Sceloporus undulatus (fence lizard): 121930137
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Entry
121930137 CDS
T07740
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121930137 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121930137 (TPR)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121930137 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-GeneID:
121930137
NCBI-ProteinID:
XP_042322299
LinkDB
All DBs
Position
4:118985837..119054581
Genome browser
AA seq
2368 aa
AA seq
DB search
MAAVLQQLLERAELAKLPKAVQGKLERFLADQQSEIDALRSRHERYKVDSEQQYFEVEKR
LAQSQERLVSETQECQNLQQELNKHGEQLKLLTERNKELEAAQDHSVSIQSQLTRAKEEL
EAEKRDLVQTSERRAQELERLNEDVKRLNEKLTAANTAKIELQLNLDELQTSALSVKHRE
QRMEQEKELLQNQNTWLNGELKTKTDEILHLAREKGNEILELKCSLENKKDEVSRLEDQV
SGLKQSNENLQKHVEDLLVKLKEAKEQQAGMEERFHNELNAHIKLSNLYKSAADDLEAKS
NELTQAVDELHKLLKEAGEANKEAQDRCTEMEQSKAAIEKELKEKISKLEKELDNANDLI
SATKRKGAVLSEDELAAMSPTAAAVAKVVKPGMKLTELYNAYVEAQDQLLLEKLENKRIN
KYLDEIVQEVEAKAPILKRQREEYERSQKAVASLSAKLEQAMKEIQRLQDNADKANKQAS
QLERENQRLENQVRDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVITQHLVSY
RNIEELQQQNQRLLVALRELGEAKEKEEQEATSSKISELQSQLGEAISELEKLRESRHHQ
MQLVDSIVRQRDMYRILLAQTTGVAIPLQATSTLSEDMSVTSTPKRFSGTPQAMSTPASL
PVSESTEAAEAKAALKQLQEFFESYRKEKAENDKLLNEQNEKLQEQVTDLRSQNTKISTQ
LEFASKRYAMLQDNVEGYRREITSLHERIQKLSATTQKQEQIINTLTQELRGANEKLAVA
EVRAENLKKEKDILKMAEVRLNQQKESLIAEQRGQNLLLTNLQSIQVILERAETETQQRL
NNQIEKLEREIAQLKKRLENEAEQRHALTKNQDVHLLDAKRQLETEINFHANTKELLKNA
QKEITTLKQQLHNIEAQLASQSLQRPPTQGHPSSSEDTDDLVSRLRQSDEQVNDLKERLK
TATSNVEQYRAMVVNLEESLNKEKQVTEEVRAAVEARLKESSEYQTQLEKKLMEAEKEKQ
QLQDEEQKAVENMEQQLSELKKNLASMKSEVQEALQRASAALSNEQQAKRDCQEQAKIAA
EAQNKYERELMLHASDVEALQAAKEQVAKNSAIRQQLEDAAQKAESALRENKASWEELER
TLKDEASKLASRCEDLEKQNRLLHEQLETLSEKMVSSVKEGMPGALNVSLSEEGKSQEQI
VEILRFIRREKEIAETRFEVAQVESLRYRQRVEHMERELQELQQSLNAEREKMQVTAKTI
AQHEELMKKTETMNVLTETNKMLREEKERLEQELQQMQAKVRKLEADILPLQESNAELSE
KSGMLQAEKKLLEEDVKRWKARTQHLLSQQKDTDVEEYRKLLSEKEVNNKRIQQMSEEIG
RLKAEIARSNASLTTSQNLVQSLREDLTKTKTEKEALQKELEIKVTDIQEKVKTITQVKK
IGRRYKTQYEELKAQHDKVIAEASTQSYAEQQQEQQASDKEIQEVKEALIQAEAKIKALE
GQIENLQKTLGEKDTEGKTLQEQIAQLQSEVSRLHQDLQEKTIQEEQLRQQVTEKEEKTK
KTLLAAKQRIAQLAGVKEQLSKENEEWKQKSSTLEEQKTEMEVRMSALKSQYEGRICRLE
RELREQQERHHEQRDEPAESTNKAPEQQRQITLKSTPAAGDRGIASTSDPPTANIKPTPV
VSTPSKVTAAAIAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQEAMQSEGP
VEHVPVFGSTSGSVRSTSPNVQTSLSQPILTVQQQTQATAFVQPTQQSHLQIEPATQDPS
PTILEVVQSSQTERPSTSTAVFGTVSATPSSSLPKRTREEEDDNTVENSEQIPEEMVDMP
VPKKMRTVQRVGPEEEVTAEESTDGEIEAQAYNQDSQDSIGEGVTQGEYTPMEDSEETSQ
SIPIELGSLQSDQQNTTSSQDGQGKRDDVIVIDSDDEEEDDDENDGEAEEYEDEEDDDED
