Sceloporus undulatus (fence lizard): 121929041
Help
Entry
121929041 CDS
T07740
Symbol
AQR
Name
(RefSeq) RNA helicase aquarius isoform X1
KO
K12874
intron-binding protein aquarius
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121929041 (AQR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sund03041
]
121929041 (AQR)
Spliceosome [BR:
sund03041
]
Complex B
Other components
Prp19-related factors
121929041 (AQR)
Complex C
121929041 (AQR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD_C_2
SLFN-g3_helicase
DEAD
UvrD-helicase
AAA_16
AAA
Parvo_NS1
AAA_22
PhoH
DnaB_C
NB-ARC
nSTAND3
Motif
Other DBs
NCBI-GeneID:
121929041
NCBI-ProteinID:
XP_042320299
LinkDB
All DBs
Position
1:327401383..327473172
Genome browser
AA seq
1419 aa
AA seq
DB search
MKMYMERIVKSKFAIRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENV
PAWETFKKKPEHFPFFFKRVLDASLVENDSEFSLQEQTILLLFLDHCFNSLEVDLIREQV
QQLISLPMWMGLKPARLELELKKTPKLRKFWNLIRKNDGKMDENAQTQAYQERRFLSQLI
QKFISVLKSIPLTGPLSMDKVHYCERFIELMIDLEALLPTRRWFNTVLDDSHLVVHCYLS
SLAKREKEGHLFCQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFP
ELYNFALSNVSAVDTRDSLIKLFGPLSPSTLHQVASYLCLLPALPEGEDTNYEKEFLLEL
LVSRHERRISQIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYL
LRNFNLFRLESTYEIRQDIEDSVSRMKPWQSEYGGVIFGGWARMAQPIVSFTVIEVAKPN
IGENWPMRVRADVTVNLNVRDNIKEEWEGLRKHDVCFLITVRPTQPYGTKFDRRQPFVEQ
TGLVYVRGCEIQGMLDDKGRVIEEGPEPKPRLKGDSRTFRVFLDPNQYQQDMTNTIQNAA
EDVYETFNIIMRRKPKENNFKAVLETIRHLMNTDCVVPDWLHDIILGYGDPSSAHYSKMP
NQIASLDFNDTFLSIDHLRASFPGYSIQVAVEDPSLQVPPFRITFPVDNEVGKKRKEYDE
ERAEDPRVLIVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTG
KTDVAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELET
EKDFSRYGRVNYVLARRLELLREVGRLQESLGVPGDVSYTCETAGHFFLYQVMSRWEEYM
SKVKVKGSKLPDVADICSFFPFHQYFANAPQPIFKGRSYTEDMEIAEGCFRHIKKIFTQL
EEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEEAAQIL
EIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGV
PTVDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFRTANAGFLYDFQLINVEDFHGV
GESEPNPYFYQNLGEAEYVVALFMYMCLLGYPAEKISILTTYNGQKHLIRDIINQRCGNN
PLIGRPNKVTTVDRFQGQQNDYIILSLVRTKAVGHLRDVRRLVVAMSRARLGLYIFARVS
LFQNCFELTPAFSQLTARPLQLYIIPTEYFPATRQNGEHPSHQVHVIKNMPQMANFVYNM
YMHMIQSTRQHRQQDLLPPPALIEENETRRSQVSEIVPSREAEMETEDEIKSTPVEMVED
KVLEEKQNTEEEEEHRKMPEHPGRDSDSEDSETEEPAEK
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgtatatggaaagaattgttaaatcaaaatttgctattcggaaaataatgctt
ctagaatttagccagtacctagaaaattacttgtggatgaattattctcctgaggtgtcc
agcaaagcttatttgatgtcaatctgttgtatggtgaatgaaaagttcagggagaatgtg
ccagcatgggagaccttcaaaaagaagccagagcacttcccattctttttcaagcgtgtg
ctggatgcttccttggttgagaatgacagtgaattttctctccaagaacagacaatactc
ttactcttccttgatcactgcttcaacagtttggaagttgatttgattagagaacaagtc
cagcagctcatctccctgccaatgtggatgggtttgaagcctgctcgtctggaacttgaa
ttgaagaagactccaaagcttagaaaattttggaatttgatcagaaagaatgatgggaaa
atggatgaaaatgcacaaacacaagcataccaagaaagaagatttctttcacaattaatt
cagaaatttatctccgtattaaaatcaataccacttacaggtcctctctctatggataaa
gtgcactattgtgaaagattcattgaactcatgatagatctagaggccctgcttccaaca
cgacgctggtttaatactgtcctagatgattcccacctagttgtgcattgttatttgtcc
agcttagctaaaagagagaaggaaggccatcttttctgccagcttttagacatgctcaag
ttctatactggcttcgaaattaatgatcagactggaaatgcactgacagagaatgaaatg
accacaattcactatgatagaattacttccctccagagggcagcttttgcacatttccca
gaactttacaattttgccctttcaaatgtatctgctgtggacacacgtgactccctaata
aagctttttggacccctaagtccaagtacactccaccaggtggcatcatatctctgctta
