Sceloporus undulatus (fence lizard): 121929056
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Entry
121929056 CDS
T07740
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sund04515
]
121929056
Cell adhesion molecules [BR:
sund04515
]
Cadherins
Protocadherins
121929056
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
121929056
NCBI-ProteinID:
XP_042320309
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Position
4:135345662..135369867
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AA seq
808 aa
AA seq
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MEDCFRSKQGLCFLLFLCVTDVLCVSIHYSMPEEKKSGSLVANVLKDLKLGIGELSARRA
QLVSKGSKQYFRLDAHSGVLLINEKIDREALCGQSDFCLLQSEIVLQNPLELYTVEVKVE
DVNDNAPRFSQNDSQLEIPEFVPPNTRFPLESAQDVDLGENSIQNYTLSPNEYFRLGIEN
KKDGRKSIGLILEKSLDREKQPHLELTLMALDGGVPQRTGTVKIKINILDHNDNFPQFIQ
SEYKVRLKENSPQNTLVSKVEARDLDFGSNAQITYSFHQVPGKILDLFHLNEMTGEITVA
GEIDYEKETSYDMSIKATDGGGLSGHCNVLVEVEDMNDNAPEISVISLTDRIQEDAPLNT
VVAIFSITDRDSGDNGKTMCSVQMNLPFALRIKNNYYQLMIHSSLDREKVPEYNVTITAS
DQGSPRLTSTRIIHVQISDVNDNTPVFEKTLFEMRLQENNIPGLLIGSVHAIDLDMKQNG
KVTYSLLPGELGGSPAASYISINSETGNMYALRSLDYEQIKDFKVTVRAKDGGTPPLSSD
VVVRVLIADENDNAPFFLYPLQNSTFPCNELLPKMAEAGYLVTKVVAVDRDSGQNSWLSY
ELLKATDPGLFSIGAQNGEVKTRRPLTERDTSKQRLIIAVRDNGVPPQTSTATLNVLPVD
GFSDPYLKVVDVRQQDHEDEGTLTMYLVICLASVSSVFLLCIISFVVIKSCKKDLGGTFI
GPAPHFPPSRPDIPENCTDSQSGSLSRNYQYDVCLTGGSLSSDFRFLRPLIPVFSVADPN
IPIIHKTSPGSQDLSDSVEDNQSKEQVR
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggaagactgcttcaggagcaaacaaggtctgtgttttttactcttcctctgtgtgact
gatgtgctgtgtgtctcaattcattattctatgcctgaagagaagaaaagtgggtctctg
gtagctaatgttttgaaggatttgaaactgggaattggggagctctctgctcgcagagcc
cagctagtgtccaaaggctccaaacaatatttccgtcttgatgcccactctggggttcta
ctcataaatgagaaaatagaccgagaggctttgtgtggccaaagtgatttttgcttatta
cagagcgaaattgtgctccaaaaccccttagagctctatactgttgaagtgaaggtggaa
gatgtaaatgacaatgctcccagattttctcaaaatgattctcagctggaaattcctgag
tttgttcccccaaatacaagatttcccttagaatctgcccaagatgtggacttgggagaa
aacagcatccagaactacaccctgagtcccaatgagtatttcagacttggaatagaaaac
aagaaagatggaagaaaatccattggtcttattctggaaaaatctctagatagagaaaaa
caaccacatttggagctgacacttatggctttggatggaggtgtccctcagagaactggt
actgtcaaaatcaaaatcaatattctggaccataatgataacttccctcaatttattcag
tctgaatacaaagtaagattaaaggaaaacagtccacagaatactcttgtctccaaagtt
gaagccagagatttggattttggttcaaatgctcagatcacctactccttccatcaagtg
cctggcaaaatacttgatttgtttcatttgaatgaaatgactggagaaatcactgttgcg
ggagaaattgattatgagaaagaaaccagttatgacatgagcatcaaagcaactgatgga
gggggcctttccggacactgcaatgttctggtagaggttgaggacatgaatgacaatgct
ccagaaatttcagtcatatcccttactgatagaatccaagaggatgctcccctgaataca
gtggttgcaattttcagtattacagatcgtgactctggggacaatggcaaaactatgtgc
tctgttcagatgaacctgccctttgcattaagaatcaagaataactactaccagcttatg
atccatagctctctggacagagagaaagtccctgaatataatgtcaccatcacagcctca
gaccaggggtctcctaggctcacatcaacaagaattatccatgttcagatatcagatgtc
aatgacaacactccggtatttgaaaagactttatttgaaatgagattacaagaaaataat
attcctggactactaattggctcagttcatgctattgacctagacatgaagcagaatggc
aaagtgacttactcgcttttgcctggagaacttggtggtagccctgcagcctcttacatc
tccatcaactctgaaactggaaacatgtatgccctccgatctttggactatgagcaaata
aaagatttcaaagtcacagtgagggctaaagatggtggtactcctcctctgagctctgat
gttgttgtgcgagttctgattgcagatgaaaatgacaatgctcccttcttcctctatccc
cttcagaacagcacttttccctgcaatgagctgctccccaagatggcagaggctggatat
ctggtcaccaaagtggtggctgtggatcgagattctggtcagaactcttggctttcctat
gaacttctgaaggccacagacccaggccttttcagcataggagcccagaatggagaggtg
aaaaccaggagaccactgactgagcgagacacaagcaaacagaggcttattattgctgtc
agagacaacggtgtcccacctcagaccagcactgcaactctcaatgtacttccagtggat
ggcttttctgatccttatctgaaggtggtggatgtgcgtcaacaggaccatgaagatgag
ggcaccttgaccatgtatttggtaatttgcctggcatccgtgtcttctgtgtttctgctt
tgcatcatttcctttgttgttatcaaatcttgcaagaaagaccttgggggtacttttatt
ggtcctgctcctcactttcccccttccaggcctgacatcccagagaactgtaccgattct
cagagtgggtcactttccaggaattatcagtatgatgtttgcttaactggtggctcttta
agcagtgacttcagattccttcggcctctcattcctgttttttctgtggcggatccaaat
atccctataatccacaagacctctcctggttctcaagacctatcagattccgtggaagat
aatcaatcaaaggagcaggtgagataa
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