Sceloporus undulatus (fence lizard): 121930438
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Entry
121930438 CDS
T07740
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03030
DNA replication
sund03410
Base excision repair
sund03420
Nucleotide excision repair
sund03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121930438 (RFC1)
03410 Base excision repair
121930438 (RFC1)
03420 Nucleotide excision repair
121930438 (RFC1)
03430 Mismatch repair
121930438 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sund03032
]
121930438 (RFC1)
03400 DNA repair and recombination proteins [BR:
sund03400
]
121930438 (RFC1)
DNA replication proteins [BR:
sund03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121930438 (RFC1)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121930438 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
PTCB-BRCT
AAA_22
AAA_14
BRCT_2
AAA_5
RuvB_N
AAA_30
Rad17
Zeta_toxin
AAA_18
AAA_16
RNA_helicase
AAA_33
AAA_17
nSTAND3
AAA_19
NPHP3_N
AAA_7
Motif
Other DBs
NCBI-GeneID:
121930438
NCBI-ProteinID:
XP_042322672
LinkDB
All DBs
Position
5:complement(116896961..116941822)
Genome browser
AA seq
1156 aa
AA seq
DB search
MAAISGDSDYKQDIRKFFGVLTPGKKNEGNTAEKNVKHKKKEGTSGEKSKLKEIKEKNSS
LEDDFKQKQVNKKKRIIYDSDSEEEVQSAKKAKNPPDQETVFKPGQILKQDPVVYVSETD
EDDDFVNKAASQKPKNGTSTRALGTTGTSKTDPKAKVKSKPLSPVKLTPTSVIDYFGTGS
IQRSEKKLVSSKRKEPSQSRDSTLDDETIAKQLQLEENTEVERQLHEDEEFARTLAMLDE
IPKKKKPRKDTEEKQTVSTTKTSPDETQKNKQVHKVKHTISTLESRPSSTMEQIHLDSTR
TLTLHPESSVSKERNDLETKMLASKTSSKLSALKQKAESIKIENGTRKGESTSKESMIPK
GKTISPKEEKTPRKVSPQKSKSVSPEDSEKKQANYQAYRSFLNREGPKALGSKEIPQGAE
NCLESMSFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVKGRDCGLSKCEKATA
LGTKIIDEDGLFDLIRKMPGKKSKYEIAAEAEAKKTKSTSERSPLKGGAVKGKISPKKRE
SEPKKKVSTSAQDTFKFIKKESLDARRGLDFEEKKQVPKANGAPVWETSKSGTELLLWVD
KYRPTSLKTIIGQQGDQSCANKLLRWLRNWHKNTSENKHAKSSKFGNKDDGASFKAALLS
GPPGVGKTTTASLVCEELGLSYVELNASDTRSKNSMKEVVAESLNNTSIKDFCSGASSSC
STKHVLIMDEVDGMAGNEDRGGIQELIDLIKHTKIPIICMCNDRNHPKIRSLVYYCFDLR
FYRPRVEQIKGAMMSIAYKEGLKIPPPAMNEIILAANQDIRQVLHNLSMWSARNKTLTYD
GVKEDANKAKKDIKLGPFDVVRKVFATGEEASHMSLIDKADLFFHDYSLGPLFVQENYIH
VQPAAAGNDMKKHLMLLSKAADSICDGDLVDRQIRSQQTWNLLPTQAIYSSVLPGELMRG
YMNQFPNFPSWLGKFSSTGKHDRIIKELSMHMSLRTHASKRAVNLEYLSYLRDAIVRPLS
CLGTEGVQDAIAVMDSYCLMKEDVENIMEVTSWGGKPSEFSNLDSKVKSAFTRTYNKEAH
LTPYSLQMVQKTKRRAGSAVDAELNEELEADEVQSENEQETIENDAMIKKKVKTTKQPTV
EKREEKKKGKAKKKSK
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggcagccatttctggggacagcgattataagcaggatatccggaaattctttggagtt
ttaactcctgggaagaaaaatgaaggcaacactgctgagaaaaatgtgaaacacaaaaag
aaggaggggacctcaggcgagaagtcaaaattgaaggaaattaaggagaagaattcatcc
cttgaagatgatttcaaacaaaaacaggtgaacaagaaaaagaggataatctatgattca
gattctgaagaggaggtacagtcagcaaaaaaagctaagaatccaccagaccaggaaaca
gtcttcaaacctggacagattctaaagcaggatcctgttgtttatgtttcagagacagat
gaagatgatgattttgtaaataaagcagcttcccagaagcccaagaatgggacatctacc
cgtgctctcggaacaacaggaacatcgaagacagatcccaaagcaaaagtaaaaagtaaa
cccttatctccagtgaaattgacacctacctctgtaattgactactttggaactggtagt
atacagcgatcagagaagaagctggtatcaagcaaacgaaaagaaccttcacaaagcagg
