Sceloporus undulatus (fence lizard): 121929640
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Entry
121929640 CDS
T07740
Symbol
CDH20
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-20
KO
K06807
cadherin 20, type 2
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sund04515
]
121929640 (CDH20)
Cell adhesion molecules [BR:
sund04515
]
Cadherins
Major cadherins
121929640 (CDH20)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
Cadherin_CELSR2_9th
TAS2R
Motif
Other DBs
NCBI-GeneID:
121929640
NCBI-ProteinID:
XP_042321336
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All DBs
Position
4:162870646..163109886
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AA seq
801 aa
AA seq
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MAMQTSCRMDSAKKWLGLSISLSFYLITNLITIVLSGSPRTPSKSQEDSPLDNLLLHPRM
KRSWVWNQFFVLEEYTGTDPLYVGKLHSDMDRGDGSIKYILSGEGAGVVFTIDDTTGDIH
AIQRLDREERSQYTLRAQALDRRTGRPMEPESEFIIKIQDINDNEPKFLDGPYVASVPEM
SPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSRTGLIRTALMNMDREAKEY
YEVIIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQMNVLESAPVSSTVGRVL
AKDLDEGINAEMKYSFVDGDGMDVFDITTDPTYQVGIITVRKPLSFESKKTYTLKVEGAN
PHLEMRFLSLGPFRDTATVHITVEDVEEPPVFEPSFYFVEVPEDVDIGTTIQMIYAKDPD
VTNNSIRYSIDRSSDPGRFFXVDIATGALMTARPRMGRYFMAHITVLAHKLNNPSQVGSV
SVTIKVLDVNDNAPEFPRFYEAFVCENAKAGQLIQTVSAVDQDDPQEGQHFYYSLAPEAA
NNPNFTLRDNQDNTAWILTRRSGFRQHEQNTFYLPILIADNGRPMLSSTGTVTIHVCSCD
DKGLVMSCNAEAYVLPVSLSRGALIAILACIFVLLVLVLLILSMRRHRKQPYIIDEEENI
HENIVRYDDEGGGEEDTEAFDIAALWNPREAQVVMKSRQDMMPEIESLSRYVPQACTMDS
SVHNYVLAKLYEADMDLWAPPFDSLQTYMFEGNGSVAESLSSLQSVSTDSEQSYDYLTDW
GPRFKKLAEMYGATEGSGALW
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcagacttcgtgcagaatggacagtgcaaagaagtggcttggactcagtata
tccttaagtttttatctaataacaaacctcattactattgtattatctgggagccccaga
acacccagcaaaagccaagaagacagtcccttggacaacttgcttctccatccacgaatg
aaaaggagctgggtatggaatcagttctttgttttggaagaatatactggaactgatcct
ttgtacgtgggaaagctccattctgatatggacagaggagatggatcaatcaaatacatt
ctttcaggagaaggagcaggtgtagtgtttaccatcgatgacactactggggacatccat
gccatacaaagactagaccgagaagaaaggtcccagtatacactaagggctcaggccttg
gacagacggacaggcaggccaatggaaccagaatctgaattcatcatcaaaatccaagat
atcaatgacaatgaacccaagtttctggatggaccatatgttgcttcagtaccagaaatg
tcaccagtgggcacctctgttattcaagtgacagcaacagatgctgatgatcccacctat
gggaacagtgccagggtagtctacagtattctccaaggacagccatatttctcggtggac
tccagaacaggcttaattagaacagcactaatgaacatggacagagaagcaaaagaatat
tatgaagtaataatccaggccaaagatatgggaggacagctgggaggattagctgggaca
actactgtcaatatcactctctctgatgtaaatgacaatccacccagatttccacagaaa
cattatcagatgaatgtactggagtctgctccagtcagctctactgtgggccgtgttctt
gctaaagacttggatgaaggcattaatgctgaaatgaaatacagctttgtggatggagat
ggaatggatgtctttgatatcaccactgatcctacttatcaagttggcatcattacagtg
agaaagccactgagctttgaaagcaagaaaacatacactttaaaagtagagggtgctaat
cctcacctggaaatgcgtttcttgagcctaggcccgtttcgtgacactgcaactgtgcat
atcactgtggaggatgtggaagagcccccagtgtttgagcctagcttttattttgtggag
gtacctgaagatgtggacattgggaccaccatacaaatgatatatgccaaggaccctgat
gtgaccaacaactctatcaggtattccattgatcgaagcagcgatcctgggcgcttcttt
taggttgacattgcaacaggggctctgatgacagcaagacctcggatgggaagatatttc
atggcacatatcactgtgttggcccacaaacttaacaatccttcacaggttggcagtgtt
tcagtcacaataaaagtcctggatgtgaatgacaatgctccagaatttcccaggttttat
gaggcctttgtgtgtgaaaatgcaaaagctggacagcttattcagacagtgagtgcagta
gaccaggatgacccacaggagggacaacacttctactatagcttggctcctgaggcagct
aacaaccccaattttactctaagggacaatcaagacaacacagcttggattttaaccagg
agatcaggcttccggcagcatgagcagaacaccttctaccttcctatcctgatagctgat
aatgggcgtcccatgcttagtagcaccgggacagtaaccattcatgtttgcagttgtgat
gacaaaggccttgtgatgtcttgcaatgctgaggcctatgtactacctgtgagcctgagc
agaggagcccttattgccatccttgcctgcatatttgtgttgctagtgctagtgctactg
atcttatccatgagaagacacaggaagcagccttacattatagatgaagaggagaacatc
catgaaaacattgtccgatacgatgatgagggaggtggtgaggaagatacagaggccttt
gacattgctgccctgtggaaccctagagaggcccaagtggtgatgaagagcagacaggac
atgatgccagaaatcgagagcctttccagatatgtgcctcaggcctgcacaatggacagc
agcgttcacaactatgtgttggccaagctctacgaagctgatatggacctctgggcacct
ccctttgactcactccagacatatatgtttgaggggaatggctcagtagccgagtcactc
agttccttacaatccgtgagcacggactcagagcagagctatgattatctgacggactgg
gggccacgctttaaaaaactggccgaaatgtatggtgctacagaagggagcggggcgctt
tggtaa
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