Sceloporus undulatus (fence lizard): 121929508
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Entry
121929508 CDS
T07740
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121929508 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sund03021
]
121929508 (TAF4)
03036 Chromosome and associated proteins [BR:
sund03036
]
121929508 (TAF4)
Transcription machinery [BR:
sund03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121929508 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
121929508 (TAF4)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
121929508 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
121929508
NCBI-ProteinID:
XP_042321061
LinkDB
All DBs
Position
4:13831027..13944858
Genome browser
AA seq
1138 aa
AA seq
DB search
MAAGSDLLDEVFLNAEVDEKVVSDLVGSLESQLAASGHHQHQHHPHHPLRGQEPLRAAGP
TLGNHVVSSGGGGGGGSGSNTSSSSSPSPGGGGGIVVVGGNANNVQTEGGGSNATSTTTT
NTGGGGSTTTTASTAKMGLSGPETTKPGAGGVQGSVINHNARSQGSTLDGATTTSTTTNV
QGGSEASVTPGTLNQGKSVVISTMATALSTRNGKIGSTAVQTLNGSNVVMNSHTSFSATP
VTANPAIVPAVTPLVNNGPGNVGKVSTVNALLPSASNTVIQTSFLGTGVSSVSSPSPTVI
SSQQPPGIGTGGPTVTLVRPPIHAAGPSVAAATQNGSNTVINSTISVGSFPAAAVAAASV
GSGVSLQTSLVNSQPGSGVPTAPTTQVIKSESPKTIVQTVTQQQTLASGGQPSTTGGNMI
IGQTMQAGLPNVAPNPGGVPPAPGTPTGLAKGAANTVAQSLPRTPAATTSGIRATLTPTV
LAPRQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQHALAQMQAQAHAQSQSQTTMTPR
PATPTSASPVQLSTVQVSSLRNAPGTPIIARQMAPTTIIKQVSQAQTTVQSTTTLQRPPV
VQPQIVLGSPAQTTALGTATAVQTGTPQRTVQGATATSTVATETMENVKKCKNFLSTLIK
LASSGKQSTETAANVKELVQNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALR
QLTPDSAAFIQQSQHQQPTTQPTTALTAVMLSSSVQRTAGKTTATVTSTLQQPVISLTQP
TQVGVGKQGQPTQVVIQQSQKPGTLIRPPQVTLTQTPMVALRPPHNRIMLTAPQQIQLNP
LQTVPVVKQTVLPGTKALSTLSTQAAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSE
ESARILATNSELVGTLTRSCKDETFLLPTPLQRRILEIGKKHGITEIHPDVVSYVSHATQ
QRLQNLVEKVSETAQQKNISYKDDERYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILM
RAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGAGS
GTEGSSTSVAVPGSSGVGTTRQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacgctgaggtggacgagaag
gtggtgagcgacctggtcggctccctggagtctcagctggcggcctcggggcaccaccaa
caccagcaccacccgcaccacccgctccggggacaggagcccctccgggccgcgggcccg
acgctggggaaccatgttgtgagcagcggcggcggcggaggcggcggcagcggcagcaac
accagcagcagcagcagccccagccccggaggaggaggagggatagtagtagtgggaggc
aatgcgaataatgtccagacggagggaggaggcagcaacgcaacctccacaaccacaacc
aacaccggaggaggaggcagcacgactaccaccgcctccaccgccaagatgggactcagt
ggcccagagaccaccaagccaggagctggtggagtgcaagggagtgttatcaatcataat
gcaaggtcccagggttccactttggatggagccactacgaccagcaccactacaaatgtc
caaggtggatccgaagcttctgtcaccccagggaccctcaaccagggcaaatcagtagtc
atcagcaccatggcgacagctttatcaaccaggaatggtaaaattgggtccacggcggtg
cagactttgaatgggagcaatgtggtgatgaattctcatacttctttctcagctactcct
gtaacggcgaacccagccattgtcccagctgtcacccctcttgttaacaatggacctgga
