Sceloporus undulatus (fence lizard): 121930095
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Entry
121930095 CDS
T07740
Symbol
COL22A1
Name
(RefSeq) collagen alpha-1(XXII) chain
KO
K16630
collagen type XXII alpha
Organism
sund
Sceloporus undulatus (fence lizard)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
121930095
NCBI-ProteinID:
XP_042322222
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All DBs
Position
4:complement(242569380..242806235)
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AA seq
1618 aa
AA seq
DB search
MEKEGVMFLARRYQIPSLLILLLLLWGGENTQAQRAGCKNVHYDLIFILDTSSSVGKEDF
EKVRQWVANLVDTFEVGPDKTRVGVIRYSDRPTTEFDLGRYQTWEEIKEAAKNIKYYGGN
TNTGDALRYINRYSFSAEAGGRPSDSAIKKVAILLTDGRSQDYVLDPATAAHKAGIRIFA
VGVGEALKEELDEMASEPKSAHVFHVSDYNAIDKIRGKLRRRLCENVLCPSVHVEGDRFK
HTNGETDDIPGFDLMEQFSVREIFGMKDNGIHSSYVRLGSFPIVQKTEDVFPQGLPDEYA
FVTTFKFRKASRREDWYIWQIIDKYGIPQVSIRLDGENKALEYNAVGLTKDAVRVVFRNG
RVSDLFDRNWHKIALSIQSQSVSLYIDCKLVQTLPIEDRENIDIQGKTVIGKRLYDSVPI
DFDLQRMVIYCDSRHAELETCCDIPSGPCQVTVITEPPLPVVTPTPGSEQVGPIKTVNCS
CPAGEKGERGLPGFEGLRGQKGEVGSAGLPGPKGEKGEPGGGGFGRGEKGEKGERGLQGL
PGLMGERGEKGSLGAPGIPGRDGTKGTTGEPGLPGAVGLPGPPGLKGTDGQPGPPGRQGY
VGAPGLQGERGEKGPKGEKGEPGLDGFPGKPGVDGKQGIKGSPGQPGLMGPRGEKGEIGP
PGKPGSAVQTEGLKGEQGAPGPRGAIGPPGTPGSPGPPGPEGKPGLPGLQGQRGKKGELG
LPGIDGLAGPPGPPGPPGVAGPAGPAGSPGLPGEIGRNGQPGPPGLPGKPGLEGLPGLPG
SKGEPGERGEDGFPGKMGLKGETGEPGRPGITGERGDAGLPGPSGLPGLRGEKGDQGEKG
RAGLPGFKGERGDKGDAGSPGPPGLPGTTTLVTPHPRIPGEQGPKGDRGERGEPGGSGIP
GKQGPPGFAGQQGLKGQEGAIGPPGVPGEAGAPGPAGPPGPRGLPGNVGIPGDPGRPGND
GLKGEKGDPGKEGKPGIPGPRGETGPVGEPGAPGKGRDGERGERGPPGLSGPYGPKGDRG
SPGVPGQPGDRGVPGIGLAGPPGPVGPPGDKGPTGPRGLPGMQGPPGQSGQDGLPGNPGE
RGPPGKPGASPLLSPGDISLLVKDVCSDCPPGPPGLPGMPGFKGDRGLPGPLGTEGPVGK
TGEAGPRGHPGPPGLEGPKGPKGDRGSSGEVGLKGEQGHPGIPGFMGPPGNPGPPGSEGS
PGQMGPPGNPGEIGKEGPPGPQGPPGLPGLVGISGKDGKDGKPGPAGEPGKPGEPGLPGP
EGGRGPPGFKGPRGDAGAPGSRGEPGQPGTPGREGQSGKDGDPGPAGPQGPRGLRGLSGK
NGPPGPPGETGPSGNPGPKGSKGETGSPGLPGFIGPRGPPGEAGEKGPPGKEGSPGKPGE
LGVKGDRGDPGTKGEKGPAGEKGPPGEPGLPGRKGHTGLMGPPGPSGDTGQTGPPGPPGQ
PGFQGPRGDSPSMETLRRLIQEELGKQLDARLPYLMSQMQPAHVKAPQGRPGPPGSPGKE
GPPGRAGPPGEPGRPGQPGSEGPVGPMGPKGERGDKGEKGDAGIGQRGEKGPPGIPGVPG
EPGYGKDGVPGAQGPQGEAGVPGLMGPAGPPGANGQCDPSQCAYYASLAARPSNVKGP
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagggagtcatgttccttgcaagaagatatcagatcccttctctcttgata
cttttgctacttctgtggggcggagagaacactcaggctcaaagagcaggttgtaagaat
gttcactacgatctcatcttcatcttggatacctcctccagtgtgggcaaagaggacttt
