Sceloporus undulatus (fence lizard): 121929136
Help
Entry
121929136 CDS
T07740
Symbol
TRPA1
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sund04040
]
121929136 (TRPA1)
Ion channels [BR:
sund04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121929136 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
121929136
NCBI-ProteinID:
XP_042320382
LinkDB
All DBs
Position
4:complement(207525210..207589776)
Genome browser
AA seq
862 aa
AA seq
DB search
MKRAVLKWFQSGEKKQQASYEGVVCDADAASIASQDVFKVISDGSTCRLRSFIKKNREGL
KKLDDLNATPLHHAAGRGQLELMQMIIDSSNEALNVTDSSGNTPLHWATKKNQTESVKLL
LGRGANPNILNSNMMAPLHLAVQSLYNELVKIFLEHSSTDVNLEGEGGNTPILVACYKDN
SEALRLLIENGGKICKANSIGCMPVHAAAFSGAKTCMEILIKRGEELGYSPENHINFTNN
GKCTPLHLAVQSGDLEMIKMCLEYGAQIDMKQNDKCTALHFAATQGATAILKLMMSSYSG
DEPIIDALDGNKETLLHRAALFDHYELAEYLISMGAKIDSVDIEGRTPLLLATSCASWKI
VNLLLSKGANVELKDHLGRNFLHLTVLHPGGLKHLNEQFLKMKHIKELVTDEDNDGCTPL
HYACRQGVPLSVNSLLELDVSIYSKSRDKKSPLHFAASYGRINTCLRLLRDMEDTRLLNE
GDKKGMTPLHLAAQNGHEKVVQFLLKKGALFLCDYKGWTALHHAAFGGYTRTMQIILNTN
VKCTDKVDEEGNTALHLAAREGHAKAVRLLLDDNAKILLNKTEASFLHEAIHNGRKDVVN
AVILHKRWEESVTTFTHHSSTNKCAILEMVEYLPECLKEAYGTPYLSVMQTFAMMLGDIN
YHDAFLEPMLTNKLPYPLLSFVILIVFTLLIPILLMNLLIGLAVGDIAEVQKFAALKRIA
MQVNLHTNLEKKLPYWFLSRVDQESITVYPNRPRYCGFMSVFQYCFGCDDRATDLQNADT
SLELEVLKQKYRLKDIATLLEKQHNLLKLVVQKMEIISEAEDEDTNDLFQHKFRKQQLQH
KNRKMVPQMSFQKQLRKGRELM
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgcggtgctgaagtggttccagtccggggaaaagaagcagcaggcctcctac
gaaggggtcgtctgcgacgccgacgctgcctccatcgcctcccaggatgtctttaaggta
atctcagatggaagtacctgcaggctacgaagcttcattaagaagaatcgtgagggactt
aagaaactggatgatctaaatgcgactccactgcatcatgcggcaggacgtggtcaactt
gagctaatgcagatgattatagattcttcaaatgaagcattaaatgtgactgactcatct
ggaaatacaccactacactgggccacaaaaaagaaccagactgaaagtgttaaattactt
cttggtagaggggctaatccaaacattttgaattctaatatgatggctccacttcacttg
gctgtgcagtccctttacaatgagttagttaagattttccttgaacacagctctacagat
gtaaacctggaaggagagggtggaaacacacctatattagtagcatgttacaaagataat
tctgaagcactcagacttctgatagaaaatggtggtaaaatatgtaaagccaacagtata
ggctgtatgccagtccacgcagctgcattctctggtgcaaaaacatgcatggagattctt
ataaaaaggggtgaagagctgggctattcccctgaaaatcacatcaactttactaataat
ggaaagtgtactcctcttcatttagcagttcaaagcggagacttggagatgattaaaatg
tgccttgaatatggagcacagattgatatgaaacagaatgacaaatgcacagctcttcac
tttgctgctacccaaggagctactgcaatacttaaattgatgatgtcctcttattcaggc
gatgaacctatcattgatgctttagatggaaataaggaaacgttgcttcacagggctgca
ttgttcgatcactatgaactggcagaatatctgatatcaatgggagcaaagattgatagt
gttgatattgaaggtcgaactccactactacttgctacttcatgtgcatcatggaaaatc
gtgaatttgttgctctcaaaaggggcaaatgtagaattaaaagatcacctcggtcgtaac
tttttgcacctaacagtactccatcctggaggattaaaacatctgaatgaacaatttttg
aagatgaaacatattaaagaacttgtaactgatgaagacaatgatgggtgcactccccta
cattatgcatgccgacaaggtgtgcctctttcagtcaatagtctccttgaattggatgtt
tccatctattctaaaagcagagacaagaaatctcctttgcattttgctgctagctatgga
cgaatcaacacttgtcttcggctcctacgagatatggaagataccaggctcttgaatgaa
ggggacaagaaagggatgactcctctacacttagctgctcaaaatggtcatgagaaggtg
gtacaattcctcctgaagaaaggtgcccttttcctttgtgattataaaggctggacagct
ttgcatcatgctgcctttggaggttatactcggacaatgcagataattttgaatacaaat
gtgaaatgcacagataaagtggatgaggaagggaacacagctcttcatcttgctgccaga
gaaggccatgcaaaagcagtgagactccttcttgatgataatgcaaaaatcctcctgaat
aaaactgaagcatcttttcttcatgaagccatacacaatgggcgcaaagatgttgtgaat
gctgtcatcttacataaaagatgggaagagtctgtaacaacatttactcaccactcttct
acaaataaatgtgctatcctggagatggttgaatatcttcctgaatgtttaaaagaagca
tatggcactccatatctttctgtaatgcagacctttgccatgatgctaggagatatcaat
taccatgatgctttccttgaaccgatgctgaccaataaactgccttatccattactgagc
tttgtaattctcattgttttcactctgcttattccaattcttcttatgaacttactgatt
ggtttggctgttggggacattgcagaggtgcagaaatttgctgcgttgaaaagaatagca
atgcaggtcaatcttcacacgaacttggagaaaaaactaccatattggtttctcagcaga
gttgatcaagaatcaatcactgtctatcctaacaggccaagatactgtggattcatgagt
gtgtttcagtattgttttggatgtgatgacagagcaacagatttgcagaatgctgacaca
tcattagaactagaagtactgaagcagaagtacagacttaaggatattgcaacactcttg
gagaaacagcacaacctccttaaactggttgtacaaaaaatggagataatatctgaggct
gaggatgaagacacaaatgatttgtttcaacacaaatttaggaaacagcagttgcagcac
aagaacaggaagatggttcctcagatgtccttccagaagcagttaagaaaggggagggag
ctgatgtga
DBGET
integrated database retrieval system
