Sceloporus undulatus (fence lizard): 121928616
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Entry
121928616 CDS
T07740
Symbol
ABCA4
Name
(RefSeq) LOW QUALITY PROTEIN: retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121928616 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sund02000
]
121928616 (ABCA4)
Transporters [BR:
sund02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
121928616 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_22
AAA_23
Motif
Other DBs
NCBI-GeneID:
121928616
NCBI-ProteinID:
XP_042319490
LinkDB
All DBs
Position
4:109659439..109781062
Genome browser
AA seq
2327 aa
AA seq
DB search
MGFLRQVRLLLWKNWTLRKRQKLRLLVELLWPLSLFLVLVWLRSVNPVYRQHECHFPNKA
MPSAGTLPWLQGIFCNMNNPCFRSPTRGESPGVVSNYNNSILARAYQDAQELLLGSREIE
LGRLWEELRTLTQFMETIRTNPERIAGKGIRVQDILKDGENLTKFLLEDVGLPDLVVYHL
LNAQVRPEQFAFGVPDLTLKDIACSETLLNRFIIFKSSSGFQVVHSTMCALSQEALQKVE
DSLYANVDFFKLFHLLPTVLDSNTQGVDLRSSGRILSELSQAVQELIRRPSVQDLLTTLQ
PLLQDGQPTSLRQLMSTLSNLLCGYPEGGGSRILSLNWYEDNNYKAFLGVDGTKKESIYY
YDNATTPFCNTLIQTMESNPLTKIAWRAVKPLVMGKILFAPDSPAVRRILKNANSTFEEF
ERFHLFARAWKEVGPQVWYFFQDSVQMNMIRDTLQNPTVKGFLNEQLSSEGFTVEDVIDF
LSNAPPEERNEGTVNFNWRNIFNVTNQVLHVVHQYLECLTLDKFEGQADETEVADRALCL
LEENKFWAAIVFPDLDSTARELPPHVKYKIRMDIDAVEKTNKIKDRYWDPGPRADPVDDL
RYIWGGFAYLQDMIEHGIIKTQTGTEVPPGIYLQQMPYPCFVDDVFMVTLNRSFPIFMVL
AWIYSISMIVKSIVLEKEMRLKEAMKNRGVTNGVIWFTWFLDSFIMMAVSTFLLTALIMY
GNVLHYSNPHLLFLFLLTFTSASIMECFLLSTFFSKANMAAACSGVIYFTLYLPHIVCFA
WQDRLTANIKIMASLLSPVAFGFGTEYLSRYEEQGLGLQWDNIGNSPLEGDQYSFLFSME
MMLFDAFMYGLLAWYLDNVFPGDYGIPLPWYFPLQQSYWLGSGHSKAEKTTTVDDKSSEK
EGNVDMKDEEEEMSQSLATEPNKGEDKTDSQKKDGKENKCKHKRKKECDQQGKPETEAKD
KDEIPTNVYFEEEPSGLVPGVCIENLVKIFPNCSKPAVDGMNITFYEGQITAFLGHNGAG
KTTTMSVLTGLFPPTSGTILVGGQDIQTHMDSIRQNIGMCPQYNILFNHLTVAEHIWFYA
QLKGKSREEAEFEMEMMLADIGLPHKRNEEAQNLSGGMQRKLSVAIAFVGDAKVIVLDEP
TSGVDPYSRRSIWDLILKYRSGRTIILSTHHMDEADILGDRVAIISKGKLHCSGSPVFLK
NSFGTGFYLTLVRKMKNIQTSGGNDGTSCSLGSKCSCPCSSCAPTDKAEALEQELDGDMN
ELNELIHHHVPEAKLIESIGQELIYLLPSKNFKQRAYASLFRELEETLADLGLSSFGISD
TPLEEVFLKVTAEADTETQNAGAQENGAVGQEEETHQNGHTANGTSRRPVALEGDGSGGK
GSQQNKGCQLFHQQMKALLVKRFHHTTRSFKDFLAQIILPSSFVLLALILTIIIPPFGEY
PSLTLQPWIYGQQFTFFSNEQPGSEEMVPLIDAFLNKPGFGNRCLKKEPLQNYPCMNTSM
AWKTPAVPYNVSALLRTKTWSTENPSPSCKCSTRRKLTMLPECPLGAGGFPPPQRVQRST
EILQDLTHRNISDFLVKTYPTLIRSSLKSKYWVNEQRYGGISVGGKLPVLHVTGEQIVNV
LRDLGQMMNITGGEATMAVSKEMSNFLKYMETEDNIKVWFNNKGWHAMVSFLNIASNAIL
RANLKQGKDPEEYGITAINHPLNLTKEQLSEVTVLTTSVDAVVSICVIFAMSFIPASFVL
FLIQERVTKAKHLHFVSGVSPFVYWFTNFLWDILNYTVSAGLVVAIFIGFKKKAYISPTN
LPAFVTLLLLYGWAIIPLMYPASCFFSIPSTAYVALSCINLFIGINSSAITFILELFENN
LPLLKFNKTLKSILLVFPHFCLGRGLIDLAMNQAVTDVYARFGEERVLNPFHWDFAGKNM
