Sceloporus undulatus (fence lizard): 121928410
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Entry
121928410 CDS
T07740
Symbol
SOGA1
Name
(RefSeq) protein SOGA1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sund03036
]
121928410 (SOGA1)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
121928410 (SOGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TSC22
Motif
Other DBs
NCBI-GeneID:
121928410
NCBI-ProteinID:
XP_042318991
LinkDB
All DBs
Position
4:complement(42479376..42593218)
Genome browser
AA seq
1725 aa
AA seq
DB search
MAAALAEGEPSRPPASLPVPPPPPPRPEAAKKKKLHRAPSPARPKDVPSGWSLAKSRRGV
GSLGGSFSSSSSGKMGSSGAARRVAGLGAEKKGKAASGVAKGSKGKGRSRPGVAGEPSSS
SSSRRPSAPPQALSLTDSSSEVSDCSASEEARLAEMAGRPQAGDCEEGDYEEQDEDEEDP
STAATAAALASSSSLASSSRLPLSASMAFSDLTEEMLDAGVARELEELRAENDYLKDEIE
ELRAEMLEMRDVYMEEDVYQLQELRQQLDQASKTCRILQYRLRKAERRSLRVAQTGQVDG
ELIHSLEQDVKVAKDVSVRLHNELEAVEKKRIKLEEENEDLRQRLIESELAKQVLQNEMD
KLRENSLKKRGSRSLGKADKKPPTQEDNADLKCQLHFAKEESALMCKKLTKLAKENDSMK
EELTKYRSLYGDLESSLSTEELADSPHSREAELKVHLKLVEEEANILSRRIVELEVENRG
LRAEMDDMKGQGDKELLGQDIQFAFSMTNCGESGESVVELRRHLQFVEEEADLLRRSLME
LEDQNKLLMNELNKYKSDHDLDITLSEDSCSVISETSQEELATAKVQISELSGKVKKLQY
ENRVLLSNLQRCDLASCQTTRPMLETDAEAGDSAQCIPTSLWREMPIGGEHDAKERAPGN
GFSKSHESSPTRFHHSKDVETLLDIRDQAALVSKAIDVLISDANGFTSSLKLCMDNDCSE
LVLGEAMDNESTTDSKLISAILMRLGVLQQELNTFMRKVDHIGGYMKDQKDSQPSSSSQD
SMKETLRKGHGSEIQQSEFRETPDWDVGESRPSDLYRSSNSANATIIDVDPNMEFDRSYK
SYQPDEKDSYVSEIKELQLVLSEANESLRGLQEQLSQERQLRKEEAENFTQKICQLKEDH
QKALLRREFELQSLNLQRRLEQKFWSQEKNLLVQESQQFKQNFLLLFMKLKWFLKHWRQG
KILQNEGNDFLEVNSMKELYLLIEEEEMNPQQQADNKISTRDTSSQNTPNEYIKTLSDMK
VILKELCTELREERRGMNELQQQFAKAKATWEMEKTELKCLITQLESKTGKGLTERALSD
WKTALKREREEHQHLLAESYSAVMDLTKQLQISEKNWDQEKLELLGRFKDEQQQAEQQVR
ELQNKINQLQKGTDRWALKNSEMEKHGSSWKETLNEKITDKETVSEVDMKASSLKRTKSV
SSMSEFESLLECSPYLPGKTSPDNGRSKKGPTATQVLPATLKDSTGLTPQNCAYANSERL
PSETLTTEKLDVSACDCTQTSSFSFQDQTQKHMQRSYTAPDKTGIRIYYSPPVVRRLEPP
LVHNREGKTMVEPGFLFTMAKPKEESDNSESIYSQWLCNFSKQHRELLDSGTVSEKVVPP
VPRLPPSLHDLEISGNMSDDMKEITNCVRQAIRSSSLERKIKSTSSQTVGLTSVGTQTIQ
TVSIGLQTDMPRGSIHSSKSWSPRSSSLMSVRSKQISTSLDKVHSRIERPCCSPKYGSPK
LQRRSSSKLDNSKDRSLWNLHQSKQNGSAWARSTTTRDSPVLSNINDGLSSLFNVVEHSG
STESIWKPGCQESKAKPEAPKYGIVQEFFRNVCGRTQSPTLALEKKDLVGVDNSSKKSDN
SSTAVPQQFENTSKVLDKKPLKQSCSEEPKLSIPNQGGKDRALKEPDIISAAIANEDVAC
DCSSQSLTSCFARPSRSAVRHSPSKCKLHPSDGSRMEEKAGSPSE
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgctggccgaaggggagcccagccggcccccggcctccctcccagtccct
ccgcctcctcctccgaggcctgaggcggcgaagaagaagaagctccaccgggctccgtcc
ccagccaggcccaaagatgtccccagcgggtggtcgctggccaagagccgtcgaggcgtg
