KEGG   Sceloporus undulatus (fence lizard): 121927324
Entry
121927324         CDS       T07740                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
sund  Sceloporus undulatus (fence lizard)
Pathway
sund03020  RNA polymerase
sund03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sund00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121927324 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    121927324 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sund03021]
    121927324 (POLR2D)
   03400 DNA repair and recombination proteins [BR:sund03400]
    121927324 (POLR2D)
Transcription machinery [BR:sund03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     121927324 (POLR2D)
DNA repair and recombination proteins [BR:sund03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      121927324 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 121927324
NCBI-ProteinID: XP_042316993
LinkDB
Position
3:216635649..216641626
AA seq 142 aa
MAVGGADARAVDVEEDASQLVFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggtcggaggggccgatgcgcgggccgtggatgtggaggaggacgcctctcagctg
gtcttccccaaggaatttgagactgctgaaacccttctaaattcagaagtgcacatgctt
cttgaacatcggaagcagcagaatgagagtgcagaagatgagcaggagctttctgaagtc
ttcatgaaaacattgaactatactgctcgcttcagccgcttcaaaaaccgggagactatt
gctagtgttcgcagtttattgctccaaaagaagcttcataaatttgaactggcatgttta
gctaatctgtgtcctgagacagctgaagaggccaaagctttaatccccagcttagagggt
cgatttgaagatgaagagttacagcaaattcttgatgacattcagaccaaacgaagtttt
cagtattag

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