Sceloporus undulatus (fence lizard): 121929397
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Entry
121929397 CDS
T07740
Symbol
POP1
Name
(RefSeq) LOW QUALITY PROTEIN: ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121929397 (POP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sund03009
]
121929397 (POP1)
03016 Transfer RNA biogenesis [BR:
sund03016
]
121929397 (POP1)
03029 Mitochondrial biogenesis [BR:
sund03029
]
121929397 (POP1)
Enzymes [BR:
sund01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
121929397 (POP1)
Ribosome biogenesis [BR:
sund03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
121929397 (POP1)
Transfer RNA biogenesis [BR:
sund03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
121929397 (POP1)
Mitochondrial biogenesis [BR:
sund03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
121929397 (POP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
121929397
NCBI-ProteinID:
XP_042320868
LinkDB
All DBs
Position
4:220734943..220763835
Genome browser
AA seq
1040 aa
AA seq
DB search
MRGGKRLSVGVRVWIFQRAVPSVIVVVRSSSLTVVRKGILGDVVRSIGGKKDKVSAEMSK
AKEKKRAKKMKNQPSSVTFPFDSEPSHNEIYFPNGGDKTSQRKKTDKRFETSQQSFMHQK
PFHEIPKYVTVSPFVQARAAEMKAMLKAVSQKSSNTLVFQSLPRHMRRRAMSHNIKRLPR
RLHELARIETEKSKHLKKDLPKSKCRKARRRHTNLVAEFNRRQKKNIWLETHIWHAKRFH
MVKKWGYCLGDRPTTKSYRACYRAMTNHCLLQDLSYYCCLELIGKEKQLLTALARMCNVD
AGPTFAAVPCLTGKREGAVMLYRRDRYPEDALGPVTFIWNPTNRSDESPQSRQLWMWTHP
AFKQDILAELKAVFQCSEPMDICNPEPVPTLAQEESKMYVAENVGQKRKRKNQGGEMVVV
PVKKIIGDGTRDPHQPYCWASQITGIVISDLTMEILRYRLIGPLSHCVLTEALKVASAHT
EKDSKDSKMNSWWIEKCQNPNQVSVHLRQESTFQLLQELSSSDIPSGTVLGLTVGDPRVN
LPKKRSKAMPNPEKYQENKEVKQLILEGVPAECAQSFLWDQNIRKSVTDTKMPEQELNRL
RSELLVPGSHLDLGPRESKIPILLVQHPGKKAGQDRPGWGSGWDIYLPKGWGMAFWLPFI
YRGARIGGLKEALKHSLYKRTPHVPHDYPDCPAGVQFANELERDLLEKFKRRPPAKRANY
VKHGTLAPFFCPWSKLTHDWEARCKNRKYTDAAAIDSQASASGEEVSLGPSSEAHEVESP
VTCALHQQIEMSSQNKQMEEEKKATDLCKEDETTSSQSFCVLRSKKLLRQVAVWCQPPSH
KNRRIQCLASKLDQKELSEDALLPMYRCYPRALVWVSLSLLRKGSPELHTMICIPTEEDI
LQLHRGQHFFGPQEPKHSDRFKSKVSKQKGKKERENSEKAKESSSSDTVNVSSSEHKDLV
LGLWPDPLPDVTSHCSRVLLGFVTQGDFSLASGCGEALGFVSLTGLLEMLIGQPASKRGL
VLLRNPASLQYRFARLIVEI
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgagggggggaaaaagactgtcggtgggtgttcgagtgtggattttccagcgtgccgtc
ccttctgtcattgtcgttgtaaggtcctcttcgcttaccgtagtgcgcaaagggattctg
ggagatgtagtccggagcattgggggaaagaaagataaggtttcagcggaaatgtcaaag
gcaaaagaaaagaaaagagccaagaaaatgaagaatcagccttcaagtgtgacttttccc
tttgacagtgagcctagtcacaatgaaatatactttcccaacggtggtgacaaaacctct
caacgcaagaagacagataagcgctttgaaacctcacaacagagcttcatgcatcagaaa
cctttccatgaaatacctaaatatgtaacagtgtctccttttgttcaagctcgtgctgct
gaaatgaaagctatgctgaaggcagtttcacagaagtcatccaacaccttagtgtttcag
tctctacctagacacatgaggaggcgagctatgagccacaatatcaagcgtctacccagg
