Sceloporus undulatus (fence lizard): 121929940
Help
Entry
121929940 CDS
T07740
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121929940 (FUBP1)
03041 Spliceosome [BR:
sund03041
]
121929940 (FUBP1)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121929940 (FUBP1)
Spliceosome [BR:
sund03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121929940 (FUBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
KH_KHD4_2nd
Secretin_N
SIMPL
Motif
Other DBs
NCBI-GeneID:
121929940
NCBI-ProteinID:
XP_042321908
LinkDB
All DBs
Position
4:complement(96787508..96823937)
Genome browser
AA seq
723 aa
AA seq
DB search
MSDYSTVPPPSSGPPGGGGGGGGGGGGGGGGAVNDAFKDALQRARQIAAKIGNESGTSVN
SNDYSYGGQKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPEPKKVAPPNNDSFGNQLPPM
HQQQRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT
PESVQSAKRLLDQIVEKGRPTPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQE
RAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLDLIRDQGGFREVRNEYGSRIG
GNEGLDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQ
HAAEIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIG
KGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP
LGPPVPHGPHGVVPGPHGPPGPPPGAPMGPYNPAPYTPGPPGPAPHGPPAPYAPQGWGNA
YPHWQPPNPPDPGKPTDPNSAAWAAYYAHYYQQQAQPPPAAPPSAPPATQTNGQGDQPNP
APAGQVDYTKAWEEYYKKMGQQGQPQDYSKAWEEYYKKQGQAVPAPAGAPPAGQPDYSAA
WAEYYRQQAAYYAQTSPQGMPQHPPAPQCLPRPSTLGSAAKSTGKHNLRKCINTYFSILM
LSL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactactctacggtgccccctccttcctcgggtccccccggcggaggcggagga
ggaggaggcggcggcggcggaggaggcggaggggcggtcaatgacgcttttaaggacgcg
ctgcaacgggccaggcagattgcagcaaaaattggaaatgaatcagggacatcagtgaat
tcaaatgactacagttatgggggacaaaaaagacctcttgaagatggagatggctcttgg
acaagtccgagcagtacaacacactgggagggaatgccctctccttttaaagatcagcca
gagcctaagaaggttgcgcctccaaataatgattcttttggaaaccagttaccacccatg
catcaacaacagagatctgtaatgacagaggaatacaaagttcctgatggaatggttgga
ttcataattggcagaggaggagaacaaatatctcgtatacaacaagaatctggatgcaaa
atacagattgcgcctgatagtggtgggctgcctgaaagatcttgcatgctaactggaact
ccagagtcagtacagtctgcaaagaggttgcttgatcagatagttgaaaaaggaagacct
acaccaggattccaccatggtgatggtccaggaaatgcagtccaagaaattatgattcca
gcaagcaaagcaggattggttattggaaagggtggagagacaataaagcaacttcaggag
cgagcaggcgttaagatggtaatgattcaagatggaccacagaacactggagcagacaaa
cctcttagaatcacaggagatccttacaaagttcaacaagccaaggaaatggttttagac
ctcattcgtgatcaaggtggttttagagaggtgcgcaatgaatatggatcaagaatagga
ggcaatgaaggactagatgttccaataccacgatttgctgttgggattgtaattggaaga
aatggggaaatgataaagaaaatacagaatgatgctggtgtgaggatccagtttaaacca
gacgatgggacaactccagacagaatagcacaaatcacaggtcctccagacagatgccag
catgcagcagaaattattacagatcttcttcgaagtgttcaggctggtaatcctggtggt
ccagggcctggaggtcgtggaagaggtagaggtcagggcaactggaatatgggaccacct
ggtggactgcaagaattcaatttcattgtgcccacgggaaagactgggttaattattggg
aaaggtggtgaaactatcaagagcattagtcagcaatctggtgctagaatagaacttcag
agaaatcctccaccgaatgccgaccctaacatgaaactgtttactatccgggggacacct
caacagattgattatgctcgtcagctcatagaagaaaagattggaggtccagtgaatcca
ttgggtccacctgtgccacacggacctcatggtgttgttcctgggccacatgggcctcct
gggccgccgcctggggctccaatgggaccttacaatcctgctccttacacgcctggccct
cctggtcctgcacctcatgggcctccagcaccatatgcaccacaaggatggggtaatgcg
tacccacactggcagccacccaatcctccagaccctggtaagccaacagatcctaattcg
gcagcatgggcagcctattatgctcactattatcagcagcaagcacaaccgccgcctgca
gctccacctagtgctccaccagccactcagaccaatggacaaggagatcaaccaaatcca
gcaccagcagggcaggtagattacaccaaggcatgggaagaatactataaaaaaatgggt
caacaagggcagccacaagattattcaaaagcttgggaggaatattacaagaagcaaggt
caggcagttccagctccagccggagccccaccagccggtcagccagattatagtgcagcg
tgggctgaatactatagacagcaggcagcctattatgcccagacaagtccacaaggaatg
ccacaacatcctccagcaccacagtgccttcccagaccttccaccttaggttctgctgca
aaaagcacaggtaagcacaacctaaggaagtgtataaatacatatttcagtatattaatg
ttgtccctgtga
DBGET
integrated database retrieval system
