Sceloporus undulatus (fence lizard): 121927829
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Entry
121927829 CDS
T07740
Symbol
COL14A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sund00535
]
121927829 (COL14A1)
Proteoglycans [BR:
sund00535
]
Extracellular matrix (ECM) proteoglycans
Others
121927829 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
VWA_3
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
121927829
NCBI-ProteinID:
XP_042317695
LinkDB
All DBs
Position
4:232908662..233088737
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AA seq
1902 aa
AA seq
DB search
MARMKVHLLSKTLGWFLFVFIAVTAQLISHVQGQVAPPSRLRYTVVDHDSIQISWKAPRG
QFDGYKLLVTPNAGGKTNELTLQNNANKAIIQGLIPDQSYTVQIVAFAKDQESKAAQGQF
RIKDIEKKKETSGKPKVKDVGKWKPTVATEDAESTPFPKVEENQFKCKTPAIADIVILVD
GSWSIGRFNFRLVRLFLENLVAAFNVGSEKTRIGLAQYSGDPRIEWHLNTYSTKDAVLDA
VRNLPYKGGNTLTGLALTFILENNFKPEAGARPGVPKIGILITDGKSQDDVIPPAKNLRD
AGIELFAIGVKNADENELKEIASEPDNTHVYNVADFSFMNSIVEGLTKTVCSRVEEQEKE
IKGTLVATLGAPTDLVTSEVTARGFRVSWTHAPGKVEKYRVVYYPTRGGQPEEVVVDGSV
STAVLKNLMSITEYQIAVFAIYVSSASEGLRGTATTLALPMASDLELFDVSHSSMRARWS
GVPGATGYMILYAPLTDGLAADEKEMKIGESTTDIELEGLLPNTEYTVTVYAMFGEEASD
PLTGQETTLPLSPPRNLKFSNVGHSSAKLTWDPAPKKVKGYRIMYVKTDGTETNEEEVGR
VSTHTLRSLTSLTEYTVAIFSLYDEGQSEPLTGSFTTKKVPSPQYLEIHDVSTDSFRVSW
KPPSSDVALYRLAWIPLGGEETEEIVLSGEVDTHDIEGLLPSTEYEVSLVAIFDDESESD
VVAVLGTTLEVMTTEMTTLTTTSTTTFQPTTAVFRTGIRNLIIDEETTSSLRVKWDITDY
NVRQFRVTYLTARGDRGEEAVRMVMVPGRQNNLLLQPLLSDTEYKIMVTPIYSDGEGASL
SVPGKTLPLFAPENLRVSDEWYNRLRISWDAPPSPTMGYRIVYKPVNIPGPALETFVGDD
INTILILNLFSGTEYSVKVFASYSTGFSDALAGVAKTLYLGVTNLGAYQIRMTSICAQWQ
LHRHATAYRIVIESLADGTTGEVLVGGGTPRHCFFELIPGTEYKISIYTQLQEIEGPGVS
IMETTLPFPTQPPPTPSTTTPQPTIPPAKEVCKAAKADLVFLVDGSWSIGDDNFNKIIGF
LYSTVGALDKIGPDGTQVAIAQFSDDPRTEFKLNAYSTKETLLEAIQQIAYKGGNTKTGK
AIKHAQQVLFTIDSGTRKGIPKVLVVITDGRSQDDVNKVSREMQLDGFSIFAIGVADADY
SELLNIGSKPSERHVFFVDDFDAFKKIEDELITFVCETASATCPLVYKDGNSLAGFKMME
MFGLVEKEFASVEGVSMEPGTFNAYSCYKLHKDALVSQPTKYLHPEGLPSDYTITFLFRI
LPETPQEPFALWEILNKEYEPLVGVILDNGGKTLTFFNYDYKGEFQTVTFEGPDIKKIFY
GSFHKLHVVISKTTAKVVIDCKQVSEKMISAAGNITSDGIEVLGRMVRSRGPRDNSAPFQ
LQMFDIVCTTSWANRDKCCELPALRDEESCPALPHACSCSEVSKGPQGPPGLPGGPGLRG
PKGNRGDHGPKGPDGPRGEIGVPGPQGPPGPQGPSGHSIQGPPGATGEKGEKGEVGRPGL
QGVPGGSGSPGRDGNQGQRGLPGKDGPTGPQGAPGPVGIPGAPGVPGVTGNIGPQGDSGP
PGPPGAKGERGERGDLQSHAMVRAVARQVCEQLIQGHLARYNSLLNQIPSQSVSTRTIPG
PPGEPGRQGSPGPQGEQGSQGRPGFPGSPGQPGRPGERGLSGEKGERGNPGIGTQGPRGP
PGSAGPPGESRTGSPGPPGPSGPRGPAGHTGPPGPQGAAGQPGYCDPSSCAGYGTGGGYG
DPTDQDIPVVPLPHNSYQIYDHEDLYDDDDDDDEQPYLVHGSYPHPQSSYPAPRLAQPEF
TPVREEMEAVELRSPGISRFTRRMSKRSIRKPIRKRTISKTS
NT seq
5709 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaatgaaggtccatcttctgtccaagacactgggctggttcctctttgtcttc
atagcagttacagctcaattaatcagtcatgtccagggtcaagtggccccaccgtcaaga
ttaagatatactgttgttgatcatgacagtattcagatttcatggaaagcccctagaggg
cagtttgatggatataaactccttgtcactccaaatgcaggtggaaaaaccaatgagctc
