Sceloporus undulatus (fence lizard): 121928587
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Entry
121928587 CDS
T07740
Symbol
RTTN
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sund03037
]
121928587 (RTTN)
Cilium and associated proteins [BR:
sund03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121928587 (RTTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
Motif
Other DBs
NCBI-GeneID:
121928587
NCBI-ProteinID:
XP_042319433
LinkDB
All DBs
Position
4:184075539..184185143
Genome browser
AA seq
2281 aa
AA seq
DB search
MWVGAEMAGSAASPELSLAPLIRKLRHQLAEIRERALKNILCKIDHCLVAYADLVQEKLL
FLNLLEWFNFPVVPMKEEVLNLISNLVKHPLAVEQFVGIGGVEFFSQLRPNVDPNLQDVI
DRILDGLFVLPSEMSSDYHAVPHQAQPCSTLGNPILSQDAHVGYFEQRKSHLQETEVPPK
QQSVKHGVKCLKFSTFPWLSLTTTDRHVLSSSESSLRSKSHRLIWNTCELLQDVIMQDFP
AEIFLQRPKIVQSLLSLTTLALGRDGQYRLALQGVLCLEQLCVFLRNRLNFHRDPSFLSS
DTGAVSQNSSVSYCQDARRLSHSQNPSPGGSSPRPSVIGRTGQRPRGDGQDWDAASSSGS
SSHVNVNSRISVQSPLDIGHIDLPELESEDTLELQFLQLSLPQFCVAILEYVVPLLRTGS
RRVTMKVLELLTEDLLLIVDAVSEDVWEDSSLFGLELKEKLLGILDSLGDTILYHKNNAD
SEQPKLIVHHRITFLSISLFTVRLLQTLLPVEKASSVLPESLLIALFEISIDMPFSLEYP
NIHESVVAYLEQMNSENYSIYKQAAEAAYSIECSCNFMMDVRKEGEKNFIDLLELAEQAL
KSLPYHQYFNFLQEFINICSDIWKSAQANPVLQAESQKVLLHLLSHPMSNIRTESYRSCL
KFVKECLGIHNAIKPISSVSYGIHFLLHPKLLYEICSFGLQDSQNEVRSAAMFILMYLLQ
GRLMMTVVTWNKFIEALCPVVPVLQGYADTEERLGNCILTLSETTAEKEGILPRTARLRA
ALRLLFSRKPLVRSMALKHLMFHLTVEEKGNLKRPLLHGSVLSSIPNILIVEKPIELKLG
DARESVFKAETVEKLYEIFISDTIDLVLRKSAAEQLAVIMQDSKMHDIIKKLGAIDKILA
YCGECIDQDGKIMDCMMLPCLTLLRKLVYADPVKRLSLANQPSVLFMLFRVALIFQDYSA
VVSEVAALLCLLLFDEAARKEMWADSFSCDPYNTPPFSLPVAIVRRYHLPIRVSSHHAVS
PNSVVLPFSCELWASKHVSDMLKMAWNLSWFGGTDNLLKLTNYEMETKEFVDTFKLSSED
LITLKITHTTSGLQDCLNSIIQAVSHREVRDAVTTMNFYILNDRLVLMCSSGSCGATLKC
LAWQTALSRFLQVLPASSEDEKLLVDVINFLNKLLKEQKSTSEVTHLKWILDIVLKHNQK
SLLDLVVQPESQIQDETDDLKIPVKQQLQKELIAFFNTLLVSFMTVTERKDIELTGYFRT
ELALKLLQYLRVTDAPHFYGLPSLERTLRGMVHVTALPGWSSYSVTMESFTICKKYLAGL
LEVISSFYVEWGGNAMSFMGKGVTKSAILCLLHLSHEMMAKAPNLDWVSLWFLPYDGREE
QSLSRQGLAWLIPLWVDRDPEVKFTSLAIGSALTSVEAGCFALAESCRNISGGLWGTVIN
ILLDKSECSMVRREAAFILQNLLVIPLSSEEVKDTIWQGPCVHDEESGVSLTGKPALLAL
LYHCHFYEHLSEMVKECYLGRYTFDLHCSLGDSLATGKNSLNDLDESISFWRIQTNESQS
ASSHSTSDTVIISSSPSLGCVSEVPAPTSPPLGIIRDVPVNRFMAQGQSDTTTTASSLRD
SQQSVISSHQCTVVTPPLLSAVCSLLDNLLIVTPKDTGIALQRSHILTALSSLVNAGLIE
RCILEMKAPLPQPSHEEYAKIQILSLLQFISSLSQLLQSCLLIDTCLVMQDELLMPLLEN
TFVVLSLHSKDGLDSELSAAVHQTWKDLFSFLAILLRKCGHTSLPFVAAALAKHWTSVID
TICESVCLAATHPDLYVACLQFLAILFSEEGMRELCNKEDASYHPTMAFLLDDDVKSQLS
VMKLCELIIQSYEGKSFEDVLSRVAASTLLPLLAVSKTAQKCALEANLVETCLEQMKHIH