EDDEDTGMGDEGEDSNEGTGSVDGNERYEGDEAEGPDGVDPSTETEDSIAGGESSQRAAD
SQNCGEGNTGAAESTFSHESPREQQPTSASERQVPRPPRPHPLPPRLTIHAVPAPPQELG
PPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHS
PQVAGVPRFRFGPPEDMPQTSGQSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPL
QVAAPVSVFTESSTADASEHASQSVPMVTTSTGNLSTTSESGTGDDGDEVFVEAESEGIT
SEVGLEIDSQQEEESSQTPDESDLPSTSQDPPSSSSADTSSNHPKPFRRVRLQPPTLRTG
VRGRQFNRQRGVTHAMGGRGGLNRGNIN
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgctgcagcagctcctggagcgggccgagttggccaagctgcccaaggcc
gtgcaagggaagctggagcggttcctggccgaccagcagagcgagatcgacgccctccgc
agccgccacgagcgctacaaggtggacagcgaacaacaatattttgaagtggaaaaacga
ctggctcagagtcaggagagacttgtaagtgagacacaagaatgtcagaatctccaacag
gaactcaacaagcatggtgagcagctgaagttgctgactgagagaaataaagaactagaa
gcagctcaggatcacagtgtatccatacagagtcaattgactagagcaaaagaagaattg
gaggcagagaagagagatttggtccaaacaagtgagagaagagctcaagagctggagcgc
ttaaatgaggatgttaagcgtctgaatgagaaacttacagcagcaaatactgcaaagata
gaactacagttaaaccttgatgagcttcagacatcagccctttctgtaaaacaccgtgag
caaagaatggagcaagaaaaagaattgttacagaatcagaacacttggctgaatggagag
ctgaaaacaaaaacagatgagatcctgcatcttgcacgggaaaaagggaatgaaattttg
gagcttaagtgtagcctagagaacaaaaaagatgaggtttccaggctggaagatcaagtc
agtggacttaaacagtccaatgaaaatctgcagaaacatgtggaagatcttttagtgaaa
ctgaaagaggcaaaagaacagcaagctggtatggaagaaagattccataatgaattaaat
gcccatatcaagttgtctaatttatacaagagtgctgctgatgacctggaggcaaaaagc
aatgagttgactcaagctgtagatgaattgcacaaactcctgaaagaggcaggtgaagct
aacaaagaagcgcaggaccgttgcactgagatggaacagtcaaaggctgcaatagaaaaa
gaactgaaggaaaagattagcaagctggagaaggagctggacaatgcaaacgatttgatt
tcagccaccaagcgtaaaggagctgttctttcagaggatgagctggcagcaatgtctcct
acagctgctgcagtagcaaaagtggtaaagcctggcatgaaattaactgagctgtacaat
gcatatgtagaagctcaagatcagctgttgctggaaaaactggagaataaaaggattaat
aagtacttggatgaaatagtgcaagaagtagaagccaaagcacccattttgaaacgccag
cgtgaagaatatgaacgatcgcaaaaagctgtagcaagtctttctgctaaacttgagcaa
gctatgaaggaaattcaacgcttgcaagataatgctgataaagcaaacaagcaagcttct
cagcttgagagagaaaaccagaggcttgagaaccaagtcagagatctttcacaacagata
agagtgcttttgatggaacttgaagaagctcgaggcaatcatgtcatccgtgatgaagaa
gtgagctctgctgatatcagcagctcttctgaagtaataacccagcatctggtctcctac
agaaacattgaggaactccagcagcaaaatcagcgcctcttggtagctcttcgagagctg
ggtgaggctaaagagaaagaggagcaagaagccacttcatctaagatttcagagctgcag
agtcaacttggagaagctatcagtgaattagaaaagttgcgtgagtcacgccaccatcag
atgcagcttgtagactccatagttcgtcagcgtgacatgtatcgcatcttgctagcacag
accactggagttgccattccattgcaagctacaagcaccttatcagaagacatgtctgtg
acatcaacccctaagcgcttctctggtacacctcaggccatgtcaactccagcttctcta
ccagtgagtgaatcaacagaagctgcagaagcaaaggctgcccttaagcagttgcaggag
ttttttgagagctacaggaaagaaaaggcagaaaatgacaaactgcttaacgaacaaaat