actcttcaaaacaatgcaaacaaagcaattatccaaggtcttatccctgatcagagctat
acagttcaaatagttgcatttgctaaagatcaggaaagcaaggcagctcaaggccagttc
cgaattaaagatattgagaaaaagaaggaaacatcaggcaaacccaaggtcaaggatgta
ggtaaatggaaacctactgttgcaacagaggatgctgaaagtacaccatttccaaaagta
gaagagaatcagtttaaatgcaaaactccagcaattgcagatatagtgatcctggttgat
ggttcttggagcattggcagattcaacttcaggcttgttcgtcttttcctggaaaatctg
gttgcagccttcaacgtgggttctgaaaaaacaagaataggtcttgctcagtatagtggt
gacccacgaatagaatggcatttgaacacctatagtacaaaagatgctgtattggatgct
gttcgtaacttaccctataagggtggaaacaccttaacaggtcttgccttaacttttatt
ttggaaaacaactttaagcctgaggcaggtgcaaggcctggtgtccccaaaattggtata
ttaatcacagatgggaaatcccaagatgatgtcatcccacctgcaaaaaacctgagagat
gctggcattgagttgtttgctattggtgtgaaaaatgcggatgaaaatgaactgaaagag
attgcctctgaaccagataacactcatgtctataatgttgctgacttcagcttcatgaac
tccattgtggagggtcttacaaagacagtgtgctcaagagttgaagaacaggaaaaggaa
atcaaaggaacattggtagctacactcggggctcctacagacttggtcacatctgaggtg
acagccagaggatttcgtgtgagttggactcatgccccaggcaaagtggaaaaatacaga
gttgtctactatcccactagaggagggcagccagaagaggtagtggtggatggcagtgtt
tcaacagcagtactgaaaaacttgatgtctataactgaataccagatagctgtatttgcc
atatatgttagttctgccagtgaaggccttcggggtactgcaactacacttgctttgcca
atggcatcagatctggaactgtttgatgtgtctcatagcagcatgagagcaaggtggagt
ggtgtaccaggtgcaactggttatatgattctctatgcacctctcactgatgggctagca
gcagatgaaaaagagatgaaaattggggaaagcacaactgatattgagctggagggactg
ctgccaaatacagaatatacagttacagtttatgcaatgtttggagaagaagcaagtgat
cctcttacaggacaagaaacaacattgcctttaagtccaccgcggaatctgaagttttca
aatgttggacacagctcagctaaattaacatgggatcctgctcctaaaaaagtgaaggga
tatcgcattatgtatgttaagacagatggaacagaaaccaatgaggaagaggttggtcgt
gtttcaacacacactctgaggagtctaacatctctcacagaatatactgttgctattttc
tctctctatgatgagggacaatctgagccgcttacaggcagtttcaccacaaaaaaagtt
ccatcacctcagtatttggaaatacatgatgtatcaacagatagttttagagtcagctgg
aagccgccatcctctgatgtagcgctttatcgactagcatggattcccttgggaggggaa
gaaactgaagagattgtcttaagtggagaggtggacacacacgacatcgaaggcttgcta
cccagcacagagtatgaagtgtccttggtagccatctttgatgatgagagtgaaagtgat
gttgtggctgttcttgggactacacttgaagtgatgactaccgaaatgaccacgctaacc
actacaagcacaacaaccttccagcctacaacagcagtctttcgaaccggaataagaaat
ctcattatagatgaagaaactacctcaagcttgagggtgaaatgggatattacagattac
aatgttcgtcaattcagggtgacatatctcactgccagaggtgatcggggtgaggaagca
gtaagaatggtaatggtccctggaaggcaaaacaatttgcttcttcagcctctgctttca
gacactgaatataaaattatggtcactcctatctattctgatggagaaggtgccagcttg
tcagttccaggaaaaactttacccctgtttgctccagaaaatctaagagtctctgatgaa
tggtacaatcgattgaggattagctgggatgctcccccatcacccacaatgggatatagg
attgtgtataaacctgtgaacattcctgggccagcactggagacctttgtaggagacgat
atcaacactatccttattttgaatttgtttagtggaactgaatacagcgttaaagtattt
gcttcatactcaacaggattcagtgatgccttagcaggtgtagccaaaacattgtattta
ggagtgacaaatctgggagcttatcaaattcgcatgacaagtatatgtgctcagtggcaa
cttcacaggcatgcaactgcatacagaattgtgatagaatctcttgctgatggaacaaca
ggagaagtacttgtgggtggagggactcctagacactgcttttttgaactcattcctggc