AQLNLDSLRPGKAVQRKKDDNLSKELKLIMQLLRNCFFRNEACKAAALGTHLVFVLHSLW
PWLLMDDSLMQTTLHLLCVYSANFPPGCGSLCTASSGLSPLQTAQRTAAGNSLMHSIVKL
ASQTLTENCVIQQMTFNLLANLVVSHDCKNILQKQGSGWDKALPLSVLFHQQTDQKCEPV
IFCPSVLNNFLQNFLSLSLPKGGNKSLSALSVAWLKLLLNLSFGEDGQQMIMKLNGSLDQ
LIEMAKYKHRSNPYMILLILHNTCFSPANKPRILANDKAVALLSACLESDSPVSQRIGAS
ALWALLHNYQKAKVTLKNSSIKRRIDEACISVKKTLQMGQESQQDVYHLKCLENLVQLLS
S
NT seq
6846 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcggagcggagatggccggctctgctgcctctccggagctctccctggcgccc
ctgatccggaaactccgtcatcagctggctgagattcgagaacgagctcttaagaacatt
ttgtgtaaaatagaccactgcttggttgcatatgctgatctggtacaagaaaaattgcta
tttctcaatcttttagagtggttcaactttcctgtagtgccaatgaaagaagaagtctta
aatttaataagcaacttggtaaagcacccattggctgtggagcagttcgttgggattggg
ggagtggagtttttctcccaactgcgtccaaatgtggacccaaatctacaggatgtgatt
gataggattctggatgggctgtttgtgctaccttcagaaatgtcttctgattatcatgca
gtgccacatcaagcccagccctgctcaacattgggtaatccaattttgtctcaagatgct
catgttggatacttcgaacaaaggaaaagtcatctacaagagacagaagtcccaccaaag
caacaaagtgtcaaacacggagtgaaatgtctgaagttttctacattcccttggttatct
ctgaccacaacagatagacatgttctttcatcaagtgaaagttcattgagaagtaagagt
cacagattaatttggaatacctgtgagctgttacaagatgttatcatgcaagactttcct
gctgagatctttcttcagagacctaagattgtacagagtctcctgtctctaactacactg
gctcttgggagagatggacaataccgtttagccttacagggtgtcctatgtctggaacag
ttatgtgtcttcttaagaaacagactgaacttccatagagatccaagttttctttcaagt
gatacaggtgctgtttcgcagaattcttctgtgtcatactgtcaagatgccagaagactc
tctcattctcagaatccatcacctggaggtagtagtcctcgaccatctgtgataggacgt
acaggtcagcgtcccagaggagatggtcaggattgggatgcagcatcttctagtggaagc
agttctcatgttaatgtaaattccagaatatctgtccagtcacctttggatattggccat
attgacctgccagaactggagagtgaggacactttggagttacagtttctacagcttagt
cttcctcagttctgtgtagctattttggaatatgttgtgcctcttctaagaacaggcagt
aggagagtgaccatgaaagttttggaattgctcactgaagaccttctgcttattgttgac
gctgtgtcagaagatgtttgggaagacagcagtctctttggattggaacttaaggagaag
ctgcttggaatcctagattcattaggtgacaccattttgtaccacaaaaataatgcagat
tcagagcagcccaaactgatagtgcaccacagaataacgtttctcagcatttcacttttc
actgttcgactgttgcaaacccttcttcctgtagagaaggccagcagtgttttaccagag
agtttactgattgccttatttgaaatttctatcgacatgccattctctttggaatatcca
aatattcacgaatctgttgtagcttatttggagcaaatgaattcagaaaattacagtatt
tataaacaagctgcagaagctgcctattccattgagtgttcctgtaacttcatgatggat
gtccgcaaagagggagaaaagaattttattgatttactggagctagcagaacaggcctta
aaaagtcttccataccatcagtactttaattttcttcaggaattcatcaatatttgctca
gatatttggaagtctgcccaagcgaacccagtgctgcaggctgagagtcagaaggtgctt
ctccatctgttgtcccatcctatgtcaaacatacgaacagaaagctatcgctcctgcctc
aaatttgttaaggaatgtttaggcattcataatgccattaagcctatctcttcagttagc