gagaagctacaagaacaggttacagacttgagatcccagaatactaagatttcaacccag
cttgaatttgcctccaagcgttacgcaatgctgcaagataatgtagaggggtatcggcga
gagataacatcacttcatgagagaatccagaagctttcagcaactactcaaaaacaagaa
cagataatcaacaccttgactcaagaactgagaggagccaatgaaaaattagctgtggca
gaggtgagagcagagaatttgaaaaaagaaaaggatatactgaaaatggcagaagttcgt
ctgaatcagcaaaaagaatctttaatagcagaacaaaggggacaaaatctgctgcttaca
aatctgcagtctattcaggtaatcctggaaagggctgaaacagaaactcaacaacggctc
aataaccaaattgagaagctagagcgtgaaatagcccagctgaagaaaaggctagaaaat
gaagcagaacaaaggcatgcacttaccaaaaatcaagatgttcatttgttggatgctaaa
agacagcttgagactgaaataaactttcatgctaatacaaaagagctgttgaagaatgcc
caaaaagaaattacgactttgaagcaacaacttcataatatagaagctcagttagcttcc
cagtcactacaacgacctcctactcaaggccatcccagttcaagtgaagatacagatgat
cttgtaagtcgattgagacaatctgatgagcaagttaatgatttgaaagaaaggctaaag
actgccacaagtaatgtggagcagtaccgagctatggttgtgaatcttgaagaatctctt
aacaaagaaaagcaggtcacagaggaagttcgggcagctgtagaagcccgcttgaaggaa
tcctctgagtatcagacccaattagaaaagaaattgatggaagcagaaaaggaaaaacag
caacttcaagatgaggagcagaaagctgttgaaaacatggagcaacagctttctgagtta
aagaaaaaccttgccagtatgaagtctgaagtccaggaagctcttcagagagcaagtgca
gctctcagtaatgagcaacaagctaaacgggactgccaagagcaagccaaaatagctgca
gaagcacaaaacaagtatgaacgagagctgatgcttcatgcttctgacgttgaagcttta
caggctgccaaagaacaggttgctaagaattctgccatcaggcagcagttagaagatgca
gcacagaaagcagaatctgcattgcgagagaacaaggcctcatgggaggagctagagaga
accctgaaggatgaagcatctaagcttgcatctcgctgtgaagacttggaaaaacaaaac
cgtctgttgcatgagcagctagaaactctaagtgaaaagatggtgtcttcagtgaaggaa
ggcatgccaggtgcattgaatgtgtctctcagtgaagaaggaaaatcacaagagcaaata
gtagaaattcttcggtttatacgtcgagaaaaggaaattgcagaaacaaggtttgaggta
gctcaggtggagagcttacgctaccgccagagggtggagcatatggaaagggagcttcaa
gagctgcagcagagtctgaacgcagagagagagaaaatgcaggtgacagcaaaaacaatt
gcccagcatgaagaacttatgaagaagacagagaccatgaatgtcttgacagaaaccaac
aagatgctgagggaagagaaggaaagattggaacaggagctgcagcaaatgcaagcaaaa
gtacgcaaactggaagctgacatcttgcctttgcaagagtctaatgctgagctgagcgag
aagagtgggatgctccaggcagagaagaagcttctggaagaggatgtcaaacgttggaaa
gcccggacccagcacttactgagccaacagaaagataccgatgttgaagaatatcgaaag
cttctttcagaaaaggaggtgaacaacaaacgtatacagcagatgagtgaagaaataggc
agacttaaagcagaaattgcaaggtcaaatgcatcactgacaacaagtcagaatctggtt
cagtcccttcgtgaagatctgacaaaaacaaaaactgaaaaagaagcccttcaaaaagag
ttagaaattaaagtgactgacatccaagagaaagttaaaacaataactcaagtaaagaaa
attggacgcagatacaagactcaatatgaagagctgaaagcacaacacgacaaggttatt
gcagaagcatccacacagtcttatgcagaacaacagcaagaacaacaagcttcagataag
gaaattcaggaagtgaaagaagctctaatacaagctgaggccaagattaaagctttggag
ggacagattgaaaatttacaaaagactctgggagagaaggacactgaggggaaaactcta
caggagcaaatagcccagctacagtcagaggtttcccgccttcatcaagatttacaggaa
