Sceloporus undulatus (fence lizard): 121928517
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Entry
121928517 CDS
T07740
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sund04515
]
121928517
Cell adhesion molecules [BR:
sund04515
]
Cadherins
Protocadherins
121928517
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
SAMP2
Motif
Other DBs
NCBI-GeneID:
121928517
NCBI-ProteinID:
XP_042319290
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Position
4:complement(135180347..135182943)
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AA seq
809 aa
AA seq
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MKDSFRIKQGLYLLLLFSVTDILCVSIHYSVPEEKKSGSLVANVLKNLKLGIGELSARRA
QLVSKSSKQYFLLDNHSGNLLLNEKIDREALCGQTEPCLLLSQIVLQNPLKIYNIEIKIE
DVNDNAPKFSKDDFRLEIPEIVPPNTRFPLESAQDEDLGENSIQNYTLSPNEHFCLSVEN
NIDGNKYVELILEKPLDREKEAHFGLTLMAVDGGVPQRTGTIQININILDNNDNFPQFIQ
SEYKVKLKENSPRDTLVSKVEARDLDFGSNAHITYSFHRAPGKIYNLFHLSEMTGEITVL
GEIDYEKETSYDMIIKATDGGGLSGHCKVLIEVEDMNDNAPEVSVISNNSPLPEDSPLET
LVVLFSITDKDSGENGKTLCSVDMNLPFVLKMTGNHFYQLVIQSPLDRERIPEYNVTITV
MDRGSPRLTSTRIIHIQISDVNDNPPVFKKSLFEMQIQENNIPGLLIGSVSAVDLDVEQN
AKLSYSVLSGEVGGGPVASYISINSETGNMYVLRSLDYEEIKDFKATVRATDSGIPSLSS
DVIVHVTITDENDNTPFFLYPLQNSTSPCNELLPKMAEAGYLVTKVVAVDGDSGQNSWLS
YELLKATDPGLFYIGAQNGEVKTRRPLTERDTNKQKLVIAVKDNGVPPQTSTATLSVLLV
DGFSDPYLKVVDVHQQEHEDEGTLTMYLVICLASVSFVFLLCIVSFVAIKMCTRDPRGSF
IAAPPHFPPARPDIPENCTDSQSGSLSRNYQYDVCLTGGSLSSEFRFLRPLIPVFSVADP
HMPVNHKTSSGSQEVPECLDDNKSREQVK
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgaaggattccttcaggatcaaacaaggtctgtatctcttacttttgttctctgtgact
gatatactgtgtgtttctatacattattctgtgcctgaagaaaagaaaagtgggtctctg
gtggctaatgtattgaagaatctaaaattgggaattggggagctttctgctcgcagagcc
cagctagtatccaaaagctctaaacagtatttcctacttgataaccattctgggaatctc
ctcctaaatgagaaaatagacagagaggctttgtgtggacagactgaaccttgcttactt
ctttctcaaattgtgcttcagaatcctctgaagatctataatattgaaataaagatagaa
gatgtaaatgacaatgctcctaaattctcaaaagatgacttccgattagaaattcctgag
attgttcccccaaatacaagatttcccttggaatcagcccaagatgaggacctgggagaa
aacagcatccaaaactacaccctcagccctaatgagcatttctgcctgagtgtggaaaac
aatattgatggaaacaagtatgtggagcttatcttggaaaaacctctagacagggagaaa
gaagcacactttgggttgacacttatggctgtggatggaggggtaccacaaagaacaggc
acaattcaaattaatattaatattctggacaataatgacaacttccctcaatttattcag
tctgagtacaaagtaaagttaaaagaaaatagtcctcgagatactcttgtctccaaagtg
gaagccagagatttggattttggttcaaatgctcacatcacgtactctttccatcgagca
cctggaaaaatatataatttgtttcatttgagtgaaatgactggagaaatcactgttttg
ggtgaaattgattatgaaaaagaaaccagctatgacatgatcatcaaagcaactgatgga
ggaggcctttctgggcattgcaaagtcctgatagaggttgaggacatgaatgacaatgct
cctgaggtgtcagtcatatcaaacaacagccctttgccagaggattctcccctggagaca
cttgttgtcctcttcagtatcactgataaagactctggagaaaatggcaaaactctctgt
tctgtggatatgaacctgccctttgtattaaaaatgactgggaaccatttttaccagctt
gtgattcaaagtcccctggatagagaacggatccctgaatataatgtcaccatcactgtc
atggacaggggctctcctaggctcacttcaacaagaattattcacattcagatctcagat
gtcaatgacaatcccccagtatttaaaaagtcattgtttgaaatgcagatacaagaaaat
aatattccaggactgctaattggctcagttagtgctgttgatctagatgtggagcagaat
gccaaactatcctactcagttttatccggggaagttgggggtggccctgtggcttcttac
atctctatcaactctgaaactggaaatatgtatgtccttcgatccctggactatgaggag
ataaaagatttcaaagccactgtgagagcaactgatagtggtattccttcactgagctca
gatgtgattgttcatgtcacaatcacagatgaaaatgacaacactcccttcttcttgtat
ccccttcagaacagtacatcaccctgcaatgagctgctccccaagatggcggaggctggt
tacttggtcaccaaagtggtggctgtggatggagattctggtcaaaactcttggctctcc
tatgaactgctgaaggccacagaccctggccttttctacataggagcccagaatggagaa
gtgaaaaccaggagaccactaaccgaacgagacacaaacaaacagaagcttgttattgct
gtcaaagacaacggtgtccctcctcagaccagcactgcaacactcagtgtactactggta
gatggtttttctgatccttatctgaaggtggtggatgtgcatcaacaggagcatgaagat
gaaggaactttgaccatgtacttggtgatctgcctggcatctgtctcttttgtgtttcta
ctttgtatcgtttcctttgttgctatcaaaatgtgcacaagagatcccagaggcagtttt
attgctgcccctcctcactttccccctgccaggcctgatatcccagagaactgtacggat
tcccagagtgggtcactttccaggaattatcagtatgatgtttgcttaaccggtggatcc
ttaagcagtgagttcagatttctccgacctctcattcctgttttttctgtggcggaccca
cacatgcctgtgaaccacaagacctcttctggttcccaagaagttcctgagtgtttggat
gacaataaatcaagagagcaggtgaagtaa
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