Sceloporus undulatus (fence lizard): 121927815
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Entry
121927815 CDS
T07740
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sund03021
]
121927815 (CTR9)
Transcription machinery [BR:
sund03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
121927815 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_12
TPR_17
TPR_10
TPR_6
TPR_11
TPR_7
TPR_9
ANAPC3
TPPII_C
Motif
Other DBs
NCBI-GeneID:
121927815
NCBI-ProteinID:
XP_042317704
LinkDB
All DBs
Position
1:278698441..278730177
Genome browser
AA seq
1178 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQDKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREIEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGAGRRSKKTGEFDEFVNDDSDDDLPVSRKKKRRKGSGSEQDGEEEEGEKKKKKRRRA
QKADDGTDDDDNETAPRPKKRRPAKNEKRKPKPERLPPSMKGKIKSKAIISSSDDSSDED
KLKIADDGNARNSNSDSDDAEARNKRIMSDSDSNNSNKSVSERGSPRRPTAHPSDEDSDS
NGSARRRRQSDSEQSDNESVQSGRSQSVRSGRSQSVQSGRSHSAGSENESRPASRSADSD
RDSERASDNEGSGNESEPEASNNEASERGSYGGSDDSD
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggggctcgattgagatccccctccgggatacggacgaggtcattgaacttgac
tttgatcagttgccggagggggatgaagttataagtattcttaaacaggaacatactcag
ctgcacatatggattgctctagcgttggaatattacaagcaaggcaaaacagaagatttt
gtgaaactgctagaggctgctcgtatagatggaaacctcgattatagagatcatgaaaaa
gatcaaatgacttgcttagatactttagcagcctactatgtacagcaggctcgtaaagaa
aagaataaagacaacaagaaagaacttattacacaggctacgctactgtacactatggct
gacaaaatcattatgtatgatcagaatcatttattaggaagagcctgtttctgccttttg
gagggtgataaaatggatcaagctgatgcacaatttcattttgtgcttaaccaatctcca
aataatattccagcacttcttggtaaggcgtgcatttcatttaacaagaaagattatcga
ggtgcccttgcgtactacaaaaaagcactgagaaccaacccaggctgcccagctgaggtt
cggttgggcatgggccactgctttgtaaagctgaataagctggaaaaagctcgcctggca
ttcagcagggcactggaactcaactccaaatgcgtgggagcgttagttggactggctgtt
ctggaactaaataacaaagaggctgattcaatcaaaaatggtgtccagctgctctcgagg
gcgtacacaattgatcctagtaacccaatggtgttaaaccacttggctaatcactttttt
ttcaaaaaggattatggtaaggtccagcatttggctcttcatgctttccataatactgag
gttgaagcgatgcaagcagagagctgctaccagttagccaggtctttccatgttcaggag
gattatgatcaagcattccagtactactatcaggctacccagtttgcttcctcctctttt
gtgctaccattttttggactgggtcaaatgtatatttaccgaggagataaagaaaatgca
tcacagtgttttgaaaaagttttgaaagcctatccaaacaattatgagacaatgaaaatt
cttggatccctctatgctgcttcagaagatcaagataaaagagacattgcaaagggtcat
ttgaagaaggtgacagaacagtacccagatgatgtagaagcctggattgaactagcacaa
atcctagaacagacagatatacagggtgccctttcagcttatggtacagcaacacgaatc
cttcaggaaaaagtgcaggctgatgtccctcctgagattttgaataatgtgggtgctctc
cacttcagacttgggaacttaggagaagcaaagaaatactttttggcatctctagatcgt
gctaaagcagaagcagaacacgatgagcattactataatgccatttcagtgactacttcc
tacaaccttgcaagattatatgaagcaatgtgtgaattccatgaagcagaaaaattgtac
aaaaacatcctaagagaacatccaaactatgtagactgctatctgcgcttaggagctatg
gctagagataaaggaaacttttatgaagcttctgactggtttaaagaggcacttcaaatc
aatcaggaccacccagatgcttggtccttgattggtaatcttcatctggccaaacaagag
tggggtccaggacaaaagaaatttgaaagaatattgaagcagccatcaactcagaatgac
acttactctatgttggctctaggcaatgtgtggttacaaactctacaccagcccaccagg
gacagagaaaaggaaaagcgtcatcaagatcgtgcgttagccatctacaaacaagtgctc
agaaatgatccaaagaatttgtatgctgctaatggcataggagctgtgttggcacacaaa
ggatatttccgtgaggctcgtgatgtttttgctcaagtgagagaggcaacagcagatatc
agtgatgtgtggctcaatctggcacacatatatgtggagcagaagcagtacatcagtgct
gtacagatgtatgaaaactgcctcagaaaattctataaacaccagaacacagaggtatta
ttgtatttggcccgtgctctcttcaaatgtgggaaactgcaagagtgcaagcagacactg
ctgaaggctagacatgtggctcccagtgatacagttcttatgttcaatgttgccctggta
ctgcaaaggctggctacttctgtccttaaagatgaaaaaagtaacttgaaagaagtacta
aatgctgtgaaagaactggagttagctcatagatacttcagttatttgagtaaagtagga
gataaaatgagatttgatttggcacttgctgcaactgaagctaggcagtgttctgatttg
ctgagtcaagctcagtatcatgtggctcgagctcgcaaacaggatgaagaagaaagggag
ctgcgagcaaaacaagagcaagaaaaagaactgctgcgccagaagttactcaaagaacag
gaagaaaaacgtctcagggaaatagaagaacaaaagaaacttctggaacagagagcacag
tatgtggagaagaccaaaaatattctaatgttcactggagaagttgaaggatcaaaagag
aaaaaacgtggagctggccggcgttccaaaaaaactggtgaatttgacgagtttgtcaat
gatgacagtgatgacgatctcccagtgtctcgaaagaaaaagagaaggaagggcagtggc
agtgaacaagatggtgaggaagaagagggagagaagaagaaaaagaagaggcgaagagcc
cagaaagcagatgatggtactgatgatgacgacaatgagactgcacctagacccaaaaaa
cgccgtccagccaagaatgagaagagaaagcccaagccagaacgcttacctccttcaatg
aagggaaaaatcaaatcaaaagctattatttcatcaagtgatgattcatcagatgaggat
aagctcaaaattgctgatgatggaaatgccaggaacagcaacagtgattcagatgatgca
gaggcacgcaacaaacgtatcatgtcagacagtgattccaacaatagtaacaagtctgtc
agtgagaggggcagccccaggcgaccaactgcccacccttctgatgaggactcagacagc
aatgggtcagcaagaaggaggagacaatctgattcggagcaatctgacaatgaatctgtg
cagtcaggaagaagccagtctgtgcggtcaggaagaagtcaatctgtgcagtcaggaaga
agccactcagctggttctgagaatgaatctcgtccagcttctcgcagtgctgattctgac
cgagattcagagagagcatctgataatgagggttcgggtaacgagtctgagccagaggcg
tccaacaatgaagcatcagaacgaggctcatatggtggatcagatgacagtgattag
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integrated database retrieval system
