Sceloporus undulatus (fence lizard): 121927801
Help
Entry
121927801 CDS
T07740
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sund03016
]
121927801 (TRMT13)
Enzymes [BR:
sund01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
121927801 (TRMT13)
Transfer RNA biogenesis [BR:
sund03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
121927801 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
NNH6
Motif
Other DBs
NCBI-GeneID:
121927801
NCBI-ProteinID:
XP_042317631
LinkDB
All DBs
Position
4:110751397..110761848
Genome browser
AA seq
476 aa
AA seq
DB search
MAAPSEPSSSPQPHPGRRCAFFVERKRRFCKMVPAQGRRFCGEHGAQEEEKGRKRIPCPL
DPKHTVYEDQLQKHLKKCNSREKPKPVYFAQDINAGLKDSTELSEEQQVPLSTLSKEDLE
DLIRKLRRASTSINYVLKDQILCHQALQEALSDPKNGDAATKHLKQQASILGNMERLHLL
RPGNCFVEFGAGRGKLSHWVDIAIQDAQDVHFLLVERATTRFKVDGKHTKSSFERLQVDI
QHLNLSTVPVLAKEKLPVIGIGKHVCGAATDLALRCLAETYAKHCDERKEDPAPKRLKTD
ETNKTTYNSDETCIKSVCGNGSPVAGIVIALCCHHRCDWKHYVGQEFFTTLGLGAMEFNY
FKRMTSWATCGMRETARKASVTDTKNEEQSIETEEHEKDGNSVDCSWDSLQGLLTTEERK
QLGHLCKLLIDHGRIEYLQQRGYEAVLQYYTDLSVSLENVLLTAVPCQSPIPPSTA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccctcagagccctcttcttcccctcagcctcatcccgggcgacgctgcgcc
ttcttcgtggagaggaagaggcgcttctgcaagatggtccctgcccaaggaaggcgcttc
tgtggagaacatggcgcccaagaggaagaaaaaggcagaaaaagaattccctgccctttg
gatccaaagcacactgtatatgaagatcagctgcaaaaacatttgaagaagtgtaattca
agagagaaaccaaagcctgtctactttgcccaagatattaatgcaggactgaaagattca
acagaattatctgaagaacagcaagtgccactttctacactgtctaaagaagacttagaa
gacctaattaggaagctaagaagagcaagtactagtataaattatgtacttaaggaccaa
atcctttgtcatcaggctttacaagaggctctgagtgaccccaaaaatggagatgcagct
actaaacatttgaagcaacaggcttctatattaggtaacatggaaagactgcatttactt
cgaccggggaactgttttgtcgaatttggagccggacgaggaaagctgtcccactgggtg
gatatagctatccaagatgctcaagatgttcattttcttttggttgaaagggcaactaca
aggttcaaggtagatgggaagcacacaaaaagtagttttgaaaggcttcaagttgatata
caacacttgaacttaagtacagtacctgttcttgcaaaagagaagctacctgttatagga
attggaaagcatgtatgtggtgctgcaacagatcttgctttgagatgtttagctgaaacc
tatgcaaaacactgtgacgagagaaaggaagatcctgctccaaaacgcttgaagactgat
gaaaccaacaaaacaacttataattcagatgaaacttgtatcaaatctgtctgtgggaat
gggagtcctgtggctggaattgttattgcgctctgttgccatcacaggtgtgactggaag
cattatgtaggccaagaattctttacaacattaggacttggggcaatggaatttaattat
tttaaaagaatgacaagctgggctacttgtggcatgagagagactgcaagaaaagcctct
gtgactgatacaaagaatgaagagcaaagcattgagacggaagaacatgagaaagatggc
aatagtgttgattgcagttgggatagccttcaagggctgttaaccactgaagaacgaaaa
cagttaggtcacctttgcaaactgttgattgatcatggtcggattgaatatttacagcag
agaggttatgaagctgttttgcagtactatacagacctcagtgtgtcgttagaaaatgtc
cttttgacagctgtgccatgtcagtctccaatacccccctcaactgcttaa
DBGET
integrated database retrieval system
