Sceloporus undulatus (fence lizard): 121927932
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Entry
121927932 CDS
T07740
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sund03036
]
121927932 (KDM1B)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
121927932 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Pyr_redox_2
Thi4
SWIRM
HI0933_like
Pyr_redox_3
FAD_oxidored
DAO
FAD_binding_3
Pyr_redox
Lycopene_cycl
FAD_binding_2
GIDA
NAD_binding_9
2-Hacid_dh_C
AlaDh_PNT_C
NAD_binding_7
KARI_N
Attractin
Motif
Other DBs
NCBI-GeneID:
121927932
NCBI-ProteinID:
XP_042317917
LinkDB
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Position
4:174110318..174144970
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AA seq
818 aa
AA seq
DB search
MSSGRARTKKKTPPVDQSVDNLPLRSSGRQVRRKAAESPDDDEDTSEKKYRKCEKAGCTA
TCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYTAWKRIWTSN
GKSEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTSQIAQTYRCGTKLNNSTKVE
GSDQCAMPEDLRVAEVSDHWWYSMLILPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTHRL
IGESNAVKMEHFKTPPTIAGMNKYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSRDP
TMYLALRNLILALWYTNCKEPLTPQKCTHHIIVRGLVRIRCVKETERILHFMTRKGLINT
GILAVSPDQPLLPKDYRNKSVIVVGAGPAGLAAARQLQNFGIKVLILEAKDRIGGRAWDD
KTFKGITVGKGPQIVNGCVNNPVALMCEQMGIKMHKIGEKCDLIQEGGRITDPTIDKRMD
FHFNSILDVVADWRKDKNQHQDIPLGDKIQEIYKVFIQESGIQFSELEEKVLQFHISNLE
YACGSNLHEVSARSWDHNEFFAQFAGDHTLLSSGYSVIIEKMSEGLDIRLKVPVRTIDYS
GEQVQVTATDGTSWTAQKVLVAVPLAILQKGAIQFNPALSERKMKAINSLGAGVIEKIAL
QFPYRFWDSKIQGADYFGHVPPSSSKRGLFSVFYDMDPQRKCSVLMSVITGDAVATIKNL
DDKQVLQQCMTVLRELFKEQEVPDPVKYFVTRWSKDPWIQMAYSFVKTGGSGEAYDILAE
DIQGTIFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcggcagggcccggacaaagaaaaaaacaccgccagtggaccagtctgttgat
aatcttcctctgagaagttcaggaagacaggtaaggagaaaagctgcagaatcacctgac
gatgatgaagatacatcagagaagaagtatcggaagtgtgaaaaagcaggatgcactgca
acatgcccagtttgctttgccagtgctgctgaaaggtgtgctaaaaatggatatacatca
agatggtatcatctttcctgtggggagcacttctgtaatgagtgttttgatcattactac
agaagtcataaggatggctatgagaaatacactgcctggaaaagaatttggactagtaat
ggaaaaagtgaacccagccctaaagcttttatggctgaccaacaactcccttactgggtt
cagtgtacaaagccagagtgtggaaaatggcgtcagttgacaaaggaaatccagcttacc
tcacagatagcccaaacataccgatgtggcacgaaactgaacaattccaccaaggtagaa
ggctcagaccagtgcgccatgcctgaggatctgagagttgctgaagtttcagatcactgg
tggtattctatgcttattctcccacctttgctgaaggacagtgtggctgctccgttgctc
tctgcatactacccagactgtgtgggcatgagtccttcttgtacaagtactcaccgtttg
attggtgaatctaatgcagttaaaatggagcattttaagactccacctactatagctgga
atgaacaaatacttccagcctttctatcagccaaatgaatgtggcaaagccctgtgtgta
aggccagatgtaatggagctggatgaactctatgagtttccagaatattcacgggaccct
acaatgtacctcgcattgagaaatctcattctggctctgtggtacacaaactgcaaagaa
cctttaactcctcagaaatgtacccatcacatcattgttcgaggcctcgtgcgcattcgc
tgtgtgaaagagacagagcgaatccttcattttatgaccaggaagggactgattaataca
gggattttggcagtcagtccagaccagcctcttcttcccaaagactaccgcaataaatct
gtaattgtggttggagctggtccagcaggattagcagctgcaaggcaacttcagaacttt
ggcattaaggtcctcatacttgaagcgaaggacagaattggagggcgagcatgggatgat
aagactttcaagggaatcactgtgggaaaaggaccacagattgttaatggctgtgtcaac
aatccagtggctctaatgtgtgagcaaatgggcattaaaatgcacaaaattggagaaaag
tgtgacctgatccaggaaggaggaaggataactgatcctactatagataagcggatggac
ttccatttcaattctattcttgatgttgtagctgattggagaaaagataaaaaccagcat
caggatattcctcttggagataaaatccaagagatctataaagtttttattcaggaatct
ggtatccagttcagtgaactagaggaaaaggtccttcagttccacatcagtaatcttgaa
tatgcctgtggcagcaacctccatgaggtttcagcacgttcttgggatcacaatgaattt
tttgctcaatttgctggtgatcacacactcttaagctcaggatactctgtcatcattgaa
aaaatgtctgaaggcttggacattcggttaaaagttccagttcgcactatcgactattca
ggggaacaggtacaggtaactgcaacagatggaacttcatggacagcccagaaggtttta
gttgctgtacctctggctattcttcaaaaaggtgccatccagtttaatccagccttgtca
gagagaaaaatgaaagctatcaatagcttaggagcaggagtcattgaaaagattgcatta
cagtttccttaccgattctgggacagcaagattcaaggagctgattactttggccatgtt
ccacctagttccagcaaacgtggactcttcagtgttttctatgacatggatccacagcgt
aaatgtagcgttctgatgtctgtaattactggtgatgctgtggcaactattaagaactta
gatgataaacaagtcctgcagcaatgcatgactgtactccgtgagctttttaaggaacag
gaggtgcctgacccagtcaagtactttgttacacggtggagcaaagacccttggatccaa
atggcatatagttttgtaaagacaggggggagtggtgaagcttatgatatccttgctgaa
gacatacaaggaacaatcttctttgctggcgaggccaccaacagacattttccacagact
gttactggagcttacttgagtggtgttcgggaagcaagcaaaatagccgcattctga
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