gagaaggttcgccaatgggtagctaatttagtagacacctttgaggttggaccagacaaa
actcgcgttggtgtcatccgctatagtgatagaccaaccactgagtttgaccttggaaga
taccaaacttgggaagaaatcaaggaggctgcaaagaacatcaaatattatggaggcaat
acaaacacgggtgatgccttgaggtacattaatagatacagcttttctgcagaggctggt
ggaaggccaagtgacagcgctatcaaaaaagtagctatccttctaactgatggtcggagc
caggattacgtcttggatccagccactgcagcacataaagcaggaatcaggatctttgct
gtgggtgttggagaggcacttaaagaagaactggatgagatggcatctgagcctaaatct
gcccatgtcttccatgtgtctgattacaatgccattgataagattcgtggaaagctgagg
aggaggctttgtgagaatgtgctgtgtccaagtgtccatgtggaaggagatagattcaaa
cacaccaatggagaaacagatgatattccaggatttgacctgatggaacaattcagtgtc
cgggagatatttggaatgaaggacaatggaatccacagctcttacgtgcggcttgggagc
ttccccattgtgcagaaaacagaagatgtcttcccacaaggccttcctgatgaatatgcc
tttgtgaccactttcaagttccgcaaggcttccaggcgagaagactggtacatttggcaa
atcattgacaaatatggcatacctcaggtctctatccgactggatggtgaaaacaaggcc
ttggagtataatgctgttggactcaccaaggatgcagtcagagtggtctttagaaatggc
cgtgttagtgacctgtttgaccgcaactggcataaaattgctttgagcatccagtcccaa
agtgtctccctgtacattgactgcaaattggttcaaacattgcctattgaagaccgggaa
aacattgacatccaaggaaagacagtgattggcaaacgcctatatgacagtgtaccaatt
gattttgaccttcagcggatggttatctactgtgattcacgacatgctgaactggaaacc
tgctgtgatattccttctgggccctgccaagtgaccgtgattacggaacctcctcttcct
gtagttactcccactcctggtagcgaacaggttggacccatcaagactgtcaactgttct
tgtccagcaggagaaaagggtgaaagaggcttgccgggttttgaaggtttgagaggccaa
aagggagaagttggatcagctggacttcctggcccaaagggagaaaaaggagaaccaggt
ggaggaggatttggccgaggagaaaagggagaaaagggtgaaaggggactccaaggatta
cctgggctgatgggagaaagaggagaaaagggctctcttggtgcacctggcatcccaggg
agagatggcaccaaaggaacaactggagagccaggtcttcctggagcagttggactccct
gggcctcctggattgaaggggacagatggtcagccaggtccccctggccgccaaggttat
gttggagcacctggtcttcagggagaaagaggagaaaagggacccaagggagaaaagggg
gaaccaggtcttgatggttttcctggaaaacctggtgtggatggtaaacagggcatcaaa
ggaagtccaggccaacctggtctcatgggacccagaggagaaaagggtgaaataggacct
ccaggaaaacctggttcagcggtgcagactgaaggtttaaaaggagagcagggagctcct
ggccctcgaggagcaataggacctcctggaacaccaggcagccccggacctccaggacca
gagggcaagccaggacttcctggattgcaaggtcaaaggggcaagaaaggtgagcttggt
ctcccaggaattgatggattggcaggacctccgggtccaccaggtcctcctggagttgct
ggtcctgctggtcctgctggctctccagggttacctggagaaataggaagaaacggacag
cctggaccacctggtttacctggaaaacctggcctggaaggtttacctggacttcctggt
tcaaaaggagagccaggagagagaggagaagatggtttccctggtaaaatgggcctcaag
ggtgaaactggagagcctggccggcctggtattacgggtgagaggggtgacgctggactt
ccaggcccatctggtttgccagggctgagaggagaaaaaggagatcagggtgaaaaagga
