Sceloporus undulatus (fence lizard): 121930658
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Entry
121930658 CDS
T07740
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121930658 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121930658 (NUP54)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121930658 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
121930658
NCBI-ProteinID:
XP_042323223
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Position
5:183517832..183535546
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AA seq
559 aa
AA seq
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MAFNFGAAAAAGAAAAPNPAGFGGLETANSTATGFNFGGFGLTANPAVNFNIGNFGVSTT
STPPFNFGNSLASAGAFGGFGTTNTTAGSTFSFSAPTNTGTTGIFGATQNKGFGFGTGFG
TATGTGTGLGTGLGTGLGFGGFSTQQQQPTLGGLFSQPVQAPTQSNQLINTASALSAPTL
LGDERDAILAKWNQLQAFWGTGKGYFNSNIAPVEFTQENPFCRFKAVGYSCMPNNKDEDG
LVALVFNKKEAEIRSQQQQLVESLHKLLGSNQTLTVNVEGVKTMPDDLTEVIIYVVERSP
NGTSRRVPATTLYAHFEQANIKSQLQQQLGVTLTMARTELSPTQVKQFLQHPPAGVDPII
WEQAKVDNPDPEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQTTT
MAKIAQYKRKLMDLSHRALQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPTQFK
GRLNELMSQIRMQNHFGAVRSEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDLEDI
KLIEHGLNESIPIRGGVFS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaacttcggggctgccgctgctgccggggctgcagccgccccgaaccccgcg
ggatttggtgggcttgaaacagcaaactccactgccactgggtttaattttgggggtttc
ggattaactgctaatcctgcagtgaattttaatattgggaattttggtgtgtctactacc
tcgacgccaccattcaattttggtaacagtctggccagcgcaggggcctttggagggttt
gggacgacaaacaccacagctggatctacgtttagcttctcagctcctaccaacacaggt
accactgggatatttggtgctacccaaaacaaaggttttggatttggtactggctttggg
acagcaactggaactggtactggccttggcacaggtttggggacaggtttgggatttggt
ggtttcagcacccagcagcagcaaccaacccttggaggcctcttcagtcaacctgttcag
gctcctacccaatccaaccagctaataaacacagcaagtgccctttctgcacccacactc
ttgggagatgagcgagatgctattttggccaaatggaaccagctgcaggcattttgggga
acaggcaaaggatatttcaacagtaacattgccccagtggagttcacacaggaaaatcca
ttctgcagatttaaggctgtgggctacagctgtatgccaaacaacaaggatgaagacggc
ttggtagcactggttttcaacaaaaaggaagcagagattcgaagtcagcagcagcagctt
gtggaatcattgcacaaactcttaggttcaaaccagactctcactgtaaatgttgaaggt
gtaaaaacaatgccagatgatctgactgaagtaatcatctatgtggttgagaggtcgcca
aatgggacttcaaggcgagttccagccaccaccctttatgcacactttgagcaagcgaac
ataaaaagtcagctgcagcagcagcttggagttaccctaaccatggctagaacagaactc
tcacccacacaggtcaagcagttcctacaacatcctcctgcaggcgttgatcctatcatt
tgggaacaggccaaagtggataatccagaccctgaaaaactgattccagtgccaatggtt
ggcttcaaagaactcttgaggagactgaaggtccaagaccaaatgacaaagcagcatcag
actagattagatataatatcagaagacataagtgagcttcaaaaaaatcagactaccaca
atggccaaaatagctcaatacaaaaggaaacttatggacctttctcacagagcattgcag
gttttaatcaagcaagagattcagaggaaaagcggctatgccatccaagctgatgaagaa
cagcttcgcgtacagttggatacaattcagtgtgaactcaatgcgcctacgcagttcaag
ggtcgtctgaatgagctgatgtctcagattaggatgcagaatcactttggagctgtgaga
tcggaagagaggtactacattgatgctgacctcttgcgtgaaatcaagcagcatttgaag
cagcaacaagaaggtttgagtcacctgatcagcattataaaagatgacctggaagatata
aagctgatagagcatggattaaatgaaagcatccctatcagaggaggtgtcttcagctga
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