ggctccctgggcggctccttctcctcctcttcttcgggcaaaatgggctcctcgggggcg
gcgaggcgggtggcggggctgggcgccgagaagaagggcaaggcggcctccggggtggcg
aaggggagcaagggcaaagggaggagtaggccgggggtggcgggggagccctcctcctcc
tcctcctcgaggcgcccctcagcgccgcctcaagccctgagcctgactgacagtagctcc
gaggtctccgactgcagcgcctccgaggaggcccggctggcggagatggcagggaggcct
caggcgggggactgcgaggagggcgactacgaggagcaggacgaggacgaggaggacccc
tcgacggccgccaccgccgccgccttggcctcctcctcctcgctggccagcagcagccgc
ctcccgctcagcgcctccatggccttctcggacctcaccgaggagatgctcgacgccggc
gtcgccagggaactcgaggagctgcgcgcagagaacgactatctcaaggatgagattgaa
gaactacgtgctgagatgctggagatgagagatgtctatatggaggaagatgtctaccag
ctgcaggagctccggcagcaactggatcaggccagtaagacctgccgcatcttgcagtat
cgtctccgtaaggcagagcggcgcagcctccgtgtagcacagactggccaggtggatgga
gaactcatccacagccttgaacaagatgtcaaggtagccaaagatgtctctgtgcggctc
cataatgaacttgaggcagtggagaaaaaacggattaaactggaggaggagaatgaggac
ctgcgccaacgactcattgagagtgagttggctaagcaggtgctgcagaatgaaatggac
aagctgagagagaattctttgaagaaaagaggatcacgttcccttgggaaggcagacaaa
aagccacccacccaggaggacaatgcagacctcaagtgtcaattgcattttgcaaaggag
gagtctgctctgatgtgcaagaagctgacaaagttagccaaagaaaatgacagtatgaag
gaggagctgacaaaatatcgttccttgtatggggacctggaaagctcactctccacagag
gagctggctgattcccctcattctcgagaagcagaactgaaggtccatctgaaacttgtc
gaagaagaagccaacattttgagccgaaggatagtggagcttgaagttgaaaaccgaggg
ctaagggcagagatggacgacatgaaggggcaaggagacaaagaactgttaggccaggac
atccagtttgccttttccatgacaaattgtggggaatctggggagagtgtggttgagctc
agacggcacttgcagtttgtggaggaggaggcagatctgttgaggcgctcactgatggag
ctagaagaccagaacaagctcctcatgaatgagcttaataagtacaagtcagaccatgac
ttagacattactctgtctgaggacagctgctcagtgatcagtgagacctcacaagaagaa
ctggctactgccaaagtccaaatcagtgagctaagtggtaaggtcaagaagctgcaatat
gaaaaccgtgtcctgctctctaacctgcagcgctgtgaccttgcctcttgtcagaccact
cggcccatgctggagacagatgctgaggcaggtgactcagcccagtgcatcccaacctca
ctttggagagagatgcctattgggggagagcatgatgctaaggagagagcgcctgggaat
gggttcagcaagtctcatgaaagcagccccacccggtttcatcactccaaggatgttgag
accctccttgacatcagggaccaggctgctcttgttagcaaagccatcgatgtcttgatt
tctgatgccaacggttttacctctagcctcaagctgtgcatggacaacgattgttcagag
ctagtgttgggcgaggccatggataatgaaagtaccactgattctaagctgatcagtgcc
attttgatgcggcttggagtccttcagcaggagctaaacacctttatgaggaaggtggac
catattggaggctacatgaaagaccagaaagattcccagccaagctccagctcccaggat
tccatgaaggaaactctacggaaagggcatggctctgaaatccagcagtctgaatttagg
gagaccccggattgggatgtcggggagagcaggccctcggatctgtaccgcagtagcaac
agtgccaacgccaccatcattgatgtggatcccaacatggagtttgaccgaagctacaag
tcatatcaaccagatgagaaggactcttatgtgtctgagatcaaggaattgcaactggtc
ctttcagaggctaatgagagcttgagggggctacaggaacagctctcccaggagaggcag
ctgaggaaagaggaagcagagaacttcacccagaaaatttgccagctgaaggaagatcac
