KEGG   Sceloporus undulatus (fence lizard): 121927791
Entry
121927791         CDS       T07740                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
sund  Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:sund00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sund01009]
    121927791 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sund03036]
    121927791 (KDM5B)
Enzymes [BR:sund01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     121927791 (KDM5B)
Protein phosphatases and associated proteins [BR:sund01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121927791 (KDM5B)
Chromosome and associated proteins [BR:sund03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121927791 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 zf-PHD-like zf_topless PHDvar_NSD
Other DBs
NCBI-GeneID: 121927791
NCBI-ProteinID: XP_042317614
LinkDB
Position
4:complement(44151239..44228689)
AA seq 1542 aa
MSEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLH
FTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLFQLNRLVAEEGG
FDLVCKDRKWTKIATRMGFSPGKAVGSHIRVHYERILYPYNLFQSGASLLAPDICSKLMC
LVDDAVLEKCFQKPDITSGTKDKEYKPHDIPQRQSVQPSETCPSARRAKRMRAEATNIKT
DSEETTETKTHNLRRRMGSTPAKPDGDKESHSIVKWETVEKKQPIWEIDREKVKGRSKKN
YNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECNK
PQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTV
EYGADIASKEFGSGFPVRDGKIKLRPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMK
LPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFE
SQPDLLHQLVTIMNPNTLMSHGVPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFC
TVDWLPLGRQCVEHYRLLNRYCVFSHDEMICRMAAKAETLDVVVASTVEKDMAIMIEDEN
ALRKAVFKLGVTDSERMNLEMLPDDERQCIKCKTTCYMSAVYCACNPGLLVCLYHVEDLC
TCPTYQYKMGYRYTVDELYPMMNALKLRAESYNEWASSVNEALEAKVNNKKSLMSFKALI
EESEMRKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELR
LFVRQLYALPCVLSQTALLKDLLNRVEDFQKYSQKLLSEEIPSASELQELLDVSFDFDVD
LPQLGELRIRLEQARWLEDVHHVCLDQNSITLDDMRRLIDSGVGLAPHPAVEKAMAKLQE
LLTVSEHWDDKARTLIKARPRQTLNSLDAAVKEIEEIPAYLPNGVALKDAVKKAKDWLQE
VEGLQAGGRVPVLDTLVELVSRSRSIPVHLEYLPRLESLVAEVQAWKACASNTFLTENSS
YSLLEVLCPRCDIGTLGFKRKTKKLKEPVLNGKKRNTKLENLSDLERALSESKETAAAMA
TLGEARLKEMEALHSMRVANEEKLFSNEQDIEIKVCLCQKEPAAPMIQCELCRGVFHTSC
ISVPSNLQEPRVWLCPHCHRSEKPPLEKILPLLASLQRIRVRLPEGDALRYLIERTVNWQ
HRAQQMLSSGNVKLIQDNMGSGILYSRWQTMAGQLHETSKVSQTIGATSFSLPHDWNNRP
MHLHSPFSTGQNCIPLHAISAELNELMMEAQLLQVSLPEIQELYEILFTKQSPVSKTEQR
SPVGPANEKNDCRGKRDGICSTERKLKRRFERGNFCSEMRTRVRKITPNKKKLKLTHLRE
LNTSKLERERLFDIQCPGESQLLLSDMSFSEQEESEDEDAICPAVNCLQPEGDEVDWVQC
DGCCNQWFHQVCVGVSPEMAEKEDYICASCTGKDFPYHKQNA
NT seq 4629 nt   +upstreamnt  +downstreamnt
atgtcggagttcctgccgccgcccgagtgcccggttttcgagcccagctgggaggagttc
gccgaccccttcgccttcatccacaagatccggcccatcgccgagcagaccgggatctgc
aaagtgcgcccgccgccggactggcaacctccatttgcatgtgatgttgacaaacttcac
ttcactccacgaatccaaagattgaatgaattagaggcccaaacccgggtaaaactaaat
ttcctggatcagattgcaaagttctgggaacttcaaggatgcacactgaaaattccacat
gtagaaagaaagatcttggacttgttccagctcaatagactcgttgcagaagaaggtgga
tttgacttggtctgtaaggacagaaagtggactaaaatagccacaaggatggggttttca
cctggcaaagctgtgggttcacatattcgtgttcattatgagcgcattctttatccttac
aatttattccagagtggagctagcttactggcacctgacatttgttccaaactgatgtgt
ttagtggatgatgcagttctggaaaagtgttttcagaagccagatattacaagtggtaca
aaggataaagagtataaaccccatgatattcctcaaagacagtctgttcagccatcggaa
acttgtccatctgcacgtcgagcaaaacgcatgagagctgaggctactaatattaaaact
gattcagaggaaactacagaaaccaaaactcacaacttgagacgtagaatgggaagcacc
cctgcaaaacctgatggtgataaagaatctcatagcatagtgaaatgggaaactgttgaa
aaaaaacaaccaatttgggaaatagatcgagaaaaagtaaagggacgctctaagaaaaac
tataatgctgtggatttgtatgtgtgtctcttatgtggcagtggtaatgatgaggaccgt
ctgctcctctgtgatggttgtgatgacagttaccataccttttgcttaataccacctctt
catgatgttcccaagggggactggagatgccctcaatgcctagctcaggaatgtaataag
