Sceloporus undulatus (fence lizard): 121929852
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Entry
121929852 CDS
T07740
Symbol
RBCK1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04217
Necroptosis
sund04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121929852 (RBCK1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121929852 (RBCK1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sund04121
]
121929852 (RBCK1)
Enzymes [BR:
sund01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121929852 (RBCK1)
Ubiquitin system [BR:
sund04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121929852 (RBCK1)
Multi subunit type E3
LUBAC complex
121929852 (RBCK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
IBR
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_11
Zn_ribbon_RanBP
IBR_1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
121929852
NCBI-ProteinID:
XP_042321748
LinkDB
All DBs
Position
4:4466977..4492578
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AA seq
517 aa
AA seq
DB search
MEEATRKAEQQALKLSEAIRGGDEQAAQECAAWLAERCLPVTVQVKPETRAKHDIRLWVG
VEDAHMRTVPIYLKVQPCMTLASLKDMMFLHYGFPPSIQKWVVGQRLPRDHETLHYHGIQ
RDGDAVYLYLLSAKAAKLSKDTLERDHQRRQLEELGIKDGILVPRGVAEAAALTPEEPLG
LPDPSAERSDTASLLPVMPLKVGWECPTCTYINKPTWPGCEMCCTERPKGYVMPEDYQPD
EEEMERMQKEEEATWQYEQAREQQKQKNYQELLQLDGQSLVPADEAVECPICFMAVEPGE
GVTLRECLHSFCKDCLRGTILNSQEPEVHCPYIDENYSCPSELLEREIKALLSEAEYQRF
LDLGISIAENRSRSSYHCKTTDCRGWCFYEDDVNEFSCPVCQKVNCLLCQAIHENMNCKE
YQDDLQLRAQNDQAAQQTTQMLLKMVQNGEAMYCPMCKIIVQKKDGCDWIRCTVCHTEIC
WVTKGPRWGPAGSGDTSGGCRCKVNGVPCHPHCQNCH
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcaaccagaaaagctgaacaacaggccctgaagttgtcagaagccatccga
ggaggagacgagcaggcagcccaagagtgtgccgcctggctggctgagcgatgcctccca
gtcacggtgcaggtgaaacccgaaacccgtgccaagcatgacatcaggctgtgggtaggt
gtggaagatgcccacatgcgcaccgtccctatatacctgaaggttcagccctgcatgacc
ttggcatccctcaaagacatgatgttcctccactacggtttcccccccagcatacagaag
tgggtggttggacagaggctgcctcgagaccacgagactcttcactatcatggcatccag
cgagacggggatgctgtttacctctacctcctttcagccaaggcagccaagctgagcaaa
gataccttggaaagggaccatcaacgtaggcagctggaagagttgggcattaaggatggc
atcctggtgccccgaggggtggcagaagcagcagccctgactccagaggagcccttgggc
cttccagatcccagcgcagagaggagtgacaccgcttcacttcttccggtgatgccccta
aaggttggttgggagtgccctacctgcacctacatcaataagcccacatggcctggatgc
gagatgtgctgcacggaacggcccaaggggtacgttatgccagaagactaccagccggat
gaagaggagatggagcggatgcagaaggaggaggaagccacgtggcagtatgaacaggcc
agagagcagcaaaagcagaagaactaccaggaactcctgcaactggatgggcagagcttg
gtgccagctgatgaggccgtggagtgcccgatctgcttcatggccgtagagcctggcgag
ggggtgaccttgcgggaatgcctgcattccttctgcaaggattgtctgagaggaactatc
ttgaatagccaggagccagaagtccattgcccttacattgatgaaaattactcctgccca
tcagagttgctggagcgtgagatcaaagcgctgctgagtgaagccgagtatcagcgcttc
ttggacctgggcatctccattgctgaaaaccgcagtcgttccagctatcactgcaaaacc
acagattgccggggctggtgtttctatgaggatgacgtcaatgagttttcttgcccagtg
tgtcagaaggtgaactgtctcctttgccaggcgatccacgaaaacatgaattgcaaggag
tatcaagacgacctccagctccgagctcaaaatgatcaggctgcgcagcagaccacgcag
atgttgctgaaaatggtgcagaacggggaggccatgtactgccctatgtgcaagatcatt
gtccagaagaaagatggctgtgactggatccggtgcactgtctgccacacagagatctgc
tgggtgaccaaaggcccacgatggggcccagcgggctctggtgatactagcggaggttgc
cgctgcaaggtgaatggcgttccctgccaccctcactgccagaactgccactga
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