Sceloporus undulatus (fence lizard): 121928379
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Entry
121928379 CDS
T07740
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121928379 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121928379 (NDC1)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121928379 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
GP41
Motif
Other DBs
NCBI-GeneID:
121928379
NCBI-ProteinID:
XP_042318919
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All DBs
Position
4:complement(82944278..82970442)
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AA seq
670 aa
AA seq
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MFHSTREQLNILGWRAAASIAWSVLLLPLCVAVFVTISNIDFVHPVQWITGSFNDLYTSY
VIFCILLMSVVIVVINIFNVEFHAVVPSIPCSRLALISKIIHPQQVIHSVAHAVMGMLVA
WCAAIMTKGKFLFLSVPCTNTESAADADLNVCLNEYHLFLLLLGAFMGYSYSLRYLVNNL
NYLPFPVIQQYKYLRFRRALPLLAKHSCVESLYMVRNFCAAYYFFGYIPRAWLITTMNLQ
TNSKLPLLDTVAGLLDLSLLYHSWLCGLFLLMTWYIAWLLFRIFSTEAHHFPVQPTFVEE
ADQCLPKVLNSNPPPLLKFLALQDLMFLSQYSPVRRQEVFSLSQPGGHPHNWTSISKECL
NLLNDLTQKLIIHQEVAAANGRLKQPPMGDLRQPPTSPGAATEENLFQTPRSILLSRAHM
PSLVKSSLLPLKASPVSDLGSNLESPFSPVPLSRKSGVLDLSSPWHGSVQSPHIMRRGPK
LWTSDMQWTDSPHETRPTITVAKSANEVVQPSYFCMWLQSKKEQLKSFLSKRVLIMYFFS
KHPEASIQALFSDTQMHIWALEGLSHLVAASFTEDRYGVVQTTLPAILNTLLTLQEVVDK
HFKLPHVSSKPPRISGNLADTSYKTLRFALRASLKTAIYRITTTFGEHLNAVQVSSEHKK
RLQQFLEFKE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtttcattcaacgcgggaacagttaaacatcttgggatggagagcagctgcaagtatt
gcttggtctgtgcttttgcttcctctctgtgttgcagtctttgtcaccattagcaatatt
gactttgtccaccctgtgcaatggatcacaggttcattcaatgatttgtatacctcctat
gttatcttttgtatacttctgatgtctgtggtaatagtggtaataaatatcttcaatgtt
gaatttcatgcagttgtgccttcaattccttgttcccgattggcattgatcagcaagatt
atccacccccagcaggtgatccattcagttgcccatgctgtcatgggaatgctggtggcg
tggtgtgctgccattatgacaaagggaaagttcctgtttttatctgtgccctgcacaaat
acagaaagtgcagctgatgctgatctgaatgtgtgcctaaatgagtaccacctctttctc
ttgctccttggagcttttatgggttacagctacagtctccggtatcttgtcaataatttg
aactaccttccattcccagttatacagcaatacaagtacctgcgcttcagaagagccctt
ccactactggcaaagcatagttgtgtggagtcactttatatggttaggaacttctgtgct
gcctactacttctttggttatattccacgggcatggctaattaccacaatgaaccttcaa
actaatagtaaacttcctcttctcgacacagtggctggcctcctggatttgtctctcctg
taccacagctggctatgtggtctgtttcttctaatgacctggtatattgcatggctgctc
ttcagaatcttttctactgaggcacatcactttcctgtccagccaacttttgtagaagaa
gcagaccagtgtttacctaaagtcttaaacagcaaccctccacctcttttaaagttctta
gctttacaggacctgatgtttctctcccagtattcccctgtgcgacgtcaagaggtcttt
agccttagccaaccaggtggacatccgcacaactggacttcaatttccaaggagtgcttg
aatcttctaaatgatctcacgcagaagctgataattcaccaagaagttgcagctgcaaat
ggaaggctgaaacagccacctatgggagacttacgacaaccccctacctctccaggagca
gcaacagaagagaacttgtttcaaaccccgaggtccatccttctttctcgagcccatatg
ccttctctggttaaatcatctttgttgcctttaaaagcttcacctgtgtctgatcttgga
agcaatttagagtcaccttttagtcctgttcctctgagtcgcaagtctggagtgttggat
ttaagctctccttggcatggatcagtccagagccctcacattatgagaagaggaccaaaa
ctgtggacatcagatatgcagtggacagactctccacatgaaacccgcccaacaattact
gttgcaaaaagtgctaatgaagtagtgcaaccaagttatttctgtatgtggcttcagagc
aagaaagaacagctcaaaagtttcttgtcaaaacgagtattgataatgtattttttcagc
aagcaccctgaggcttcaatccaggccctcttttctgatacccagatgcatatttgggct
ttggaaggtttatcacatcttgtagcagcctcatttactgaagatagatatggagttgtc
caaacaacactgccagctattctgaatactttgttaactcttcaagaggtggtagacaag
cacttcaaacttcctcatgtttccagcaaaccccccaggatctcagggaatctggcagac
acttcctacaaaacccttcgatttgctttaagagcctcactgaaaactgccatatatcgg
ataaccaccacatttggagaacacctaaatgcagttcaagtatcttcagaacataagaaa
agactccagcagttccttgagtttaaggagtag
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