VALAVQGVAYFVLNLLXXXMQHNFFSTRWLPQKTMMPVIDEDEDVAEERQRIMNGGGKTD
ILKLQELTKIYARRHIPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTEVTSGDA
IVAGHSILTHICDVHQNMGYCPQFDAIDDLLTGREHLRLYACLRGVPAAEVERVAEWGIQ
KLGLLAYADQLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQSRRFLWNSIVSV
IRDGRAVVLTSHSMEECEALCTRLAIMVKGTFKCLGTIQHLKYKYGDGYIVTLKIKAPKP
GLPPDLSLAEHFIHLNFPGSVQREKHYNMLQYQICSYSLAKIFRLILSNKDSLHIEEYCV
TQTTLDQVFVNFAKQQMEDEEIPLHPRAAGANREVKVTPAFYRQATA
NT seq
6984 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcctcagacaggtcagacttctactatggaaaaactggacgcttaggaaacgg
caaaagcttcgtcttctggtcgaacttctatggcctttgtccttatttctcgtcctagtc
tggttgaggagtgttaatccagtctatcgccagcatgaatgtcacttcccaaacaaagca
atgccctctgcaggaactctgccatggctccaaggcatcttctgtaacatgaacaaccct
tgtttcagaagtcccacacgcggagagtcccctggtgttgtatctaactacaataattct
attttagcaagagcgtaccaagatgctcaagaactgttgctgggatcccgcgaaatagaa
ttgggccgactctgggaagagctacggaccctaacccagttcatggaaacaatacggaca
aatcctgaaaggattgcaggaaaaggaatacgagtccaagatatcttaaaagatggggag
aacctaactaaatttctgcttgaagatgtaggccttccagatctggttgtttaccacctg
ctgaatgcacaagtgcgaccagaacagtttgcctttggagtcccagacttgactttgaaa
gatattgcatgcagcgagaccctgttgaatcgctttattatcttcaagagttcaagtggc
tttcaagttgtgcacagcacaatgtgtgccctttcccaggaggccttgcagaaggttgag
gacagtctgtatgcaaatgttgacttctttaagcttttccatttgcttcccactgtttta
gacagtaatacacaaggcgtggatctgcgatcttcagggcgaattctttcggagttgtcc
caagcagtgcaagagctaatacgcaggccaagtgttcaggacctcttaacaactctgcaa
ccactcctacaagatggacagccaacatccttaagacagttgatgagtacattatctaac
cttctctgtggttacccagagggtggtggatctagaatactttctctcaactggtatgaa
gataacaattacaaggccttcctcggggttgatggcaccaagaaggaatcaatttattat
tatgacaatgcaaccacacccttttgtaacacactgatccagaccatggaatcgaaccct
ttaaccaaaatagcctggagagctgtgaaacccctggtgatggggaaaatcctctttgct
cctgattcacctgctgtgaggaggattctaaagaatgccaattctacatttgaggaattt
gagcgcttccatctatttgctagagcctggaaagaagtggggcctcaggtgtggtacttc
tttcaagacagtgtgcaaatgaacatgatccgggacactttgcaaaaccctacagtgaaa
ggtttcttaaatgagcagctgagttcggaaggttttacagtagaagatgtgattgatttt
ctctccaatgcgccaccagaggaaagaaatgaaggcacggtgaactttaattggaggaat
attttcaatgtcaccaaccaggttctgcatgtagttcaccagtacctggagtgcttaacg
cttgataaatttgaaggccaagctgatgaaactgaggtagctgatcgggccctctgtctt
ctggaggaaaacaaattctgggctgctatagtctttcctgacctggactcaacagccaga
gaactgcctcctcatgtgaaatacaagattcgtatggatatagatgcagtggaaaaaaca
aacaaaatcaaagacaggtattgggatcctggtccaagagctgacccagtagatgacttg
cgctacatctggggaggatttgcatatctgcaagacatgattgagcatgggattatcaaa
acccagacagggacagaagtgcctccagggatctacctgcagcaaatgccctatccatgc
tttgtagatgacgtcttcatggttactctgaaccgttctttccccatcttcatggtgctg