aaaacaatccaggaagaacagctcaggcaacaagtaactgaaaaggaagagaagactaag
aagacccttttggcagccaagcagaggatagcccagttagcaggtgtgaaagaacagctg
agtaaagaaaatgaggaatggaaacagaagagcagcactttggaagagcagaaaactgag
atggaagtgcggatgagtgcacttaagtcccagtatgaaggccgcatttgtcgcctagag
agagagctacgagagcagcaagaaaggcatcatgaacagcgagatgaacctgcagaatct
accaataaggctccagaacagcagagacaaattacgcttaaatcaactcctgcagctggt
gacagaggaatagccagtacttcagatccaccaacagctaacatcaagccaactcctgtt
gtgtcaactccaagcaaagtgacagctgctgcaatagctggaaacaaatcaactccaagg
gccagtatccgtccaatggttactcctgctacagtcacaaaccctacaacaacaccaaca
gccacagttatgccaacaacacaggtggaaactcaggaagctatgcagtcagaagggcca
gttgaacatgttccagtcttcggaagcacaagtggatctgtacgctccactagtcccaat
gtccagacatctctctcacagcctatcttgacagttcaacagcaaacacaagctacagct
tttgtgcagcctactcaacagagccatcttcagatagaaccagccacccaagatccctcc
ccaacaattttggaagtagtacagagctcccagacagagagaccttctacatctacagca
gtatttggcacagtttcagccacaccaagttcttctttacccaaacgtacaagggaggaa
gaagatgataatacagttgaaaactctgaacaaattcctgaggaaatggtggacatgccg
gttcccaaaaaaatgagaactgtgcaaagagttggaccagaggaggaagtaactgcggaa
gagagtacagatggagaaatagaagctcaagcctacaatcaggattcacaggattccatt
ggtgaaggtgttacacagggtgaatatactcccatggaagacagcgaggaaacgtctcaa
tccatcccaatagaacttggatctcttcagtcagatcaacaaaatactacatcatcccag
gatggtcaaggcaagagagatgatgtcattgtcattgacagcgatgatgaagaggaagat
gatgatgaaaatgatggagaagcagaagaatatgaagatgaggaagatgatgatgaagat
gaggatgatgaagacacagggatgggtgatgagggtgaagatagcaatgaaggcactggg
agcgttgatggtaatgagagatatgaaggagatgaagctgaaggtcctgatggtgtagat
cccagtacagaaaccgaagacagtattgctggaggtgaaagcagccagagagcagctgac
tctcaaaactgtggtgaaggaaatactggtgcagctgagtccactttctctcacgaaagc
ccacgagagcagcagcccacctctgcttcagagagacaagtgccacgtcctcctcggccc
catcccttgcccccgcgactgactattcatgctgttcctgctccaccacaggagctggga
ccaccagtacagaggatccagatgactcgaaggcagtcagtgggacgtggacttcagcta
acccctggtataggtggcatgcagcagcacttttttgatgatgaggacagaacggttcca
agcacaccaaccctagtggtaccacatcgtacagatggatttgcagaagcaattcattcc
cctcaagttgctggagttcccaggttcaggtttggacctcctgaggatatgccacagacc
tctggtcagtctgatcttggccagcttgcttcacaaggagggttagggatgtatgaaaca
cctcttttccttgcccatgaagaggaatcaggaggccgtagtgtcccaacaactccgctg
caggttgcagcacctgtgtcggtatttactgaaagcagcacagctgatgcatcagaacat
gcttcccagtctgtcccaatggttacaacatccactggaaacttatcaactacttcagaa
tctggaacaggggatgatggtgatgaggtttttgtggaggcagaatcagaaggaattact
tcagaggttggcctagaaattgatagccaacaggaagaagaatcatctcaaactcctgat
gagtcagaccttccttccaccagtcaagaccctccttctagttcatctgcagacacaagt
agtaatcatcccaagcctttccgtcgggttagacttcagccaccaacattaagaactgga
gttcgtggtcgtcagtttaacagacagaggggtgtaactcatgcgatgggtggcagagga
ggcctaaacagaggcaatattaactaa
DBGET
integrated database retrieval system