KEGG   Sceloporus undulatus (fence lizard): 121928860
Entry
121928860         CDS       T07740                                 
Symbol
SOX17
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-17
  KO
K04495  transcription factor SOX17 (SOX group F)
Organism
sund  Sceloporus undulatus (fence lizard)
Pathway
sund04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:sund00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    121928860 (SOX17)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sund03000]
    121928860 (SOX17)
Transcription factors [BR:sund03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    121928860 (SOX17)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 Sox17_18_mid HTH_24 Dec-1
Other DBs
NCBI-GeneID: 121928860
NCBI-ProteinID: XP_042320073
LinkDB
Position
4:198771032..198775652
AA seq 362 aa
MSSPDAGYASSEDQGRCPLPAPVMMQCQWAECEGKGKGEAVGTAGDPGQPGTPGRAKGEA
RIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGQSWRALTAEEKRPFVEEAERLRL
QHMRDHPHYKYRPRRRKQVKRLKRGGGGGAEGGPEGSSAFLASQGPPHPLGLQGGEPGPL
CEGLGLAFSEPYAGGFPYRDCGPLSLPAFGGYNLPTPEPDSQSGACGEPAFFPAPSEEAS
GALLGPPYGYPTPPGAEYPCGGAPQQYPFFRGRFPVPLEPPPPSCRRGGEPPLEPLPAPD
VELLAEMDRAEFEQYLPSFAGRTPEMALPFPGHEGPDAAYYCPSASAGGGGGGGGGSAYP
EL
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgagcagccccgatgcgggatacgccagcagcgaggaccaaggccggtgcccgctccct
gccccggtcatgatgcagtgccaatgggccgagtgcgaagggaagggcaagggcgaggcg
gtggggacagcgggggatccggggcaaccagggacccccggcagggccaagggggaggcc
cgcatccggcgccccatgaacgccttcatggtctgggctaaagacgagcgcaagcggctg
gcccagcagaacccggacctccacaacgccgagctcagcaaaatgctggggcagtcttgg
cgggcgctgacggcggaggagaagcgtcccttcgtggaagaggccgagcggctccgtctg
cagcacatgcgggaccacccccactacaagtaccgcccgaggcggaggaagcaggtcaag
cgcctcaagaggggcggcggcggcggggcagagggcggccccgaagggagcagcgccttc
ctggcctcccagggcccccctcatcctctggggctccaaggaggagagccggggcccctc
tgcgagggcttggggctggccttttcggagccctacgccgggggcttcccgtaccgagac
tgcggccctctctcgctgcctgccttcgggggctacaacctccccaccccggagcccgac
tcgcaaagcggggcttgcggggagccggccttcttccccgctccgtccgaggaagcctcg
ggggctctgctggggccgccctacggctacccgacgccccccggggccgaatacccctgc
ggcggagccccccagcagtaccccttcttccgaggccgcttcccggtccctctggagccc
cctccgccttcctgccgtcgaggcggggagcctcctctcgagcccctgccggcccccgac
gtcgagctcctggccgaaatggaccgggccgagttcgagcagtacctgccctccttcgcc
ggacggacccccgagatggctctccccttcccgggacacgagggccccgacgccgcctat
tactgccccagcgccagcgccggaggaggaggaggaggaggaggaggcagcgcttacccg
gagctctga

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