gcttggatctactccatttccatgatagtaaagagcatcgtgctggaaaaagaaatgaga
ctgaaggaagccatgaagaacaggggagtcactaatggagtgatctggttcacatggttc
ctagacagttttatcatgatggctgtgagcacatttctcctgactgcactcattatgtat
ggcaatgtgcttcattacagcaaccctcatctcctctttctgttcctgttgaccttcaca
tctgccagtatcatggagtgcttcttgctgagtacctttttctccaaggctaatatggca
gccgcttgtagtggagtcatctacttcactctctacttgccccacattgtctgctttgca
tggcaggatcgtctgactgctaacatcaagattatggcaagcttgctctcaccagtggct
tttggatttggcacagaatacttgtcacgatatgaagagcaaggacttgggctacagtgg
gataacattggaaacagccctctggaaggagatcaatacagtttcttgttttctatggag
atgatgctctttgatgcttttatgtatggattgcttgcttggtacttggacaatgtattc
ccaggagactatgggataccattgccttggtatttccctctgcagcagtcttactggctt
gggtcagggcactcaaaggctgagaaaacaacaactgtggatgacaaaagttcagagaag
gaaggcaatgtggacatgaaggacgaagaagaagaaatgagccaaagcttggctactgag
cctaacaagggagaggacaagactgacagccagaagaaggatggtaaagaaaacaaatgt
aaacacaaaagaaaaaaagagtgtgaccagcaagggaaacctgagacagaggcaaaagac
aaagatgaaattcctacaaacgtttactttgaagaagagccttcaggcctggttccaggt
gtgtgcattgaaaacctggtgaagatctttcccaattgctccaagccagcagtagatgga
atgaatattactttctatgaaggtcagatcacagctttccttggccacaacggagctggg
aagacaaccacaatgtctgtcctcactggtctgttcccacctacatctggaacgatatta
gttggtggacaggatatccagacacacatggactctatccgacagaatataggcatgtgc
ccacagtacaacatactgttcaatcacctaactgttgcagaacacatctggttttatgct
cagctaaaagggaagtccagagaagaggcggaattcgaaatggagatgatgctggcagac
ataggtcttccacataaaagaaatgaagaggctcaaaatttgtctggtggcatgcagcga
aagctgtctgttgccattgcctttgtaggcgacgcaaaagtgattgtcctcgatgaaccc
acttctggagttgacccttattccagacgttctatatgggatctcatattgaagtatcgt
tcaggtagaaccatcattctctctacccaccacatggatgaggcagacatccttggagac
cgagttgctatcatttccaaaggaaagttacactgttcaggatctcctgttttcctgaag
aactcctttgggacaggtttttatctcaccttagtccgcaaaatgaaaaacatccagaca
agtggaggaaatgatggtacctcctgcagcctgggatctaaatgttcatgtccctgctct
tcgtgtgcacctacagacaaagcagaagcccttgaacaagaactggatggcgatatgaac
gaactcaatgaacttatccatcatcacgttccagaagcaaagttaattgaaagtattggt
caggagctcatctaccttcttcccagtaagaattttaagcagcgagcctatgccagtctc
ttcagagaattagaggaaacattggctgacctgggactcagcagcttcgggatttcagac
acaccacttgaggaggtttttttgaaggttacagcagaagctgatactgagacacagaat
gcaggtgcccaggagaatggtgctgtgggacaagaagaggaaacgcaccaaaatggtcac
acagccaatggtacttctcggagacctgtggctctggaaggggatgggagtggcggcaaa
ggatcccaacaaaataagggttgccagctcttccatcagcagatgaaagcattgcttgtc
aaacgattccaccacaccactcgtagttttaaagacttccttgctcagattattctccct
tctagttttgtgctgctagcgctgatacttacaatcataattcctccatttggtgaatac
cccagtctgactctccaaccgtggatctatgggcaacagttcacttttttcagcaatgaa
cagcctggcagtgaggagatggttcctcttattgacgccttcttaaataaaccaggattt
ggaaatcgttgcttgaagaaggagcccctgcaaaactatccttgtatgaacacttcaatg