tatggaatacatttcttgcttcatcccaaacttctctatgaaatctgtagttttggcctt
caagactcccaaaatgaggtacgctcagctgccatgttcatactgatgtatcttcttcag
ggacgattgatgatgacagtagtgacctggaacaagtttattgaggccctctgtcctgtt
gttccagttcttcagggttatgctgacacagaagaacgtctggggaactgtatcctcaca
ctgagtgaaacaactgctgaaaaagaagggatcctgccaagaactgctagactcagggct
gcactgcgccttctcttttcaaggaagccattagtccgttccatggcactcaaacactta
atgtttcatcttacggttgaagaaaaggggaacctaaagcgcccactactccatggcagt
gtcctttccagcattcctaatatacttattgtggaaaagcctattgaactcaagctaggt
gatgcaagagaatctgtttttaaggccgagacagttgaaaagttatatgagatctttatt
tctgacacaattgatctagttttgagaaagtctgctgctgaacaattagctgtaattatg
caagattctaaaatgcatgacattattaaaaagctgggtgcaatagacaaaatacttgcc
tattgtggtgaatgtattgaccaggatggcaagattatggattgtatgatgttgccatgt
cttaccctcttacggaaacttgtctatgcagatccagttaagcggctgtcattggccaat
caaccttctgtcttgtttatgttatttagagttgccttgatatttcaagattatagtgct
gttgtgagtgaagtagcagcgttactttgtctactattatttgatgaagcagcaagaaaa
gaaatgtgggctgattctttttcctgtgatccttataacactcctccttttagcttgcct
gttgctattgtgagacgatatcatctacctatcagagtctcttcccatcatgctgtgagt
ccaaactcagtggtcttaccattttcatgtgaattatgggcctctaaacatgtgtcggac
atgcttaaaatggcttggaacttgtcttggtttggtggaactgataacctactaaaactc
actaattatgagatggaaaccaaagaatttgtagacacattcaagctgtcctcagaggat
cttattacactgaagataacacacacaaccagcggactgcaagattgtcttaattccatc
attcaagcagtgtcccacagggaagttagggatgctgtcacaacaatgaatttttatatt
ctgaatgacagactggtattaatgtgcagtagtggctcttgtggggccactttgaagtgc
ttggcttggcaaacagcattaagcaggtttcttcaggtacttccagcttcttcagaggat
gaaaaactcctagttgatgttataaattttctaaacaagctgcttaaagaacagaaaagt
acatcggaagtaacacacctaaaatggatcctggatatagtcctgaagcataatcaaaag
tctttactggatcttgtggtgcagccagaatctcagatacaagatgaaacagatgaccta
aagattcctgtcaaacaacaattgcagaaagaattaattgctttctttaatacacttctg
gtcagcttcatgactgttactgaaagaaaagacatagaacttactggctatttccgaacc
gaactggcactgaaacttttgcagtatttacgagtaacagatgctccacacttctatggc
ttaccttctttggaaagaacattaagagggatggttcatgtcactgcactcccaggctgg
agttcatactcagttacaatggagtcattcacaatttgtaaaaaatacttagcaggactt
cttgaagtcatctcatctttttatgttgaatggggaggaaatgccatgtctttcatgggg
aaaggtgtcacaaagagtgccatcctttgtttgcttcacttgtcccatgaaatgatggct
aaggccccaaatctggactgggtatctctatggttcttgccatatgatggcagggaagag
cagtctctttctcgacaaggcttggcttggttaattccattatgggtagatagagacccg
gaggtcaagttcacttcacttgcaattggatcagcacttacatcagttgaagcaggttgc
tttgctttagctgaaagctgccggaacatatctggaggtttgtggggaacagtgattaac
atccttctggacaaatctgaatgcagcatggtcagaagagaggctgcgtttattcttcag
aatcttttggtgatcccattgtccagtgaagaggttaaagacaccatttggcagggtcct
tgtgtgcatgatgaagaatctggtgtatctctgaccggaaaacctgccctcctggctctg