agagctggccttcctggcttcaaaggagaaagaggtgacaagggtgatgctggttctcct
ggcccaccaggcttaccgggaacaaccacattggttacacctcatcctaggatacctggt
gaacaagggccaaaaggtgaccgaggagaaagaggtgaacccggaggatcgggaattcca
ggcaaacagggaccacctggatttgcagggcagcagggtctgaaaggacaagaaggagcc
ataggaccacctggagtcccaggagaggctggtgctcctggacctgcaggccctcctggc
ccacgaggccttcctggaaatgtgggtatacctggtgatcctggccgaccaggaaatgat
gggctaaaaggagaaaagggagatcctggaaaggaagggaaaccaggaatccctgggcct
agaggtgagacaggacctgtcggagaacctggagcgcctggcaagggtcgagatggagaa
aggggtgaaagaggaccaccaggattatctggaccctatggacccaagggagatagaggt
tctccaggtgttccaggacagccaggagacagaggcgtgccaggcattggacttgctgga
ccacctggacctgttggaccacctggagataaagggcctacgggcccccgtggtttgcca
ggcatgcaaggcccacctggacaatcaggacaagatggtttaccaggaaatccaggtgaa
agagggcctccaggaaagccgggtgcatctcccctcctttcacctggtgatatcagccta
ctggttaaggatgtttgtagtgactgtcctcctggacctcctgggcttcctgggatgcct
ggattcaaaggtgatagaggcctcccaggcccactgggtactgaaggcccagttggaaag
acgggggaggctggacccagaggtcaccctggcccaccaggtttggaaggtcccaagggt
cctaaaggggatcgtgggtcatctggtgaggttggactgaagggtgagcagggccatcct
ggaatacctggcttcatgggtccacctggaaatccaggtccacctggatcagagggctcc
ccaggacaaatgggaccaccaggaaatcctggagaaataggtaaagaagggccaccagga
cctcaggggccaccaggattgccaggacttgtgggtatctctgggaaggatggcaaagat
ggcaagccaggaccagctggagaaccaggcaagccaggagaacctggactcccagggcca
gagggagggaggggcccaccgggttttaagggacccagaggagatgcaggggcccctggc
tcaagaggagaaccaggccaaccaggaacccctggccgggagggacaatctggaaaagat
ggagatccaggtcctgcaggccctcaaggaccacgaggactcagaggactttcaggcaag
aatgggccaccaggaccaccaggagagactggcccttcaggtaacccaggtccaaaagga
agcaaaggtgaaacaggcagcccaggacttcctggattcattggcccacgtggaccccct
ggagaagctggtgaaaagggccctccagggaaagagggctctccagggaaaccaggtgaa
cttggagtcaaaggtgacagaggagatcctggaacaaaaggtgaaaaaggacctgcagga
gaaaaaggcccacctggagaacctggacttccaggtcggaaaggacacactggattaatg
ggtccaccgggaccttcaggagatacagggcagactggaccccctggtcctccaggacaa
cctggatttcaagggcctaggggggattctccatcaatggaaacgttgcgaagacttatc
caggaagagctaggaaaacaacttgatgccaggctgccctatctcatgagtcagatgcaa
ccagcacatgtcaaagcacctcaaggtaggccaggacctccaggatcaccaggaaaggaa
ggtcccccaggcagagctggacccccaggagaacctggtagacctggacagccaggttct
gaaggacctgtaggaccgatgggaccgaaaggtgaaagaggagacaaaggagaaaaagga
gatgcaggcattggtcaacggggtgaaaaaggtcccccaggaataccaggtgtcccaggt
gaacctggctatggcaaagatggggtaccaggcgcacaaggccctcaaggtgaagcaggt
gtgcctggacttatggggcccgcaggtcctccgggagccaatggacaatgtgacccatct
cagtgtgcttactatgcaagcctggctgcccgacccagtaatgtaaaggggccttaa
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