gcctggaagacaccagctgttccttataatgtctctgccctcttacgaaccaaaacctgg
agtactgaaaacccctcaccctcttgcaagtgcagcactaggaggaaactcacgatgctg
cccgagtgccccttaggagctggaggatttcctcccccgcagagagttcagcgtagcaca
gaaattcttcaggatctcactcatcgaaatatttctgatttcctggtgaaaacatatccc
accctcataagaagcagtttaaagagcaaatactgggtaaatgagcaaagatatggagga
atttctgttggaggaaagctcccagtccttcatgtcactggagaacaaattgttaatgtc
ctgagagatcttggtcaaatgatgaacataacagggggtgaagcaacaatggctgtctct
aaggaaatgtcaaactttcttaaatacatggaaactgaagacaacataaaggtgtggttt
aacaacaaaggctggcatgctatggtcagttttctcaacatagccagtaatgcaatcctg
agagccaatctgaagcaaggcaaagatcctgaagaatatggcataacagctatcaaccac
ccactgaaccttaccaaggagcagctctctgaggtcacagtactgaccacttcagtagat
gctgttgtttccatctgcgtgatttttgccatgtcgttcatcccagcaagctttgttttg
tttctaattcaagaacgtgtgacgaaagccaagcatcttcactttgtcagtggtgtgagc
ccttttgtttattggttcaccaatttcctttgggacattttgaattatactgtgagtgct
ggcctggtagtggcaatattcattggtttcaaaaagaaagcctatatctcacccaccaac
cttcctgcatttgttacattgctacttttatatggatgggccataattcctctgatgtac
ccagcatcctgcttctttagcatccccagcactgcctatgttgccttgtcttgcatcaac
ctcttcattggtatcaacagtagtgccattacttttatcctggagctttttgaaaacaac
ctgcctctgctgaaattcaataaaaccttgaaaagtatcctgttagtctttcctcatttc
tgtctgggccgtggactcattgacctagccatgaaccaagcagtgactgacgtatatgct
cggtttggagaagagcgtgtcttgaatccgtttcactgggattttgctggaaaaaacatg
gttgccttggcagtgcagggtgttgcatattttgttctgaatcttctgnnnnnnnnnatg
cagcataatttcttctctaccagatggcttccccaaaaaactatgatgcctgttatagat
gaagatgaggatgttgcagaggaaagacaacgaataatgaatggaggaggcaaaacagac
attttaaaattgcaagaattgaccaagatttatgcaagaagacatattcccgctgtagat
aggctctgcgtgggtgttcgtcctggagagtgctttggtctcctgggcgtgaatggagct
ggcaaaacaacaacattcaaaatgctgactggagatactgaagtaacatctggagatgct
atagtggctggccacagtatattgactcatatctgtgatgttcatcaaaacatgggctac
tgcccccagttcgatgctattgatgatcttctcacaggaagagagcacttgcgtctttat
gcatgtctgcgtggtgtgccagcagcagaagtggagagggtagctgagtggggcattcag
aagcttggtctcttggcatatgcagatcagttggcaggcacctacagtggtgggaacaag
cgcaagctctccactgccattgcactaataggttgccctccattagtcctactggatgag
ccaactacaggaatggaccctcagtctcgacgcttcttatggaactcaattgtcagtgtg
atcagagacggaagagctgtggttctgacttcacacagcatggaagaatgtgaagcactg
tgtacacgcttagccatcatggttaaggggacattcaaatgcctgggcactatccagcat
ctcaaatacaaatatggagatggatacattgttaccttgaaaatcaaggcccctaaacct
ggattgcctccggatctgagtctagctgagcacttcatacatctgaacttcccaggcagt
gtacagagggaaaaacactacaacatgcttcagtaccagatatgctcttattcactggcc
aagatcttccggttgattctctccaataaggacagcctacatattgaagaatactgtgtc
acccaaaccacactggatcaggtttttgtgaacttcgctaaacaacagatggaggatgag
gaaattcctctacaccctcgtgcagctggagcaaacagagaggtgaaggtgacccctgct
ttctatcgacaggcaactgcttag
DBGET
integrated database retrieval system
