KEGG   Sceloporus undulatus (fence lizard): 121928190
Entry
121928190         CDS       T07740                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
sund  Sceloporus undulatus (fence lizard)
Pathway
sund03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sund00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121928190 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sund03019]
    121928190 (RAE1)
   03036 Chromosome and associated proteins [BR:sund03036]
    121928190 (RAE1)
Messenger RNA biogenesis [BR:sund03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     121928190 (RAE1)
Chromosome and associated proteins [BR:sund03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    121928190 (RAE1)
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_TEP1_C WD40_RFWD3 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st eIF2A NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Exonuc_X-T_C Beta-prop_SPT8 B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 121928190
NCBI-ProteinID: XP_042318495
LinkDB
Position
4:complement(20140022..20164839)
AA seq 369 aa
MSLFGSTSGFGTGGTSMFGSTATDNHNPMKDIEVTSPPDDSIGCLAFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHEAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSPTPMMTLQLPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPAHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKKY
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttgtttgggtcaacatcaggattcggaactggtggcaccagcatgtttggcagc
acagctacagataaccacaatccaatgaaggatattgaagttacatcaccacctgatgat
agcattggttgtttggctttcagtcccccaacattgccgggtaatttccttattgcagga
tcatgggcaaatgatgtacgatgttgggaggtccaggataatgggcagactattccgaaa
gcacaacagatgcacacaggacctgtgctagatgtttgctggagtgatgatggaagtaaa
gtgttcacagcatcttgtgataaaactgccaagatgtgggatcttaacagtaaccaggca
atacaaattgcacagcatgaagctcctgtaaagactgtccattggattaaagcacccaat
tacagctgtgtaatgactgggagctgggataaaactttaaaattttgggatacacgatca
ccgactccaatgatgactttgcagttacctgaacggtgctactgtgctgatgtagtatat
cccatggctgttgtggctactgcagagagaggcttgatagtttatcagttagagaatcag
ccttctgaatttagaagaatagactctccacttaaacatcagcatcgatgtgtggctatt
tttaaagacaaagtgaacaaaccaacaggatttgcccttggaagcattgaaggacgagta
gccattcattacattaacccaccaaatcctgccaaagacaacttcaccttcaaatgtcat
cgatccaatggcacaaacacatctgcacctcaggatatatatgctgtaaatggaatcgcc
tttcatccagcccatggtactcttgcaactgtaggctctgatggtagattcagcttttgg
gataaagatgcacggacaaagctaaaaacatcagaacaattggaccagccaatatctgct
tgttgcttcaaccataatggcaacatatttgcatatgcctccagttatgattggtcaaag
gggcatgagttctataacccacaaaagaaaaactatatttttttgagaaatgctgctgaa
gaattaaaaccaagaaataagaagtattaa

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