Sceloporus undulatus (fence lizard): 121929145
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Entry
121929145 CDS
T07740
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121929145 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sund03400
]
121929145 (RAD54B)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
121929145 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_22
TusA
SWI2_SNF2
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
121929145
NCBI-ProteinID:
XP_042320390
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All DBs
Position
4:complement(218521986..218569767)
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AA seq
962 aa
AA seq
DB search
MRRSAAPSQVLGNSAKKPRFTSPARNNIVSLKNESENLDPEAQTAEVDQEKQSGSTPINI
CSAVALMSQAKLSSKIDKEENRHLETGMKPAYTTKIVLPWKRKQLLLQAHHSQSWNTILL
LSHWSWIKRKKIVVYSIANQPNSYYDIQFYLCPLQIQKDPIEKTDQETPETTEISELSCC
TKFFSVVWCKASKKKHKKWEGDAVLIVKGRSVTLKDLEGKDIGRGSGYKAKNLENLDEGQ
TLIIGSKEIEVMGIIPEEDFRSGRCFQSGVGGTEDVWKSSQASVKPFNNPFKNVSQGNSK
GNSLQSSQNYKPRHDPCAPNCLVMPHPSPQHQRMFNKSGLPLVDVVVDPYLVNHLRPHQR
EGVTFLYECVMGMRVNSRFGAILADEMGLGKTLQCISLVWTLLRQGPYGCKPVIKHTLIV
TPGSVVKNWGKEFQKWLGNERIKVFLVDQDHKVEEFVNSPLYSVLIISYEMLLRSLDQIQ
KTEFSLIICDEGHRLKNSSIKTTNALVSLSCERRIILTGTPVQNDLQEFYALIEYVNPGV
LGSLSAYKKVFEEPIIRSREHSATKEEIELGERRAAELTRLTGLFILRRTQDVINKFLPP
KKESILFCRPTVLQLDLYRRLLCSQVVRSCLQGSLENSPHLICIGALKKLCNHPCLLFKA
IKEKECDSSCAKQEKQNLYEGLLDISREYAPSSFSETDSGKLIVLVQLLAAIHDLSPSER
VVVVSNYTQTLNILQEVCKRYGYSYTRLDGSTPVSQRQQIVDGFNNKICSAFIFLLSSKA
GGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKHTVHIYRLLTTGTIEEKIYQRQ
ISKQGLSGAVVDFSKGSEHIRFSVEELRNLFILHEDSNCITHDLLECKCMGKKDDQGPSE
KHSIQQDCQLLQSNMKSLSKKILSMSQLMQWKHFSADHGNLPDPFLERIKENVTFVFQSM
TN
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggtcggcagctccaagtcaagtgcttgggaattcagccaaaaagccgaggttt
acgtcaccagcaagaaacaatattgtctcattgaagaatgaatctgaaaacttggaccca
gaagctcaaacagcagaggtggaccaagaaaaacagagtggatcaacacccatcaacatt
tgctctgcagtggctttgatgtctcaagcaaaactttcctctaaaattgataaagaggag
aaccggcatttggaaactggtatgaaaccagcatatacaactaaaatagtgctaccttgg
aaaaggaaacagttgctactacaagctcaccacagccaatcttggaacaccatcctgctg
ctatcacactggagctggatcaagaggaagaagattgtggtgtattcaattgcaaatcaa
ccaaacagctattatgacatccagttctatctctgcccacttcagatacagaaggatccc
atcgagaaaacagatcaggaaactccagagacaacagaaatatcagagctaagttgctgt
acaaaatttttcagtgttgtatggtgcaaggcctcaaagaagaaacataagaagtgggaa
ggtgatgctgttcttattgtgaagggcaggtccgtgaccttgaaggatctggaaggcaag
gacattggaagaggcagtggatacaaagccaaaaacttggaaaatcttgatgaaggtcaa
actctgataattggaagcaaagaaatcgaagtgatgggaatcattcccgaagaggacttt
agaagtggcaggtgttttcagtctggtgtagggggtacagaggatgtttggaagtcatca
caagcttctgtgaagccattcaataacccattcaaaaatgtcagccaaggcaacagtaaa
ggaaattcactccagagctcccagaactataaaccgcgtcatgatccatgtgcgccaaat
tgccttgttatgccacacccatctcctcaacaccaacggatgttcaataagtcaggcttg
cctcttgtggatgttgtcgtggacccttaccttgtgaaccatcttcgtccacatcagcga
gaaggagttacatttctttatgaatgtgtgatgggaatgagagtaaacagtagatttgga
gctattcttgcagatgaaatgggtttaggaaaaaccctgcagtgcatttcacttgtctgg
actctcctgcgtcaagggccatatggatgcaaacctgtaataaaacatacactaatagtt
actcctggaagtgtggtgaagaactgggggaaggaatttcagaaatggttgggaaatgaa
agaattaaggtgttcctagttgatcaggatcacaaagtggaagagtttgtcaactccccc
ctttattcagtcctgatcattagttatgagatgcttttacgctctttggaccaaatacag
aagacagagttcagtctgataatatgtgatgagggacatcgtttgaaaaacagttctatt
aaaacaaccaatgcccttgtcagcctatcttgtgagaggagaatcattctgactggcaca
ccagtacaaaatgatctacaagaattttatgcattaatagaatatgtaaatcctggagta
cttggttcattatccgcatataaaaaagtgtttgaggaacctattatcagatcccgagag
cattcagctaccaaggaagaaattgaactgggagagagacgggcagcagaacttacacgc
ctgacaggactcttcattcttagaaggacccaagatgtcataaacaaattcctccctcct
aaaaaggagagcatacttttctgccgtccaacagtgttgcagctggatctctaccgaaga
ttgctgtgttctcaggttgttagatcttgcttacaaggcagtctggaaaacagccctcac
ttaatttgcattggagctttaaaaaaactttgcaatcacccctgccttttattcaaagca
ataaaggagaaagaatgtgattcttcttgtgctaagcaagagaaacagaatctctatgaa
ggtttgcttgacatttctcgagaatatgccccatcctctttttctgagactgactccggg
aaattgattgttctggtacagctgctggcagcaattcatgacctcagcccttcagaaaga
gttgtggtggtgtcaaattacacacagacactgaatatattacaagaggtgtgcaaacgt
tatggatactcctacacaagacttgacggcagcactcctgtttcccagagacagcagatt
gttgatggttttaataataaaatctgctcagcttttatcttcctgctaagttcaaaggcc
ggtggtgtaggtctgaaccttgttggagcgtcccatttaatcctatacgacattgattgg
aatccagccactgatattcaggcaatggccagagtgtggagagatggacagaagcataca
gtgcatatttatagactgctaactacaggcacaatcgaagaaaaaatctatcagaggcag
atcagtaagcagggtctctctggggcagtggtagacttttcaaagggatctgaacacatc
cgtttttcagttgaagaacttagaaatctctttatactgcatgaagattctaactgcatt
actcatgatcttctggaatgtaaatgtatgggaaagaaagatgatcaaggtccttcagaa
aaacattccatacaacaggactgccagcttctccaaagcaatatgaaatctctttccaaa
aaaatcctatctatgtcacagctgatgcagtggaaacacttctctgcagaccatggaaat
ctccctgatccctttctggaaagaataaaagaaaatgttacatttgttttccaaagtatg
accaactga
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