Sceloporus undulatus (fence lizard): 121927790
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Entry
121927790 CDS
T07740
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121927790 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sund01009
]
121927790 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sund04131
]
121927790 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
sund03029
]
121927790 (RB1CC1)
Protein phosphatases and associated proteins [BR:
sund01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121927790 (RB1CC1)
Membrane trafficking [BR:
sund04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121927790 (RB1CC1)
Mitochondrial biogenesis [BR:
sund03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121927790 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
SpoIIID
Motif
Other DBs
NCBI-GeneID:
121927790
NCBI-ProteinID:
XP_042317608
LinkDB
All DBs
Position
4:complement(197942767..198032824)
Genome browser
AA seq
1594 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKQAIQTKYKIAIQHQVLVVNGGECMAADRKVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEIAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIDDIKLKLTHLGAAVSIMAKIPLLECLTRHSYRECLERLDTSAEQGATESEDTENEKSA
EVMLSPEILNMNKQSVLASFCKSVEHPTLGGRASEKVNENREGSQNPSIHDSGTSVELQE
SDLPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLADCRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKIVEKLSNVPQMYCLAVVEVVRRKMFVKHYREWAGALIKDGKHLYDSEKAKRESF
GKLFRKSFLRNRLFRGLDAWPPSFCTKKPRRFDGELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKASNSQVSPQSITTPRMES
TTGTIATSPKTPPLLSLQGPLCPPVCPPGPLEELSPDSIDAHTFDFETIPHPSIEQALKQ
GSLDLDSLAESPESDFMSAVNEFIIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSRR
MQDTNIRAKKEILENSAVNVYMEKCRDVAQESRLNLINIKEDLCHFRTFVEKEQCEFSSS
LKCTSIEIRNIIEKVKLSLEKTLKDKHQKELQSLKTEYESRLNTLVEDGKENQKKITKLK
CDLKGLEDVLHHKDNEFAVVKNEKEAVEILQNEKDQKLLRLESQMQNQTCEIKELRESRE
RVLESLKQLQIENEEKMQLLRDELQILEKDHLNELESNLLVRHTQEFEQLMVKHNDTLEK
LKKENVHRLEQMQESHTADVHAKEQQVEELKAKVSELSDLRCKLEVELALKEAETDEMKL
LLEENKTQQQDNLKHLVDKETEMLKKEIDKLNHIIEVNNDEYQVGLAELRTLMTIEKDQC
ISELIDRHEEETNLLRTELSKVTSLHQKALEAEKKLEEQITELQGKLELEVSTLEKQKEE
NLALCEQQKKYEATISKLAEEKELLVTNHEQDRKVLVQKLNCEKEDAVRNVCKEFELQRE
AVEKELLEKIQQLEMQVNQSSDESSASSLVAELQEKLQEEKVKFLEQLEEQEKRKNEEMQ
NIRTSLTAEQQTTFNTVLTREKMKKENIINDLSDKLKTIKQQQDRDKDLIETLSEDRARL
LEEKKKLEEEVNKLRCNFVPSTYVPPTSEAGACAVDFSAESERLTSETAEEGRMDSTLET
SMMAVNENMQMLSEEKQRIMMLEKTLQLKEEENKRLNQRLMSQSMSSVSLRHSEKIAIRD
FQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGATRRPWVLGKVM
EKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggtgaacactggaactactcttacctttgacacagaactt
gcagtgcagaatgtggcagaccttaaacaggcaatccagaccaagtacaagattgctatt
caacatcaggtactggttgtcaatggaggagagtgtatggcagctgacaggaaagtctgt
agttacagtgctggaacggatacaaatccaatttttctcttcaacaaagaaatgatcctt
tgtgaacgtcctccagctatccccaaaacgacattttcagcagaaaatgagatggaatta
aaagttgaagaatctcttatgatgcctgcagtttttcacacagtcgcttcacgaacacag
cttgctgtggaaatgtatgaaattgccaagaaactttgttccttctgtgaaggtctggtc
catgatgaacatcttcagcaccaaggctgggctgccatcatggcaaacttggaagattgc
acatattcctaccaaaagctgcttttcaaatttgaaaatgtgtattcaagttacctgcaa
tccatagatgatatcaagctaaagcttacacacttaggggctgctgtttctattatggcc
aagattccactgctggagtgcctaaccagacatagttacagggaatgtttagaacgactg
gatacgtctgctgaacagggagcgactgaaagtgaagacaccgagaatgaaaaatcagct
gaagtgatgctttctcctgaaattcttaacatgaacaaacaatcggtgttggcatcattt
tgcaaatcagtagaacatccaaccctaggtggcagagcttctgaaaaagtgaatgaaaat
agggaaggtagtcaaaacccttccatccatgacagtggcacttcagtggagcttcaagag
agtgatctgccttcatttaatgtctcccttttagattggattaatgttcaagatagacca
aatgatgtggaatctttggttaggaaatgttttgattctatgagcagactggatccaagg
attattcaaccgtttttggcagactgtcgacaaacaattgccaaattagataatcagaac
atgaaagccattaagggtcttgaggacaggctttatgcattggaccagatgatagctagc
tgtagcaggctggtaaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagcagaaaacttgaaagatccttctgtgttacctgatttatgcttgagtcatgcaaat
caattgatgattatgttaactaaccacagaaaacttttagatattaaacagaaatgtact
actgccaaacaagaacttgcaaataatctacaagtgcgactaaagtggtgctgctttgta
atgcttcatgctgaccaggatggcgagaaactgcaagccttgcttcgtctcgtgacagag
ctgctagaaagggtgaagattgtagagaagcttagtaatgtccctcaaatgtattgtttg
gctgttgttgaagttgtaaggagaaaaatgtttgtaaaacactacagggagtgggctggt
gctttgataaaagatgggaagcatctttacgactctgaaaaggccaaaagggaatctttt
gggaaattgtttaggaaatcttttctaagaaatcgtttgtttaggggacttgatgcatgg
cctccatccttttgtaccaagaaacctcgcagatttgatggtgaacttccagatatctca
ttatctgatctacaatttctgcagtccttttgtccttcagaagtacaaccattactcagg
gtccccatactttgtgattttgaacctctccaccagcatgtgcttgctctacataacctg
gtcaaagcagcacagagtttggatgaaatgtcacaaacgattacagatctgctgaatgaa
caaaaggcttccaacagtcaagtctcaccacaatctatcactacaccaaggatggaaagt
acaacaggaacaattgctacctctcctaaaactcctccactactcagtcttcaaggacct
ctgtgccctcctgtgtgtcccccaggtcctttggaagaattatctccagacagtattgat
gctcatacatttgattttgaaacgattcctcatccaagcatagagcaagctcttaagcaa
gggtctttagacttggactcattggctgaaagtccagaatctgatttcatgtcagcagta
aatgaatttataatagaagaaaatccagtatctccaaatgttataagtgatcctcaaagt
ccagagatgatggtggagtctctctattcctcagttatcaatgcaatagacagtaggagg
atgcaagacacaaatatacgtgcaaaaaaggaaattttagaaaattctgctgtaaatgtt
tatatggagaaatgtagagatgttgcccaggagtcccggctaaatttaataaacatcaaa
gaagatctttgtcactttagaacatttgtggaaaaagaacaatgtgagttttccagttct
ttaaaatgtacttctatagaaataagaaatattatagaaaaggtaaaactttctcttgaa
aaaacactaaaagataagcatcaaaaagaactgcaatctttaaaaactgaatatgaaagt
agattgaatactttagttgaagatggtaaagagaaccaaaaaaagataacaaaattaaag
tgtgacttaaaaggtcttgaagatgttttgcatcataaagataatgaatttgcagtagta
aagaatgaaaaggaagcagttgagattttacagaatgaaaaagatcagaagctacttcga
ttggaaagccaaatgcagaatcagacttgtgaaattaaggaactaagggagtcccgtgaa
agagtgttagaaagtctgaaacaacttcaaattgaaaatgaagaaaaaatgcagcttttg
agggatgaacttcagattttggaaaaagatcacttaaatgaattagaatctaatctgctt
gtcagacatacacaagaatttgaacaattaatggtcaaacacaatgatactttagagaaa
ttgaaaaaagaaaatgtacaccgacttgaacaaatgcaagaatctcacactgcagatgta
catgcaaaagaacaacaggttgaagaattaaaggccaaggtctcagaactttctgacttg
aggtgtaaattagaagttgaacttgcattgaaagaagcagaaacagatgaaatgaaatta
cttttagaagagaacaaaactcagcagcaggataatctaaaacatcttgttgacaaggaa
actgaaatgttaaagaaagagatagataaattgaaccatataattgaagttaataatgat
gaatatcaggtgggtttggcagagctaagaactctaatgacaattgaaaaagatcagtgc
atttcagaattaattgacaggcatgaagaagaaacaaatttgcttagaactgaattgagc
aaagtaacatcattgcatcaaaaagctcttgaagcagaaaaaaagttggaagaacaaata
acagaattgcaaggtaagcttgaattggaagtgagcaccttagagaagcagaaagaggaa
aatttggctttgtgtgaacagcagaagaaatatgaagccactatcagtaagcttgcagag
gagaaagaactactagtaacgaaccacgagcaggacagaaaagtacttgtacagaagctt
aattgtgaaaaagaagatgcagtacgaaatgtctgtaaagaatttgagttgcagagggaa
gcagtagaaaaagaacttttggaaaaaatccagcaacttgagatgcaagttaatcagagt
tctgatgaatcatctgcatcaagcttggttgcagaacttcaagaaaagcttcaggaggaa
aaagtgaagtttttggagcagcttgaagaacaggagaaaaggaaaaatgaggaaatgcaa
aacattcgaacatcactcactgcagaacagcagactacctttaacactgttctaacaaga
gaaaaaatgaaaaaagaaaacataataaatgacctcagtgacaaattaaaaacgataaaa
caacagcaagacagggacaaagatctgattgaaaccctttctgaagaccgagctcgttta
cttgaagagaagaagaaacttgaagaggaagttaataaactgagatgcaattttgttcca
tcaacctatgtacctcctacttcagaagctggagcttgtgcagttgatttttcagcagaa
tctgagcgattgacttcagaaacagcagaagaaggaagaatggattccacactagaaacc
agtatgatggctgtcaatgaaaacatgcaaatgttgtctgaagaaaaacagaggataatg
atgttagaaaagactctgcagctgaaagaagaagaaaacaagaggctaaatcaaagattg
atgtctcaaagtatgtcttcagtgtctctaagacattctgaaaaaattgccattagagat
tttcaggttggtgatttggttctcattattttggatgaacgtcacgacaactatgtatta
tttactgttagcccaactttgtatttcttacattcagaatctcttgctgcactggatctc
aaaccaggtgagtgtgcttcaggtgcaactcgaaggccctgggtgttaggaaaagtaatg
gaaaaggaatattgtcaggcaaaaaaggcacaaaatagatttaaagttcctcttggtaca
aaattctacagagtaaaagcagtgccatggaacaagaaagtataa
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integrated database retrieval system