ttatatcactgccacttctatgagcatttgagtgagatggtgaaagagtgctatctaggt
cggtatacatttgatctgcattgttccttgggagacagcctggcaacagggaagaatagt
ctaaatgatcttgatgagtctatttctttttggagaatccagactaacgagagtcaatct
gcaagttcccattcaacatctgacactgtgatcatttcatcatcaccatccttggggtgt
gtttcagaggtaccagcacctacatcaccacctctaggtattattcgtgatgtgcctgtt
aatcgattcatggctcaaggtcagagtgacacaaccacaactgcttcaagtctacgtgat
tcccagcagtctgtcattagttctcatcagtgtacagtggttacaccccctctcctgtca
gctgtttgcagtttactggacaacctgctgattgtcactccaaaagatactggaattgct
cttcagcgatcacatatactaactgctctcagtagtcttgtaaatgcaggtttgattgag
agatgtatcttggaaatgaaggcacctttgcctcagccatctcatgaggaatatgcaaaa
attcagattttgtctctactgcagtttatttcatccttgtctcaactcctgcaatcatgt
ttgttgatagatacttgtcttgtgatgcaagatgagttactgatgcctctcttggagaat
acctttgtagttctttcccttcactctaaggatggcttagactctgagctatcagcagca
gttcaccaaacttggaaagacctattcagctttttggctatactgttaagaaaatgtggc
catacctctctaccatttgtggctgcagcgcttgcaaaacactggacttctgtaatagat
acaatttgtgaaagtgtatgtctggcagccacacaccctgacctgtatgtagcctgctta
caattccttgccattctcttttctgaagaaggaatgagagagctgtgcaataaagaggat
gcatcctaccacccaaccatggcttttcttttggatgacgatgtgaaaagccagttatca
gtaatgaaactctgtgaactgataattcagagctatgaaggaaaatcctttgaagatgtg
ttgagccgagttgctgcaagtactttgcttccccttttggctgtcagtaaaactgcccag
aaatgtgctttggaagctaaccttgtagaaacttgcttggaacagatgaaacacattcat
gcacaactgaacctagattccttgaggcctggaaaagcagtccaaagaaaaaaagatgat
aacctcagcaaagaattaaaactcatcatgcagctcctaagaaattgcttctttcgaaat
gaagcctgtaaagcagcagcccttggaactcaccttgtttttgttttgcattctctatgg
ccatggcttttaatggatgactcactgatgcaaacaactctgcatttgctttgtgtctac
tctgcaaactttcctccaggctgtggttctctttgtacagcaagtagtggattgtctccc
cttcagacagctcaaagaacagcagctggaaactcactaatgcacagcattgtgaagtta
gcttctcaaactctaactgagaactgtgtcattcagcagatgacctttaatctgctggct
aacctagttgtgtctcatgactgtaagaatattcttcaaaagcaaggcagtggatgggac
aaggcacttccactgtctgttcttttccatcaacaaacagatcagaaatgtgaaccagtt
atcttctgcccttctgtcttgaataactttttacagaactttttatcactgtcattgcca
aaaggaggtaataaaagccttagtgcactatctgttgcttggctaaaactgcttttgaat
ttgtcatttggagaagatggacagcaaatgattatgaagctgaatggtagtttagatcag
cttatagagatggccaagtacaaacaccgaagtaatccatatatgatccttctgattttg
cacaacacttgctttagtccagccaataaacctaggatactagcaaatgataaagcagtt
gcattgctatctgcctgtctggaaagcgatagccctgtatctcaaagaataggagcatct
gcactttgggctttgcttcacaattaccagaaggcaaaagtgactttgaagaattcatca
ataaaaagaagaatagacgaagcttgcatttcagtgaagaaaactcttcaaatgggacaa
gaaagccagcaggatgtctaccacttaaaatgtctggaaaatcttgttcagcttctcagc
agttaa
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integrated database retrieval system
