Sceloporus undulatus (fence lizard): 121929994
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Entry
121929994 CDS
T07740
Symbol
XRCC5
Name
(RefSeq) LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
121929994 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sund03400
]
121929994 (XRCC5)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
121929994 (XRCC5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
CttA_N
Motif
Other DBs
NCBI-GeneID:
121929994
NCBI-ProteinID:
XP_042322046
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Position
1:246332782..246404015
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AA seq
730 aa
AA seq
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MSRAKAAVVLCMDVGFSMSHSGPGEESPFEQSKKVMTMFVQRQVFAESKDEISLVLFGTE
NTANSLASGDQYQHIAVHRHLMLPDFDLLEDIQNVIQPTSEQGDILDALIVCMDLLQRET
MXGKKYDKRHIEVFTDLGSPFSEDQLDVIIANLKKTGISLQFFLPFPVNDEGGSGDKIDR
VQSNRQQNSFPRKGLSDQQKEGLQMVRKLMLSLDKEDGLEDIYTFRESLERLSMFKKVER
RPMSWPCQLTIGSKLSIRIVAYKSFTEEKVKKSWMSVDAKTLKKDDVQKETVYCLNDDDE
TEIQKEDVIQGFRYGSDIIPFSKVDEEQMKYKTDGKCFAVLGFSRSSQILRHRYMGSQVL
KVFAAKDDEAAAVALSALIHALDELDMVAIVRYVYDRRSQPQVGAAFPLIKNEYECLAYV
QLPYMEDLRQYMFSSLKNNKKCLPTEDQLLAVDSLIDSMSLVYEDESEGTVEDIFKTSKF
PNPQFQRLYQCLQHKAFHPDAPLPPIEKHLLDMLETPQEVREQYQIPLEKVKSLFPLKDV
GKMKEQKTAQHIFKDNNEDEASSKKAKPEDDEVGFRIADLAEGNVTAVGSVNPVENFRVL
VRQKTADFKEVSQQLIKHIHQFLENRGHLYYSKSIDCIKALRAEAIKLSEVQYFNDFLEA
LKKRVEDKNLADFWEIIIQDEISLITKEESGGSCLTAEDARKFLAPKDKPMEVSPVTDEG
GDVDDLLDMI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgcgaaggccgcagtggtgctatgtatggatgttggcttttcgatgagccat
tctggtcctggagaggagtctcctttcgaacaatccaagaaagtaatgacaatgtttgtg
caacgacaggtgtttgcagagagtaaagatgaaatttcgttggttttatttggcacagag
aacacagcaaacagtcttgccagtggggatcagtatcagcatattgctgtgcacagacac
ctgatgctgccggattttgatttgttggaagacatacaaaatgtgattcagcctacctct
gaacaaggagacattctcgatgctctgattgtgtgtatggacttgcttcaaagagagaca
atgtaaggaaaaaaatatgacaagcgacacattgaggtttttactgaccttggcagtccc
ttcagtgaggatcaactggatgttatcattgctaacttgaagaaaacagggatttcactt
cagtttttcttgccatttccagtgaatgacgaaggtggaagtggggataagattgatcgt
gtacagtctaataggcagcaaaactcttttccaagaaaagggctatcggaccagcagaaa
gaaggccttcaaatggtgcggaagctgatgctttcactagacaaagaagatggcctggag
gacatttacactttcagagagagtctggagcgtctttcaatgtttaagaaggttgaaagg
aggcccatgtcttggccctgccaacttacaattggttctaaactatctataaggattgtg
gcttataaatcattcactgaggagaaagtgaaaaaatcctggatgtcggtggatgcaaag
actctaaaaaaagatgatgtgcagaaagaaacagtttattgcttgaatgatgatgatgaa
acagagatccaaaaagaggatgttattcaaggatttcgctatgggagcgacataattcct
ttctctaaggtagatgaggagcagatgaaatacaaaacagatggaaaatgttttgctgtc
ttggggttcagcagatcatctcagatcctgagacatcgctacatggggagtcaggttctg
aaggtctttgcagcaaaggacgatgaggctgcagcagttgctctttctgcgctcattcat
gctttggatgagttggatatggtagccattgtgcgttatgtctatgatagaagatctcag
cctcaggttggagcagcctttccattgatcaagaatgaatatgagtgcttggcatatgta
cagctaccttatatggaagatttgagacaatacatgttttcctccttgaagaataataaa
aagtgtttaccaacagaggatcagttgctggcagttgactctctgattgattccatgagt
ttggtttatgaagatgaaagtgaagggacagttgaggatatatttaaaaccagcaaattt
ccaaatcctcagtttcaaagattgtatcagtgcctacaacataaagctttccatcctgat
gcacccttgcctcctattgaaaaacatctcttagacatgttggagacacctcaggaagta
agagagcaataccagattcctcttgaaaaagtaaaatcgctttttccattgaaggatgta
ggcaagatgaaagaacagaaaacagctcagcatatcttcaaagacaataatgaagatgaa
gccagtagtaaaaaagcaaaaccagaagatgatgaagttggttttaggattgcagacctt
gccgaaggcaatgtcactgcagttggaagtgttaatccagtagaaaatttcagagtgctg
gtgcggcagaagacagctgacttcaaggaagtcagtcagcagctaataaaacacatccac
cagtttttggaaaacaggggtcatttatactattcaaagagcattgactgcataaaagct
ctcagagcggaagccattaagctgtcagaagtgcagtactttaatgattttctggaggct
ctgaaaaaaagggtggaagataaaaacttagccgatttctgggagattataatacaagat
gaaatttccttgattaccaaagaagaatctggaggaagctgtctgacagctgaagatgcc
agaaagttcctggctcccaaagataagcccatggaagtctcaccagttacagatgaaggg
ggtgatgttgatgatcttctggatatgatttaa
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