Sceloporus undulatus (fence lizard): 121930101
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Entry
121930101 CDS
T07740
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121930101 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sund04121
]
121930101 (NHLRC1)
Enzymes [BR:
sund01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121930101 (NHLRC1)
Ubiquitin system [BR:
sund04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121930101 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-C3HC4_4
Baculo_IE-1
RING_XB3-XBAT31
Beta-prop_EML_2
zf-C3HC4_2
Prok-RING_4
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
121930101
NCBI-ProteinID:
XP_042322228
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All DBs
Position
4:complement(174085807..174088226)
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AA seq
401 aa
AA seq
DB search
MSAKTSKKIQTMTELVDQTENCLLECKVCFEKYNEQKKHRPRNLPCGHVMCFECVTSLAH
PRTFKLECPFCRRICKSSETSDCLPLLHLMEILNPSVNNAPVPGRTIGRTAEDVSTPASQ
VLTFTLSFGGWGTLINPTGIAVCQKSGCAAVVHDGKKRIKLFTFTGNCMQQFGERGQAGN
DIRYPNDITATLDGHVVITDSGDHSVKVFDFNGRGKLVISESFCLPWGLATTPQNEIIMT
DSEAGTLYCLSADFKRGELKGVRKLHSDLCNPRKVAVSQTSGAIAVIEHLMAKGPSYGST
RVKVFSADMQVIGQVDSFGLNLVYPFKIYASGVTFSKEGHVIVTDAYNQAVFCLGKPEEF
PACKPLITQGLSYPLALTFTTDNSLIVLDGGDHSLKVYTFK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaagacctctaagaaaatacaaacaatgactgagctggtagatcaaactgag
aactgtctgcttgaatgcaaggtgtgctttgaaaaatacaatgagcagaaaaaacaccgg
ccaaggaacttaccatgtgggcatgtgatgtgcttcgagtgtgttacgtctttggctcac
ccccggacctttaagttggagtgcccgttttgtcgcaggatttgcaaatcttcagagacc
agcgattgtttgccattgctgcacctgatggaaatcttgaacccttctgttaataatgct
ccagttccaggaaggaccatagggaggacagctgaggatgtgtcgaccccagcttctcag
gtcttaacattcactctttcctttggaggatggggaacactgatcaacccaacaggaatt
gccgtgtgtcagaagtctggttgtgcagcagtggttcacgatggcaagaaacggattaaa
ctgtttactttcactggaaactgcatgcaacaatttggcgaaagaggacaggcaggaaat
gacatcaggtacccaaatgatatcacagccacactggatggtcatgtcgtcatcacagac
agcggggatcattcggtgaaagtgtttgattttaatggcagaggcaaactggtcatctca
gagtccttttgtttaccctggggattggctactacacctcagaatgaaattatcatgaca
gattcagaggcaggtactctgtattgcttgagtgctgactttaaaaggggggaattaaag
ggagtgagaaaactgcattctgatttgtgcaacccaagaaaagtggctgtttctcagacc
tctggagccattgcggtcatagaacatttgatggcaaaaggaccaagttatggcagcaca
agagtgaaagttttcagtgcagatatgcaggtcattggtcaggtggacagttttggtctg
aatctagtttatcctttcaaaatttatgccagtggtgtgaccttcagcaaggaaggtcat
gtaatagttaccgatgcttacaaccaagcagtattctgtctaggaaaacctgaagaattc
cccgcatgcaaacctttaattacccagggtctttcttaccccttggcattaacatttaca
acagataattctctgattgttttggatggtggcgatcattccttaaaagtatatactttt
aagtga
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