gattctacactcgatgatgagactattgctaagcaactacaacttgaagaaaatacagag
gtggagagacagttgcatgaagatgaagaatttgccagaactctggctatgttggatgaa
ataccaaaaaagaaaaagcctcgaaaagatacagaagagaaacagacggtatcaacaacc
aaaactagtccagatgaaacacaaaaaaataaacaagttcacaaagtgaaacataccatt
tcaactcttgaatcaagaccttcttctacaatggaacagattcacttggatagcaccaga
acattgactcttcatccagaatcctctgttagtaaagagagaaatgatttggagaccaag
atgttggcctcaaagacaagctcaaagttatcagcactgaagcaaaaagcagagagtatt
aaaatagaaaatgggactcgaaaaggagaaagtactagtaaagaaagcatgattccaaaa
ggaaagacaatttcaccaaaagaagagaaaacacctagaaaggtttctccccagaaatct
aagtctgttagccctgaagactctgaaaagaagcaagccaactatcaggcttacagaagc
tttcttaatcgggaaggtccaaaagcacttggctctaaagagataccacaaggtgctgaa
aattgtttggaaagtatgtcatttgtgatcacgggtgtcttggaatctattgaacgtgat
gaagccaaatcactaatcgagcgttatggggggaaagtaactggtaatgtcagcaagaag
acaaactatcttgttaagggccgtgactgtggattgtcaaagtgtgagaaggcaacagct
ttagggacaaaaattattgatgaagacggtttatttgatttaataaggaagatgccaggc
aagaaatcaaagtatgaaatagcagctgaagcagaggcaaagaaaacaaaatccaccagc
gagagaagcccactgaaaggtggtgcagtaaaaggaaaaattagcccaaagaaaagggag
agtgaaccaaaaaagaaagtctccacttctgcacaggataccttcaaattcattaagaag
gaaagtctggacgcaaggaggggcctggactttgaggagaaaaagcaagttccaaaagct
aatggggccccagtttgggaaacaagtaaaagtgggacagaattattactttgggtggac
aaatacaggcccacgtctcttaaaacgatcattggacaacagggagaccagagctgtgct
aataaactcttacgttggcttcgaaactggcacaagaatacatcagaaaacaaacatgca
aaatccagtaagtttggaaacaaagatgatggggctagtttcaaagcagctttactctca
gggcccccaggggttggtaaaactactacagcttctctggtttgtgaggaattgggtttg
agctacgtggaattaaatgcaagtgatacacgcagtaagaacagcatgaaggaagtggtt
gccgaatccttaaataacaccagcattaaagatttttgttcaggagcatcatcttcatgc
agtacgaaacatgtcctaatcatggatgaggtggatggaatggctggcaatgaagacaga
ggaggaatacaggaattgattgacctgattaagcacacaaagattcctattatttgtatg
tgtaatgatcggaatcatccaaagatccgttccctcgtctactactgttttgaccttcgc
ttctatagaccacgtgtagaacagattaagggtgcaatgatgtctattgcctataaagaa
gggttaaagattccaccaccagcgatgaatgaaataatcttagcagctaatcaggatatt
agacaagtactacataatctcagcatgtggtctgcaagaaacaaaactctgacttatgat
ggtgttaaagaggatgccaacaaagctaaaaaggatattaaactgggtccttttgatgtt
gtcaggaaggtttttgctactggagaggaggcttctcacatgtcccttattgacaaagca
gacctgttcttccatgattattctctgggcccactctttgtccaagagaactatattcat
gttcaaccagctgctgctgggaatgatatgaaaaaacacctgatgttacttagcaaagca
gctgacagcatatgtgatggtgacttagttgacaggcagattcgaagtcaacaaacttgg
aaccttctacctacacaggctatttattcaagtgtcctccctggggagctaatgagaggt
tacatgaaccaattcccaaactttccaagctggttggggaaattttcatcaacaggaaaa
catgaccgtatcattaaagagttgtcaatgcacatgagcctcaggacacatgcaagcaag
agagcagtaaatctggaatatttatcatatctgcgagatgcaattgtgagacctttgtct
tgcttgggaacagaaggagtgcaagatgctatagcagtcatggattcctattgcttgatg
aaggaagatgttgaaaatataatggaagtgaccagctggggaggcaagcctagtgagttc
tctaacctagattccaaggttaaatcagctttcacacgaacctataacaaagaggcacac
ctaacaccgtattcactgcaaatggtacagaagacgaagcgacgagcaggttctgcagtg
gatgcagaattgaacgaagagctggaagctgatgaagtccagtccgagaatgaacaagag
acgattgaaaatgatgcaatgattaagaagaaggtgaagactaccaagcaaccaacagta
gaaaaaagagaggaaaagaaaaaggggaaagcaaagaaaaagagcaaatga
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integrated database retrieval system
