KEGG   Sceloporus undulatus (fence lizard): 121930658
Entry
121930658         CDS       T07740                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
sund  Sceloporus undulatus (fence lizard)
Pathway
sund03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sund00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121930658 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sund03019]
    121930658 (NUP54)
Messenger RNA biogenesis [BR:sund03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     121930658 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C
Other DBs
NCBI-GeneID: 121930658
NCBI-ProteinID: XP_042323223
LinkDB
Position
5:183517832..183535546
AA seq 559 aa
MAFNFGAAAAAGAAAAPNPAGFGGLETANSTATGFNFGGFGLTANPAVNFNIGNFGVSTT
STPPFNFGNSLASAGAFGGFGTTNTTAGSTFSFSAPTNTGTTGIFGATQNKGFGFGTGFG
TATGTGTGLGTGLGTGLGFGGFSTQQQQPTLGGLFSQPVQAPTQSNQLINTASALSAPTL
LGDERDAILAKWNQLQAFWGTGKGYFNSNIAPVEFTQENPFCRFKAVGYSCMPNNKDEDG
LVALVFNKKEAEIRSQQQQLVESLHKLLGSNQTLTVNVEGVKTMPDDLTEVIIYVVERSP
NGTSRRVPATTLYAHFEQANIKSQLQQQLGVTLTMARTELSPTQVKQFLQHPPAGVDPII
WEQAKVDNPDPEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQTTT
MAKIAQYKRKLMDLSHRALQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPTQFK
GRLNELMSQIRMQNHFGAVRSEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDLEDI
KLIEHGLNESIPIRGGVFS
NT seq 1680 nt   +upstreamnt  +downstreamnt
atggctttcaacttcggggctgccgctgctgccggggctgcagccgccccgaaccccgcg
ggatttggtgggcttgaaacagcaaactccactgccactgggtttaattttgggggtttc
ggattaactgctaatcctgcagtgaattttaatattgggaattttggtgtgtctactacc
tcgacgccaccattcaattttggtaacagtctggccagcgcaggggcctttggagggttt
gggacgacaaacaccacagctggatctacgtttagcttctcagctcctaccaacacaggt
accactgggatatttggtgctacccaaaacaaaggttttggatttggtactggctttggg
acagcaactggaactggtactggccttggcacaggtttggggacaggtttgggatttggt
ggtttcagcacccagcagcagcaaccaacccttggaggcctcttcagtcaacctgttcag
gctcctacccaatccaaccagctaataaacacagcaagtgccctttctgcacccacactc
ttgggagatgagcgagatgctattttggccaaatggaaccagctgcaggcattttgggga
acaggcaaaggatatttcaacagtaacattgccccagtggagttcacacaggaaaatcca
ttctgcagatttaaggctgtgggctacagctgtatgccaaacaacaaggatgaagacggc
ttggtagcactggttttcaacaaaaaggaagcagagattcgaagtcagcagcagcagctt
gtggaatcattgcacaaactcttaggttcaaaccagactctcactgtaaatgttgaaggt
gtaaaaacaatgccagatgatctgactgaagtaatcatctatgtggttgagaggtcgcca
aatgggacttcaaggcgagttccagccaccaccctttatgcacactttgagcaagcgaac
ataaaaagtcagctgcagcagcagcttggagttaccctaaccatggctagaacagaactc
tcacccacacaggtcaagcagttcctacaacatcctcctgcaggcgttgatcctatcatt
tgggaacaggccaaagtggataatccagaccctgaaaaactgattccagtgccaatggtt
ggcttcaaagaactcttgaggagactgaaggtccaagaccaaatgacaaagcagcatcag
actagattagatataatatcagaagacataagtgagcttcaaaaaaatcagactaccaca
atggccaaaatagctcaatacaaaaggaaacttatggacctttctcacagagcattgcag
gttttaatcaagcaagagattcagaggaaaagcggctatgccatccaagctgatgaagaa
cagcttcgcgtacagttggatacaattcagtgtgaactcaatgcgcctacgcagttcaag
ggtcgtctgaatgagctgatgtctcagattaggatgcagaatcactttggagctgtgaga
tcggaagagaggtactacattgatgctgacctcttgcgtgaaatcaagcagcatttgaag
cagcaacaagaaggtttgagtcacctgatcagcattataaaagatgacctggaagatata
aagctgatagagcatggattaaatgaaagcatccctatcagaggaggtgtcttcagctga

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