Sceloporus undulatus (fence lizard): 121928454
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Entry
121928454 CDS
T07740
Symbol
SPIDR
Name
(RefSeq) DNA repair-scaffolding protein isoform X1
KO
K22806
DNA repair-scaffolding protein
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sund03400
]
121928454 (SPIDR)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121928454 (SPIDR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4503
DUF4502
TTR-52
Motif
Other DBs
NCBI-GeneID:
121928454
NCBI-ProteinID:
XP_042319116
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Position
4:193986465..195314886
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AA seq
973 aa
AA seq
DB search
MKHWQIRLYDEGGLPSPLWILVELNVDRKRVCCTEFASFPDERPVREGKRNAGPPVAAAS
ISSAWLRCGDGFQTASSLEAKESSEKSSRAKMCFTSLLSSVEGISKSERSSECTDIVWSS
SGSEFSDDENRTLTSRFPGLKIEKCRKYDLIYRDECSEGELQVIDWENDSDCEDHVEQPS
GSKTDDIPLEISDTDSCTSSNFMLEKKKEDEPKKARSIEISEYSSDSENFEECQVESEAA
NLDFPQKNQFRFGAETETDIGRSASDWLKSAQTLLQTPKKKIIKSLKTPEDSAKKRKLLR
GGLAERLNTLQNRERTAISFWRHQCNSDGQTLSGNKSGVLIVKILEMHEECTLCIALCHH
LAQTTSDTSSAKEIADIQPKLKVLFAKETAAHLKAALNDVVHIHPPWQKLVLLNETIPVI
MNTYFSQKAILKKPADMERTYFQEPLLNKRNMSLVRIFSLSDVKENWSQASAVNQVSCLH
MKNSKAEHAHSNNELRLSLFAVTTLSDSLLDIVETEGTAGGKGIQVQVVVQRVYYLVAKE
SSRCHLQRNNLSQNMAPWLNSDLPNVRLCILVQDTYGMFSEIQFQVPFSSPEPIEEYSKR
WEGKHSRLSGMKILQRVVRGKVLGLFSLIDSLWPPRLPLKVPGRSQENDMITADMPPPSF
CYILIASSDQRHIEVDEGEQISNLYFPPAVQCLKDILQTYNLYQCCSFWAHVLYRRLQEK
GNPLSSQTQCWLFVTDLSLQSGAEVSPGTPKVLPVSVASSCVIDGGVKEALKSTSPCVVF
FKDAVYGNGRIICIERTVLLLQKPLLCRAADADITKLTGPVELDELDSATQVNSICTVRG
IVVGVNEKTAFSWPTCNRCGNGNVEQHPQDRELLYCSQCCEAIISPVIKMHLEVFVHCQS
RPSSTVKIKLLQKTISSLLDSSTTEDGSYEVKNVLGKEVGFLYCYVQSVTNHPSSCIGLE
EIVLLDAGRKERK
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgaaacattggcagatcagactgtatgatgagggtggcttgccgtccccactttggatc
ctagtagagctgaatgttgatagaaaacgagtatgttgcacagaattcgcctcttttcca
gatgagaggcctgtaagggaagggaaaagaaatgcagggccacctgtagctgctgcttcc
atttcaagtgcctggcttcgttgtggtgatgggtttcagacggcttcttcactggaggct
aaagaatcttctgaaaaatcatctagagctaaaatgtgctttacctcattgctcagctca
gttgaaggaatttctaaaagtgagagatcaagtgaatgcactgacatagtgtggagctcc
agtgggagtgagttctcagatgatgaaaacaggactttgacttcaaggttcccgggtctt
aaaatagaaaaatgtagaaaatatgatttgatctacagggatgaatgcagtgaaggtgaa
ttacaagtaattgactgggagaatgacagtgattgcgaagatcatgttgaacagcccagt
ggatcaaaaactgatgacatccctttggaaatatcagacactgattcttgtacaagcagc
aattttatgttggaaaaaaagaaggaagatgaacctaaaaaggcaagatctatagaaatt