actgaatacaaaatcagcatctatactcaactacaagaaatagaagggcctggagttagc
ataatggagacaacattacctttcccaacccagccaccaccaactccttcaaccaccacc
ccacagcctacaattcctcctgcaaaggaagtttgcaaagctgcaaaggctgaccttgtg
tttttggtggatggatcatggagcattggagatgacaacttcaacaaaataattggattt
ctgtacagcactgttggagctcttgataaaattggccctgatggaactcaggtggcaatt
gcacagtttagtgatgatcccagaacagaatttaaactaaatgcctacagtacaaaggaa
actcttctggaggctatccaacaaatagcatacaaaggaggaaacaccaaaacaggcaag
gcaattaaacatgctcagcaggttttatttaccattgattctgggaccagaaaggggatc
ccaaaagttttggtagtgatcacagatggacgatcacaagatgatgtgaacaaagtctcc
agagagatgcagctagacgggttcagcatatttgccatcggagtagctgatgctgactac
tcagaactgcttaacattggcagcaagcctagtgaaaggcatgtcttctttgtggatgac
tttgatgcctttaagaagattgaagatgaactgatcacctttgtctgtgaaacagcatca
gcaacttgcccattggtttacaaagatggcaacagtctagcaggatttaaaatgatggag
atgtttggcttggttgaaaaggagtttgcaagcgtggaaggagtttctatggagccaggg
acatttaatgcctactcctgttacaaactgcataaggatgccttggtttcccagccaacc
aaatatttacacccagaggggcttccttcagactacaccatcacttttcttttccgcata
ctccctgaaacaccacaggagccatttgctctctgggaaattttaaacaaggaatatgag
cctctagttggagttattttggacaacggtggcaaaaccttgactttcttcaattatgac
tacaaaggtgaattccagacagttacttttgaaggacctgatataaagaaaatattttat
ggaagtttccataagttgcacgtagtcataagcaaaacaacagctaaagtggtgattgac
tgcaaacaagtgagtgaaaaaatgatcagtgctgcagggaacattacttctgatgggata
gaagtactggggagaatggttcgatcaagaggaccaagggacaactctgcaccattccag
ttgcagatgtttgatattgtttgtaccacatcatgggccaatagggataaatgctgtgaa
cttccggctttgagggatgaagaaagctgcccagcccttcctcatgcttgttcatgttcc
gaagtcagcaagggacctcagggaccacctggactaccaggtggtccgggtctccgaggt
ccaaagggtaaccgtggtgatcatggtccaaagggaccagatggcccgcgtggtgaaatt
ggagttcctggtcctcaaggaccacctggaccacagggaccaagtggacactcaattcaa
ggacctccgggagcaactggtgaaaagggcgaaaaaggagaagttggccgtcctggctta
cagggtgtccctggtggatctggatctccaggacgagatggaaatcaaggccaaaggggt
ctgccaggcaaagatggtcccactgggccacaaggagccccaggacctgtgggaatacct
ggtgctcctggtgtgccaggagttacgggtaatattgggccacaaggtgattctggacca
cctggacctcctggagcaaaaggcgagaggggtgaacgtggagatcttcagtcacatgca
atggtccgggcagtagctcgtcaggtgtgtgaacagcttatccaaggtcatctggccagg
tacaactcactcttaaatcagattccaagccagtctgtctcaacacgaacaatcccagga
cctcctggtgaaccaggacggcaaggatcacctggaccacagggagaacaaggatctcag
ggaaggcctggatttccaggcagtcctggtcagcctggcagaccaggagaaagaggttta
tcaggagagaagggagagcgaggcaacccaggtattggaacacaaggcccccgaggcccc
ccaggatcagcaggtcctccaggtgaaagtcgaactggcagtcctggtcctcctggtcct
tcaggtccaagaggaccagctggtcacacaggtccccctgggccacagggtgcagcaggg
caaccaggctactgcgacccttcttcctgtgctggttatggaactggtggtggatatggg
gatccaactgatcaagatatccctgtcgtgccattgccacataactcctaccagatctat
gaccacgaggatctttatgatgatgatgatgatgatgatgaacagccttatctagttcat
gggtcctaccctcatcctcagtcctcctatccagcacctcgccttgctcagccagagttc
acacccgttcgtgaagaaatggaggcagttgaactgagatctccgggaataagccgcttt
acaagaagaatgtccaaaagaagcatcaggaaaccaatacgcaagcggacaatttcaaaa
acctcgtaa
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