aatgtggggaaagtcagtactgttaatgccttgttgccctctgcttcaaatactgtcatc
cagacttctttccttggcactggggtgtcttcagtgtcttcaccctcacctacagtgata
tcctcacaacaacccccgggcattggaactggagggccgacagtaacattggtgaggcca
cccattcatgcggcaggaccctcggtggctgcagccacccagaatgggagcaatactgtg
atcaattcgaccatcagtgtggggagttttcctgctgcagctgttgctgcagcctctgtg
ggttctggtgtttccctccagacctctcttgtgaacagccagcctggttctggtgtaccg
actgcacccaccacacaagttataaagtcggagtctcctaaaactattgtgcagacggta
acccaacagcagaccctggcttctggtggccagcccagtactacagggggtaatatgatt
attgggcaaactatgcaagctggcctgcccaatgtggcccctaatcctggtggagttcct
cctgctccaggtacccccacaggcctggctaagggtgctgccaatacagttgcacagagt
ctaccgaggactccagcagcgactacaagtggaatcagagcgactttgactcccactgtt
ttagctcctcgtcagcctcctcagaatccgacaaatattcagaactttcagttgccacca
ggcatggtccttgtacgaagtgaaaatggccagttactgatgatccctcaacatgctttg
gcacagatgcaggcccaagcacatgcacagtcccagtctcaaacaaccatgactcctcgc
cctgccacacctaccagtgcttctccagtccagctctcgactgtgcaggtcagttcactg
agaaatgctcctggaacgcctataattgcacgtcagatggccccaaccactataatcaag
caagtgtctcaggcacagacaactgtacagtccacaacaacgttacagaggccgcctgta
gttcagcctcagattgttctgggtagtcccgcacaaacaacagcattaggaacagcaact
gctgtgcagactggaactcctcagaggacggtgcaaggagccacagcgacctcaactgtg
gccacagaaaccatggaaaatgtgaagaaatgcaagaatttcctctctacgttaataaaa
ctggcctcttctggaaagcagtctacagaaactgcagctaatgtgaaagaactagttcag
aacctgctggatggaaaaattgaagcagaagatttcaccagcaggttataccgggaactt
aattcttcacctcaaccttaccttgtgcctttcttgaagcggagtttgcctgccttgaga
cagctgactccagattcagcagcttttattcagcaaagccagcatcagcagcccacaacg
cagcccacgactgctctaacagccgtgatgctgagcagctccgttcagcgtacagcaggg
aagaccactgccaccgtaacgagtaccttgcaacaaccggtcatcagtttaacacagcca
acgcaagttggggttggcaagcaagggcagcccacgcaagtggttatccagcagtctcag
aaaccaggcacgttgattaggcctccacaggtgacattgacacagacccccatggtggcg
ttgaggccaccacacaaccgtattatgcttactgctcctcagcaaatacagctgaaccca
cttcagacagtccctgtggtaaaacagacagtattacctggaaccaaagctctttctaca
ctttcaacccaagcagctgctgctcagaaaaataaactcaaagaacctgggggaggttct
tttagggatgatgacgatattaacgacgttgcctcgatggcaggagttaacttatcagaa
gagagtgcacgcatattggccacaaattctgaattggtgggcacgttaacaaggtcgtgt
aaggacgaaaccttccttctcccaacgcctttgcaaagaaggatattagaaataggtaaa
aagcacggaataacggaaattcatcctgatgtagttagttatgtatcacacgcaacgcaa
caaaggttacaaaacctggttgagaaggtatcagaaactgcccagcaaaagaatatttct
tataaggatgatgaaagatacgagcaagcaagtgatgttcgggcgcagctcaagttcttt
gaacaacttgatcaaatagaaaaacagcggaaagatgaacaagaaagagaaattttaatg
cgcgcagcaaagtctcgatctagacaagaagatccagagcagctaaggttgaaacagaag
gccaaggagatgcagcaacaggaattagcacaaatgagacagagggatgccaacttaact
gcactggctgcaataggacccagaaagaagaggaaagtggattctccaggcgctggatca
gggacagaggggtccagtacaagtgtagcagttccgggcagctctggagttggaacaacc
aggcagtttacaaggcaaaggataacgcgggtgaacctcagggacctcatattttgttta
gaaaatgagcgagagacaagccattcactactgctatacaaagcattccttaagtaa
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integrated database retrieval system
