcctccattatgcggttaacaatcagctacctacggatgagaaaactgctggat
tccggtgacctggaggcagaagctgaaatggagacacagctgaattgcttttacctaaaa
gctcttgacggatttgtcatggttctctcagaggatggtgacatgatttacatgtctgaa
aatgtgaacaagtgtatgggactcacacagtttgacctgactggacacagtgtgtttgat
ttcactcatccgtgtgaccacgaagagctgagagagatgctcacccaccggaatgtcccc
ttggacagcaaaacatccnncagccgccacagcctgacanntgaattttcatactgtgat
gaaagaattacagagctgatagggtatgaccccgaagagctcctgggtcgctccatatat
gaatactaccatgccctagactctgatcatctgaccaaaacacatcatgatatgtttgct
aaagggcaagtgacaaccgggcagtacagaatgcttgccaagcaagggggctacgtctgg
gttgagactcaagcaactgttatctacaacaccaagaattcccagccacagtgtatagtg
tgtgtgaattacgttttaagtggcgttgttcagggggacttgattttttcactccagcaa
acagagtgtatgttgaaaccggtagattctcctgagatgggtgtgatcaaaatacttgac
aagactgaactggaagatagcaacagcctctttgagaaactgaagaaggagccagatgca
ttaacctaccttgctcctgcggctggagacaccataattgcattagatttcggcaatgat
gagactgatgagcaacagtttgatgacgttcctttgtataatgatgtaatgctcccctca
tccagtgagaaattgcagagtataaatttggccatgtccccactacctgcttctgaagct
acaaaactgctccgtagcaatgctgacccagcacttaatagagaggtggtgtctaagctg
gagtccagcacagagcctttagatcttgctttctccactcgtcggacgcaagaccagccg
gccactccttccgacggaagcaccagccaaagctcacctgagcccagtagtactcctaat
gactactgttttgatgtggataatgagatggccagcgaattcaagttggagctggtggaa
aagctctttgcaatagatccagagtcaaaaaaaccattctctacacaggaaactgatttg
gatttggaaatgttggctccatacatccccatggatgatgatttccagctacgctccttt
gaccagctttctccactagagaacagttctgcgaaccctccttccaatggggccactgtc
acagaatttcagtcagctccagttccattgcataccacagaaaagataaagcctgtgaca
atcaaacatgaagaggactcaaaggccctcacggctcccattcacatcacccttgaaatg
aacaatgccccagcattgccctacactgagaaccgaagtcgaacgacatccccagtcaga
acaggaaaaggcacgccggagcaaaaagagacatcaagtccagggacgccaaacttatta
actgtcacgttgggtaaaagtcgatcaactacaacaaacgaagagctcaacccaaagata
atagctctgcataatattcagaggaagagaaagatggaacaggacagcttacttttccaa
gcagtaggaattggcacattattggcgcagtccagcactcctggaacaaatgtatcactg
gcttggaaacgtgtaaaaggatgcaaacctaatggacagaatgaggtggcggagaagaca
gtcattttattaccatcagatatagcaagtaaacttctagggcagtcaatggatgagaag
ggacttccacagcttaccagctatgactgtgaagtgaatgcacccatacaaggcaacaga
aacctgctacaaggtgaagagttgctcaaagccctggatcaagtcaactga
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