cgactccatgaacttgccagaatagagacagagaaatctaaacatctaaagaaagacctc
ccaaagagcaaatgtcgtaaagccagaagacgccatacaaacttggtggcagaattcaat
cgcagacaaaagaaaaatatctggttggaaacgcacatctggcatgcaaaaaggtttcat
atggtgaagaaatggggatattgcttaggagacagacccacaacaaagagctaccgggcc
tgctaccgagccatgacgaatcattgcctcctccaggatttatcatattactgttgtctg
gagttgattggaaaagagaagcagcttctgacagcacttgctcgaatgtgtaatgtagat
gcaggtccaacatttgcagctgttccttgtcttactgggaagcgtgaaggtgctgtcatg
ctataccggagagatcgctaccctgaagatgcacttggtccagttactttcatttggaat
cccacaaataggtctgatgagtctcctcaaagcagacagttgtggatgtggacacaccca
gcctttaagcaggacatactggctgagttaaaagcagtcttccagtgttctgaacccatg
gatatttgtaatcctgaacctgttccaacattggctcaagaagaaagtaaaatgtatgtt
gctgaaaatgttggccagaaaaggaagaggaaaaaccaaggaggagaaatggtggttgtc
ccagtgaaaaaaataattggtgatggaaccagagatccacaccagccctattgctgggca
tcacagattactgggattgtgataagtgatttgacaatggagatcctcagataccgatta
attggtcccctctctcactgtgttcttacagaagcactcaaagttgcttctgcacacaca
gaaaaggattccaaagattctaaaatgaatagttggtggatagaaaaatgccaaaaccct
aatcaggtgtccgttcatctccgtcaggaatccacctttcaattgctgcaagagttaagt
tcatcagacattccatcaggtactgtactgggtttgactgttggggatcctcgagtgaat
ttgccaaaaaagagatcaaaggccatgccaaatccagaaaaatatcaagagaataaggaa
gtgaaacagctgatcttagaaggcgtgcctgcagaatgtgcacagagttttctctgggac
cagaatattcgtaagagtgtcacagacaccaaaatgccagaacaggaattgaatcgttta
agaagtgaactcttggtgcctggatcacatcttgacttgggccctcgagaatccaaaatt
cctatactcttggttcagcatcctggaaaaaaagctggacaagatcgaccaggttgggga
agtggctgggatatttatctccccaaaggctggggcatggctttctggcttccttttatc
tatcgaggtgcacgaataggtggcttgaaagaggctctgaaacattccctgtataagaga
acacctcatgtgccccacgattatccagactgtcctgctggtgttcagtttgccaatgaa
ctagagagagatcttcttgaaaagtttaagaggcggcctcctgcgaaaagggcaaattat
gttaaacatgggaccctggcaccctttttctgtccctggagtaagctcacccatgactgg
gaagctagatgtaaaaacagaaaatacacagatgctgcagctatagacagtcaagcttct
gcatctggagaagaggtttcccttggacccagctctgaagcacatgaggtggaatctcct
gtgacatgtgcattacatcaacaaatagagatgtcctcccaaaataagcagatggaagaa
gaaaaaaaggcgactgatttatgcaaggaagatgaaaccacatcaagccagagcttctgc
gttctcaggagcaagaagttattaaggcaagtggcagtctggtgtcaacctccatctcac
aaaaatcggaggatacaatgccttgcttccaagctagatcagaaagaactgtctgaagat
gctctcttgccaatgtatcggtgctatcccagggcattagtatgggtcagtttgtccctt
cttagaaaaggtagccctgaattgcacacaatgatttgcattcccacagaagaagacata
ttacagcttcacagaggccagcacttctttggtcctcaggaacctaaacacagtgataga
tttaaaagcaaggtgtcaaaacagaaaggaaaaaaagagagagagaattctgagaaggca
aaggaaagcagttcctctgatactgtgaatgtatcatcaagtgaacataaagatcttgtt
ctcggcttatggcctgaccctctgccagatgtgacatcacactgttccagagttcttttg
ggttttgttactcaaggggacttttcattggcctctggctgtggtgaagctcttgggttt
gttagtttgacaggactgctggaaatgttgataggccaaccagcaagcaagagagggctt
gttttgttacgcaatccagcttcactacagtatagatttgctaggcttattgttgaaatc
taa
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