ctgccagccctacctgaaggggaagatacaaactatgaaaaagagtttctgcttgaactt
ctggtatcccggcatgaacgtcgaatttctcaaattcagcagctgaatcaaatgcctctg
tatcccactgaaaagattatttgggatgaaaatattgtcccaactgaatattattctgga
gaaggctgtcttgccctcccaaaattgaatttacagtttctgactctgcatgactacctc
cttcgaaatttcaacctctttcgcctagagtctacctatgagatcaggcaggacatagag
gatagtgtcagtaggatgaaaccatggcaatctgaatatggtggtgttatctttggagga
tgggctcgaatggcacagcccattgtctctttcacagtcatagaggtagcaaaacccaac
ataggagaaaactggcccatgagagtccgagcagacgtaacagtcaacttgaatgttaga
gacaacatcaaggaggagtgggaaggtctgcgtaaacatgatgtttgctttttaattact
gttcggcctacacaaccctatggtacaaaatttgatagaaggcaaccatttgttgagcag
actggccttgtatatgttagaggatgtgaaatccaaggcatgttggatgacaaaggacgt
gtcattgaagagggaccagaacccaaaccaaggcttaaaggtgactcaagaacatttaga
gttttcttggatcctaaccaatatcaacaggacatgaccaataccattcaaaatgcagca
gaagatgtgtatgaaacatttaatataataatgagaagaaagccaaaagaaaacaacttt
aaagctgttctggaaacaataaggcatttgatgaataccgactgtgtggttcctgattgg
ttacatgatattatccttggctatggagatccaagtagtgctcattattcaaaaatgcca
aatcagattgcctccctggattttaatgatactttcctttccatcgatcacttaagagcc
agctttcctggatacagcattcaagtagcagttgaagatccttcacttcaagttcctcca
tttagaataacatttccagttgataatgaagtgggaaagaaacgcaaagagtatgatgaa
gaaagagcagaagaccccagagtgttgattgttgagccacatgttatccccaacagagga
ccttacccatacaatcaaccaaaacgcaatacaattcagttcactcatacccaaattgaa
gctatacgagcagggatgcaacctgggttgactatggttgtgggaccacctgggacaggg
aaaactgatgtagcagtccagataatatctaatctctatcacaactttcctgaacaaagg
acccttattgttacacattcaaatcaggccttgaaccagctgtttgagaaaatcatggct
ctagacattgatgagcgtcacctcctgcgtcttggtcatggagaggaagaactggagaca
gagaaggatttcagcaggtatggaagagtaaactatgttctggctcggaggttagagctt
ctgcgggaagttgggcgattgcaagaaagtctgggggtcccaggagatgtttcctatact
tgtgaaacagctggccatttctttttatatcaggtaatgtctcgttgggaagagtatatg
agcaaagtgaaagttaaaggcagcaaactgcctgatgttgctgatatctgcagcttcttt
ccttttcaccagtattttgcaaatgcccctcagccaattttcaaaggacgatcttacact
gaagacatggaaattgctgaaggatgttttagacatatcaagaagatatttactcaactt
gaggaattcagagcatttgaactgcttcgcagtggacttgacagatccaaatacctactt
gtgaaagaagcaaagatcattgcaatgacttgtacgcatgctgctttgaaacgccatgac
ttagttgagttgggcttcaagtatgataatatcttaatggaagaggctgctcagatactg
gagatcgaaacatttataccacttctcttgcagaatccacaggatgggttcagccgattg
aaacggtggatcatgattggggaccaccatcagttgcctccagttattaaaaacatggct
tttcagaaatattccaacatggagcagtctctttttacgcgatttgttcgcgtaggagtg
ccaaccgttgacctagatgctcagggtagagctagagcaagcttgtgtaatctctacaat
tggcgttacaagaacctggggaatttgccacatgtacaactcttgcctgaattcagaaca
gcaaatgctggtttcttgtatgacttccagcttataaatgtagaagattttcatggtgta
ggagaatctgaaccaaatccttatttctaccagaatcttggtgaggcagaatatgttgtt
gcgctcttcatgtacatgtgcctgctgggttaccctgcagagaagataagcatcttgaca
acatataatggacagaaacacctgattcgggatattattaaccagcgttgtgggaataac
ccactgattggaagaccaaacaaggtgacaactgtagatagatttcaaggtcagcagaat
gattatataatcctttcacttgtgcggaccaaagcagttggacacttgagggatgtccgg
cgtttggtggttgcaatgtcaagagccagacttgggctttatatatttgcaagagtatca
ctgttccagaactgctttgagctaactccagcattcagccagctgaccgctcgtcctctc
caactgtatattatccccacagagtattttccagcaacacggcagaatggagaacatcca
tctcatcaagtccatgttataaagaatatgcctcagatggccaattttgtgtacaacatg
tatatgcatatgatacaaagtacacgtcaacacagacagcaggatttattgccccctccg
gcattgattgaagaaaatgaaacacgtcgctctcaagtaagtgaaatagttccaagcagg
gaagctgagatggaaacagaagatgaaatcaaaagcaccccagtagaaatggtggaagat
aaagttttggaagagaaacaaaacacagaagaggaagaggagcatcggaaaatgcccgag
catccaggaagagatagcgatagtgaagatagtgaaacagaggaacctgctgaaaaatga
DBGET
integrated database retrieval system