caaaaagctctcctgaggcgagaatttgagctgcagagcttaaatcttcagaggaggcta
gagcaaaagttctggagccaagagaaaaatcttctggtacaggaatcccaacaatttaag
cagaacttcttacttcttttcatgaagctgaagtggtttctgaagcattggcggcagggg
aagatcctacagaatgaaggcaatgacttcttggaggtgaacagcatgaaagaactctac
ctgctgatcgaagaggaggagatgaacccccaacagcaagcagataacaagataagcact
agagacacctcgtctcagaacacgcccaatgaatatattaagactctgtcagatatgaag
gtaatcttgaaggagctctgcacagagctgcgagaagaaaggagaggaatgaatgagttg
caacagcagtttgccaaggccaaggcgacctgggagatggagaaaactgagcttaagtgt
cttattacacagctggaatctaagactgggaaaggccttacagagcgagcactctctgac
tggaaaacagctctgaagagggaacgagaggagcatcagcacctcctggctgagtcatac
agtgctgtcatggacctaacgaaacagctgcagataagtgagaagaactgggaccaggaa
aagctagagctcctgggtcgtttcaaggatgaacaacagcaagcagagcagcaagtgcgg
gagctgcaaaacaaaatcaaccagctgcagaagggaactgaccgatgggctctgaaaaac
tctgaaatggagaagcatggtagtagctggaaagagaccctcaatgagaaaatcactgac
aaagaaactgtttctgaagtggacatgaaagcaagcagcttaaaacggacaaagtcagtt
tcctcaatgtctgaattcgaaagcttgcttgagtgttcgccttaccttcctggcaaaacc
agtcctgataatggtcggagcaagaaggggcctactgctacacaggtgttgcctgccact
ttaaaggactctacagggctcaccccccaaaactgtgcctatgcgaacagtgaacgactt
ccctctgagaccctgaccacagagaagctggatgtctcagcatgtgattgcactcagaca
agcagcttctctttccaggaccagactcaaaagcatatgcagaggagctatacagcccca
gacaagactgggattcgcatatactatagtcccccagtggttcgcagactggaaccaccc
ctggtccataatagagaggggaagacaatggttgagcctggtttcctgttcacaatggcc
aagcccaaagaagagtcagataactcagagagcatatacagccagtggctttgcaacttc
tccaagcaacaccgcgagctgctggatagtggtactgtgagtgagaaagtggtgcctcct
gtccccagattgccaccctccttgcatgaccttgaaatctctggcaatatgagtgatgac
atgaaggagatcaccaactgtgttcggcaagctatccgctccagctctctggagaggaag
attaagagcacttctagccagactgtggggttaaccagcgttggtacccaaactatccag
actgttagcattggtttgcagacagacatgcccagaggcagcatccacagcagcaagagt
tggtccccacgaagttcttcccttatgtctgtacgcagcaagcagatctctacgtcttta
gacaaagtccactctaggattgaacggccttgttgctcccccaagtatggttcccccaaa
ctccaaagaagatcatcttctaagctggacaactccaaagaccgaagtctttggaacctc
catcagagtaagcaaaatgggtctgcttgggctcggtccaccacaaccagagacagtcca
gttctcagcaacatcaatgatggcctgtccagcttattcaatgtggtagaacattctggg
agcactgagtccatttggaagccaggatgtcaggaaagcaaagcaaagccagaagctcct
aagtatggaattgtccaagagtttttccgaaatgtgtgtggaagaactcaaagccccact
ttggctcttgagaagaaagacctagttggtgtagacaacagcagcaaaaaatcagataat
tcatccacagctgtgccccagcagtttgaaaacacctccaaggtccttgacaaaaaaccc
ttgaagcagagctgcagtgaagaaccaaagctgtcaattccaaaccaaggtggcaaggac
agagccttaaaagagccagacatcatctctgctgctattgccaatgaggatgttgcctgt
gactgcagctcccagtcactgacctcctgctttgctcggccatcacggtctgctgtccgc
cactccccttccaaatgcaagttgcacccctctgatggcagccggatggaagaaaaagca
gggtccccaagtgagtga
DBGET
integrated database retrieval system