KEGG   Sceloporus undulatus (fence lizard): 121929822
Entry
121929822         CDS       T07740                                 
Symbol
BCAS2
Name
(RefSeq) pre-mRNA-splicing factor SPF27 isoform X1
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
sund  Sceloporus undulatus (fence lizard)
Pathway
sund03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sund00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121929822 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sund03041]
    121929822 (BCAS2)
   03400 DNA repair and recombination proteins [BR:sund03400]
    121929822 (BCAS2)
Spliceosome [BR:sund03041]
 Complex B
  Other components
   Prp19 complex
    121929822 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    121929822 (BCAS2)
DNA repair and recombination proteins [BR:sund03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    121929822 (BCAS2)
SSDB
Motif
Pfam: BCAS2 EzrA HAUS2 FmiP_Thoc5 THOC7 Tup_N CCDC113_CCDC96_CC TMCO5 GAS Filament DUF3450 SCRG1 Relaxase_C Uso1_p115_C OmpH
Other DBs
NCBI-GeneID: 121929822
NCBI-ProteinID: XP_042321677
LinkDB
Position
4:48234334..48242548
AA seq 225 aa
MSGPGLVAGEVAVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLPAPDYSA
FETEIMRNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQYGCNAWKVYNEHLVHMIEQAQKELQSLRKHIQDLNWQRKNMQLTAGAKLRE
MESTWVSLVSKNYEIERTIVQLENEISQIKQQHGEANKENIQQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atgtcggggccgggcctagtggcgggcgaggtggcggtggacgcgctgccctacttcgac
cagggctatgaggcgccgggagtccgggaggcggcggcggcgctggtggaggaggagacg
cggcggtaccggcccaccaagaactacctcagctacctgcctgcccccgactacagcgcc
ttcgagactgaaataatgaggaatgagtttgagcgtcttgcagcccgacagcccatagaa
ctgctgagtatgaagaggtacgagctgcctgcaccttcctctgggcagaagaatgacatc
acagcatggcaagaatgtgtcaataattctatggctcagctggagcaccaggcagtccga
attgagaatttggagttgatgtctcagtacggctgcaatgcgtggaaagtatataatgag
catttagttcatatgattgaacaggcacaaaaagagctacagagtttgagaaaacacatt
caggaccttaactggcagcggaagaacatgcagctcactgcaggtgctaaacttcgggag
atggaatccacttgggtgtctcttgtcagtaaaaattatgagatcgaacgaactattgtg
cagctggaaaatgaaatttctcaaattaagcagcaacatggcgaggcaaacaaagaaaac
atccagcaggacttctaa

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