tcagaatactcatcagatagtgaaaatttcgaagaatgccaagttgaatctgaagctgct
aatttagattttcctcagaagaaccagttcaggtttggagcagagactgaaacagatata
ggaaggtcagcaagtgactggttaaaatctgctcagacccttctgcagacacctaagaag
aagataattaagagtttaaaaaccccagaagattctgccaaaaaaagaaaattactaagg
ggagggctagcagagagactgaatacactgcagaatcgagagaggactgctattagcttt
tggaggcatcagtgtaattctgatggtcaaacactttcaggtaataaatctggtgtactg
attgtaaagatcttagaaatgcatgaagaatgtactctctgcatcgcactctgccatcat
ttggcacagaccacttctgatacctcttctgcaaaagaaattgctgacattcagcctaag
cttaaagttctctttgcaaaagaaacagcagctcatctcaaggcagctctgaatgatgtt
gtacatattcatcctccttggcaaaaacttgtcctcctaaatgaaaccattccagttatc
atgaatacttatttcagtcaaaaggccattcttaaaaagccagcagatatggagaggaca
tattttcaagaacccttgctgaataaaagaaatatgtctttggtccggatattcagttta
tctgatgtaaaagagaattggtctcaagcttctgcagttaatcaggtgtcttgcctgcat
atgaagaattccaaggctgagcatgctcatagcaacaacgaactcaggttatccctgttt
gcggttactactttaagtgattctcttcttgatattgtggaaacagaaggaacagctgga
gggaaaggaatccaagtccaagtagttgttcaaagggtgtattacttggttgctaaagaa
agttcaagatgtcatcttcagagaaataatctttcccaaaacatggctccatggttaaac
tcagatctgccaaatgttcgattgtgcatccttgttcaggacacctatgggatgttcagt
gagatacaatttcaggttccattttcttctccagaaccaatagaagaatatagcaaaaga
tgggaaggaaaacacagccgtttatctggaatgaaaattttgcaaagagttgtcagagga
aaagtgctggggctttttagcctaatagacagtttatggcctccacggctgcctcttaaa
gttcctggccgaagtcaagagaatgacatgattacagctgatatgcctcctccaagtttc
tgttacattcttattgcttcttctgaccaaagacacattgaggtagatgaaggagaacag
atttcaaatttgtattttcctccagctgtgcaatgtctgaaggatattcttcagacgtac
aacttatatcagtgttgcagcttttgggcacatgttttatatcgaagactgcaggaaaag
gggaaccctctgtcaagccaaacacaatgttggctgtttgtgactgatctctccctgcag
agtggggctgaggtcagtcctggaactccaaaagttctgccagtctcagttgcttcatcc
tgtgtaattgatgggggagtaaaggaggcactcaagagcacatccccctgtgttgttttc
ttcaaggatgctgtatatggaaatggtaggattatttgcattgaacgtaccgttctcttg
ttacaaaagccccttttgtgtagggctgctgatgctgacatcactaaactgactggtcct
gtcgaactcgatgagctggattctgcaacccaggtcaattccatttgtactgtaagaggc
attgttgttggagttaatgaaaaaacagctttctcctggcctacatgtaacagatgtggc
aatggaaatgtagaacaacatccacaagacagagaattgctatactgcagccagtgttgt
gaagccatcatttcaccagttatcaagatgcacctggaagtctttgtgcattgccagtcc
cgaccatcgtccacagtaaaaatcaagctgctacaaaagaccatttcttcacttctggac
tcttctaccactgaggatggaagttatgaagtgaagaatgtgctgggaaaggaggtgggg
tttttatattgttacgtccagtctgtaaccaaccacccatctagctgtattggattggaa
gaaattgttctcctagatgcaggaagaaaagaaaggaaataa
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