ccacaagaagcattcggttttgaacaggcagcacgagactacacgctccgcacgtttgga
gaaatggcagatgccttcaagtcagattatttcaatatgccagtccatatggttccaacg
gaactggttgagaaagagttctggcgtcttgttagcacaattgaagaggatgtcacagta
gaatatggtgctgatattgcgtcaaaggagtttggcagtggatttcctgtgagagatggg
aaaattaaattaagaccagaagaagaggaatatcttgatagtggatggaatttgaacaac
atgcctgtgatggaacagtctgtacttgctcacatcactgcagatatatgtggaatgaaa
ttgccctggctgtatgtagggatgtgcttttcttcattttgttggcatattgaagaccac
tggagctattctattaattatctgcactggggagaacctaaaacatggtatggagctcca
ggatatgcagctgagcaattagaagatgttatgaagaagctggctcctgaattatttgaa
tctcaaccagaccttttacatcaactagttacaattatgaatcccaatacattgatgtct
catggtgtgcctatttaccgaactaatcagtgtgctggtgaatttgtgattacatttcca
agagcctatcatagtggctttaaccaaggtttcaactttgctgaagctgttaatttctgc
actgttgactggttgccattgggtcgccagtgcgtggaacactatcgcttattaaaccgc
tattgtgtgttttctcatgatgagatgatctgtagaatggctgccaaagcagagactctt
gatgtggtggtagcatcaactgttgagaaagacatggctattatgattgaagatgaaaat
gctttacggaaggctgtgtttaaactgggagttactgattcagagagaatgaatttggaa
atgttgcctgatgatgaacgacaatgcataaagtgtaaaaccacttgctatatgtctgca
gtctactgtgcttgtaatcctggtttattggtatgcctgtatcatgtagaagacctctgt
acatgtcccacttaccagtataaaatgggatatcgctacacagtagatgaactgtatcct
atgatgaatgcacttaagttgagggcagagtcctacaatgaatgggcttccagtgtcaat
gaagctttggaggcaaaggtgaataataaaaaaagtctcatgagtttcaaagctttaatt
gaagaatctgaaatgaggaagtttccagacaatgatttgctgcgacatctccgattagtt
actcaggatgcagaaaaatgtgcctcagttgcacagcagctgcttaatggcaagaggcaa
actagatatcgatctggaggaggaaaatcgcagaatcaactgactgtgaatgaactccgc
ttatttgttagacaactctatgctttgccatgtgtcctcagccaaacagcattgctgaag
gatcttcttaatcgggtggaagacttccagaagtatagccaaaaactgctctctgaagaa
attcctagtgcttcagaactgcaggaactcttggatgtcagttttgactttgatgttgat
cttccccagctaggtgaattacgaatacgcctagaacaagcacgctggctggaagatgta
catcatgtttgcttggaccaaaattctatcactctagatgatatgagaaggctcatagac
tctggtgtaggactggctcctcaccctgctgttgagaaggcaatggctaaactgcaagag
ctcttaacagtatctgaacactgggatgacaaggctagaaccctgataaaagccagacct
cgccaaacattaaatagtcttgatgcagcagtaaaggagatagaggaaattcctgcttat
cttccaaatggtgtagcactgaaggatgctgtaaaaaaagccaaagattggctacaggaa
gtagagggcctgcaggctggtggacgtgtgcctgtgttagatacgcttgtggaacttgtg
tcaagaagtcgctctattccagttcatttggaatatctgccaagactagagtcattagtg
gctgaggttcaagcttggaaagcttgcgcaagcaatactttcttgactgaaaactcttct
tactctcttcttgaggtgttgtgtccaagatgtgatattggcacactggggtttaaaaga
aaaacaaaaaaattaaaagaacctgttttgaatgggaaaaaaaggaacaccaaactggag
aatttaagtgatttagaaagagctttatctgagagtaaggaaactgctgctgcgatggct
acacttggtgaagcccgtttaaaggaaatggaagcactgcatagcatgagagttgcaaat
gaagaaaaactcttctcaaatgaacaagatatagagatcaaagtttgcctttgccagaaa
gagccagcagcaccaatgatacagtgtgagctgtgcagaggtgttttccataccagctgt
atttcagttcccagcaatctgcaggaacctcgggtatggctttgtccacactgtcataga
tctgaaaagccacctttagaaaagattctgcctttactggcctccttgcaacgtattcgg
gtgagactgccagagggagatgctttacggtatctgatagagagaaccgtgaactggcaa
cacagagcacagcaaatgctatcctcagggaatgtaaagcttatacaagacaacatgggc
tcagggatactgtacagcagatggcaaaccatggctggccaattgcatgaaactagtaag
gtttcacagacaattggtgctacatccttctctttgcctcacgactggaataacagaccc
atgcatttacactctcctttttctacaggacaaaactgcatcccccttcatgccataagt
gcagagctgaatgaactgatgatggaagcacagttactacaagtctcattaccagaaata
caagagctgtacgagatcttattcacaaaacagagccctgtttcaaagacagagcaaaga
tcaccagtgggaccagcaaatgaaaaaaatgattgtcgagggaagagagatggaatttgc
tctacggaaaggaaattgaagaggcggtttgagagaggcaatttctgcagtgaaatgaga
acaagagtcaggaaaataactcccaacaagaaaaaactgaaattgactcatttgagggaa
ctgaataccagcaaactggaaagagaaaggctgtttgacattcagtgtcctggtgaaagt
cagttgcttctttcagatatgtccttctctgaacaagaagaatctgaagatgaggatgca
atttgtccagctgtcaactgcctgcagcctgaaggtgatgaagtggactgggtacaatgt
gatggctgctgcaaccaatggttccatcaagtatgtgtgggtgtttctccagaaatggct
gaaaaagaagactatatttgtgcaagctgtactggaaaggactttccttatcataaacag
aatgcctga

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