Sceloporus undulatus (fence lizard): 121929053
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Entry
121929053 CDS
T07740
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sund04515
]
121929053
Cell adhesion molecules [BR:
sund04515
]
Cadherins
Protocadherins
121929053
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
121929053
NCBI-ProteinID:
XP_042320307
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Position
4:complement(135260237..135262669)
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AA seq
810 aa
AA seq
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MEDCFRSKQGLCFLLFLCVTDVLCVSIHYSVPEEKKSGSLVANVLKDLKLGIGELSARRA
QLVSKSSKQYFHLDPHSGDVLINEKIDREALCGQSELCLLQSEIVLQNPLELYTIEVKVE
DVNDNAPRFSQNGFQLEIPENVSPNTRFPLESAEDVDLGENSIQNYTLSPNEYFRLETES
SDGRKSIDLILEKSLDREKQPHLELALMALDGGVPQRNGTIKININILDINDNPPQFAQS
EYKVRLKENSPRDTLVTKVEARDLDFGSNAQITYAFHRVPKKLPNLFHLNKMTGEITVMG
EIDFEKQTSYDMSIKATDGGGLSGHCNVLVEVEDVNDNAPEVSVISLTDIIQEDSPLNTV
VALFSVTDRDSGDNGKTMCSVDMNLPFALRSTKNNYYQLMIQSPLDRERVPEYNVTITAT
DQGSPRLTSTRMIHVQISDVNDNTPVFEKTLFEMRLQENNIPGLLIGSVHAVDLDMEQNG
KVSYSLLPGELGGSPAASYISINSETGNMYALRSLDYEQIKDFKVTVRAKDGGTPPQSSD
VVVRVVITDENDNAPFFLYPLQNSTSPCNELLPKMAEAGYLVTKVVAVDRDSGQNSWLSY
ELLKATDPGLFSIGAQNGEVKTRRPLTERDTSKQRLIIAVKDNGAPPQTSTATLNILPVD
GFSDPYLKVVDVRPQEHEDEGTLTMYLVICLASVSSVFLLCIISFAVIKSCKKDPGGMFI
AAPPHFPPSRPDIPENCTDSQSGSLSRNYQYDVCLTGGSLSSEFRFLRPLIPVFSVADPN
IPVIQKTSSGSHDLPHCLEDNMSKEQVRDH
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggaagactgcttcaggagcaaacaaggtctgtgttttttactcttcctttgtgtgact
gatgtactgtgtgtctcaattcattattctgtgcctgaagaaaagaaaagtggatctctg
gtggctaatgttttgaaagatttgaaattggggattggggagctctctgctcgcagagcc
cagctagtatccaaaagctccaagcagtatttccatcttgatccccactcaggggatgtg
ctcataaatgagaaaatagaccgagaggctctgtgtggccaaagtgagctttgcttatta
cagagtgaaattgtactccaaaaccccttagagctgtatactattgaagtgaaggtggaa
gatgtaaatgacaatgctcccagattttctcagaatggttttcagctggaaattcctgag
aatgtttccccaaatacaagattccccttagaatctgccgaagatgtggacttgggagaa
aacagtatccaaaactacaccctgagtcccaatgagtatttcaggcttgaaacagaaagc
agtgatggaagaaaatccattgatcttattttggagaaatctctagacagggaaaaacaa
ccacatttggagctggcacttatggctttggatggaggtgttcctcagagaaatggtact
attaaaataaatattaatatcttagatatcaatgacaatcccccgcagtttgctcagtca
gaatacaaagtaaggttaaaggaaaatagtcctcgggatactcttgtcaccaaagtggaa
gccagagatttggattttggttcaaatgctcagatcacatacgccttccatcgagtgccg
aaaaaattacctaatttgtttcatttgaacaaaatgactggagaaatcactgttatggga
gaaattgattttgaaaaacaaaccagttatgacatgagcatcaaagcaactgatggaggg
ggcctttctggacactgcaatgttctggtagaggttgaggatgtgaatgacaatgcccca
gaagtttcagtcatatcccttactgatataatccaagaggattctcccctgaacacagtg
gttgctctctttagtgttacagatcgtgactctggggataatggcaaaactatgtgctct
gtagatatgaaccttccctttgcattaagaagcaccaagaataactactaccagcttatg
atccagagccctctggacagagagagagtccctgaatataatgtcaccatcacagccaca
gatcaagggtctcctaggctcacctcaacaagaatgatccatgttcagatatcagatgtc
aatgacaacaccccagtgtttgaaaagactttatttgaaatgcggttacaagaaaataat
attccaggactactaattggctcagtccatgctgttgaccttgacatggaacagaatggc
aaagtgagttattcgcttttacctggagagcttggtggtagccctgcagcctcttacatc
tccatcaactctgaaactggaaacatgtatgccctccgatctctggactatgagcaaata
aaagattttaaagtcacagtgagggctaaagatggtggtactcctcctcagagctctgac
gttgttgtgcgagttgtgatcacagatgaaaatgacaatgctcccttcttcctctatccc
cttcagaatagcacatcgccctgcaatgagctccttcccaagatggctgaggctggatat
ctggtcaccaaagtggtggctgtggatcgagattctggtcagaactcttggctttcctat
gaacttctgaaggccacagacccaggccttttcagcataggagcccagaatggagaggtg
aaaaccaggagaccactgactgagcgagacacaagcaaacaaaggcttattattgcagta
aaagacaatggtgcccctcctcagaccagcactgcaacactcaatatacttccagtggat
ggcttttctgacccttatctgaaggtggtggatgtgcgtccacaggagcatgaagatgag
ggcaccttgaccatgtatttggtgatttgtctggcatccgtctcttctgtgtttctgctt
tgcattatttcttttgctgttatcaaatcctgcaagaaagaccctggaggcatgtttatt
gctgcccctcctcactttcccccttccaggcctgatatcccagagaactgtaccgattct
cagagtggatcactttccaggaattatcagtatgatgtttgcttaactggtggatcctta
agcagtgagttcagatttcttcggcctctcattcctgttttttctgtggcggatccaaat
atccctgttattcagaagacttcatctggttcccacgaccttcctcattgcttggaagat
aatatgtcaaaggaacaggtgagagaccattaa
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