Sceloporus undulatus (fence lizard): 121927246
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Entry
121927246 CDS
T07740
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
121927246 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121927246 (DDX3X)
03041 Spliceosome [BR:
sund03041
]
121927246 (DDX3X)
03036 Chromosome and associated proteins [BR:
sund03036
]
121927246 (DDX3X)
Enzymes [BR:
sund01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121927246 (DDX3X)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121927246 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
121927246 (DDX3X)
Spliceosome [BR:
sund03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121927246 (DDX3X)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121927246 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
121927246
NCBI-ProteinID:
XP_042316870
LinkDB
All DBs
Position
3:complement(75442697..75465674)
Genome browser
AA seq
746 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDSQSGGGTASKGRYIPPHLRNREASKQAGNAYNYTA
NYYSNSTPPPRSYSPSWDSRGGNDYMNGYDRDSRMNGYDRDRGVFGSRGGSGRDDRGFDG
GWNAGRDRDAYSSFGARSERGSGKSSFFGDRDSGSRGRFDDRGGRGSDFDGISSRGDRSG
FGRFDRGGNSRWSDKCDEDDWSKPLPPSERMEQELFAGGNTGINFEKYDDIPVEATGNNC
PPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKYAIPIIKDKRDLMACAQTGSGKTAAFL
LPILSQLYTDGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSKV
RPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMVRGKIGLDFCKYLVLDEADRMLDM
GFEPQIRRIVEQDTMPPKGVRQTMMFSATFPKEIQMLARDFLEEYIFLAVGRVGSTSENI
KQKVVWVDESDKRSFLLDLLTATGKDCLGEFQHNSNGSGEDSLTLVFVETKKGADSLEDF
LFREGFACTSIHGDRCQRDREEALHQFRSGRSPILVATAVAARGLDISNVKHVINFDLPS
DIEEYVHRIGRTGRVGNLGLATSFFNEKNVNITKDLLDLLVEAKQEVPSWLENVAYEQHH
KGGSSRGRSKGRFSGGFGARDYRTSSSSSSSSFGSSRASSGRSGGGGSSGGHGGSRGFGG
GGYGGFYNSDGYGGNYNSQGVDWWGN
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcagtggagaatgccctcggtctagatcagcagtttgctggtctagac
ttgaattcctcagactctcagagtggaggaggcacagcaagtaaaggtcgctacattcct
cctcacttacggaatagagaagcttcaaagcaggcaggaaatgcctataactatacggca
aactactattccaattcgacgccaccaccaagaagctattcccccagctgggactctcgt
ggaggtaatgactatatgaatggatatgatcgtgacagccggatgaatggctacgatcgt
gatcgcggtgtgtttggatccagaggaggatctggacgtgatgacagaggatttgatggt
gggtggaatgctggcagagatagagatgcatacagtagctttggtgcaagaagtgaacgt
ggttccggaaaatcaagcttctttggtgaccgtgacagtggctcaagaggaagatttgat
gaccgtggtggaagaggcagtgacttcgatggtatcagcagtcgtggtgataggagtggc
tttggcagatttgatcgtggcggaaacagtcgttggtctgataaatgtgacgaggatgac
tggtccaaaccacttccaccaagtgaacgcatggaacaggagctgtttgctggtgggaat
acaggcattaattttgaaaaatatgatgacattccggttgaagcaacaggcaacaactgt
cctccacacattgaaagtttcagcgatgttgacatgggggaaatcatcatggggaacatt
gagctcactcgctacactcggcctactccagtgcagaaatatgccattcctatcattaaa
gacaagagagacttgatggcttgtgcccagacaggatctggaaaaactgctgcatttctt
ctgcccatattgagtcagttatataccgatggcccaggagatgccctgagagctatgaag
gagaacggaagatatggacgccgtaaacagtacccaatttcactggtgctggctcccaca
agagaattggcagttcagatatatgaagaagccagaaagtttgcatatcgttccaaagtt
cgtccttgtgttgtgtatggcggagctgacattggtcagcagatacgagacttggaacgc
ggctgccacttgcttgtggcaactccaggtcgtcttgtagatatgatggtgagaggcaag
attggactggacttctgcaaatacctggtactggatgaagctgatcgcatgcttgacatg
ggttttgaacctcagattcgtcgtattgttgaacaagacactatgccacctaagggtgtc
cgtcaaacaatgatgttcagtgctacttttccaaaggaaatccagatgcttgctcgtgac
ttcttggaggaatatatctttttggctgttggcagagttggctctacatctgagaacatc
aaacagaaagtagtgtgggtggacgagtcagacaaacggtcatttctgcttgacctcctt
actgccacaggtaaagactgtttgggagaattccaacacaactctaatggctcaggtgaa
gactccttgacactcgtttttgtggagactaaaaagggggctgattctctggaggatttc
ctattccgtgaaggatttgcttgtacaagtatccatggtgatcgctgtcagcgagacaga
gaagaagcattgcaccagttccgctcaggcagaagtcccatcttggttgccactgcagtg
gcagcaagaggattggatatctcaaatgtgaaacatgttataaattttgatttgccaagt
gacatagaagaatatgtgcaccgcattgggcgtacaggccgtgtagggaatctcggcctt
gctacatcattcttcaatgagaagaacgtaaatatcacaaaggacttgttagatctgctt
gttgaagctaaacaggaagtaccgtcttggctagaaaacgtagcatatgagcagcatcac
aagggtggaagcagtcgtgggcgctctaaaggccgtttcagtggaggatttggtgccaga
gattatcgaacaagtagcagtagtagcagcagcagttttggcagtagccgtgcaagtagc
gggcggagtggcggaggtggcagcagcggcggccatggtgggagcagaggttttggaggt
ggtggctatggcggcttctacaacagtgacggatatggaggcaactataactctcagggg
gtagattggtggggcaactga
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