Sceloporus undulatus (fence lizard): 121930743
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Entry
121930743 CDS
T07740
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04110
Cell cycle
sund04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121930743 (SMC1B)
04114 Oocyte meiosis
121930743 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sund03036
]
121930743 (SMC1B)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121930743 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
121930743 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
AAA_23
Phage_lysis
Cwp8_D3
Motif
Other DBs
NCBI-GeneID:
121930743
NCBI-ProteinID:
XP_042323437
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All DBs
Position
5:104600657..104656423
Genome browser
AA seq
1233 aa
AA seq
DB search
MGYLKLLVVENFKSWRGKQRIGPFKKFTCVIGPNGSGKSNVMDALSFVMGEKISNLRVKH
IQELIYGAHVGKPVSSTGSVRMVYSEANGEEKTFSRTIRGNGSEFRINDSVVSRSVYTKE
LGEIGIITRARNCLVFQGEVETIAMKKPKERTQLFEQISNSGELAAEYAENKKKMQRAEE
DAQFSYNKKKNVAAERKRAKLEKEEAERYQMLFEELKEKKSQLQLFQLYHNKRKIDVLNN
KLSAKNKNIDAKKKDVCHAEDTVKAKKKDLGMLNRNNQYIEKEIKPLEVMLKQKRPQYIK
AKERTTYQIKKVDIAKKVLGNHMKEQAKQEDNKNELQDELNDIDRAQKMFEEKIAEERLH
GMRDVLLEENQINKYKELKELVRKRVAILTQQLEKLQWEQKADREKISFDQRRQKETEEN
IKQIREQIEDHEKRIEMLMEYSRTCTESLAEKKQEEEVLTNQIESSKRRIVEVNEELNKI
VSDLHNAKIDVHEGKRQQMKAETLESLKRLYPDYVFGRLVDLCHPIHKKYQLAVTKVFGK
YMTAIVVFSEKVARDCIRFLKAERAEPETFLPLDYLEVEPINEQLREIKGSKMMIDVIQT
SFPPLKKIIQFVCGNGLVCETIKEARQLAFDGPHRLKTVALDGTLFLKSGIISGGSSSLK
KKARYWDEKEVNELKDQREKLMNELKDLLKIRRKETDLKYLQAQCQGIQTRHKYSQNELD
VLRKKHLANFCKEKSMLESEVVNIQSQCSMLNEGVLQRTAKIDELQKKINEVEDNIFREF
CEEIGVEHIRVYEKEHIQLQEEIDKKRFEFENQKTRLNIQLEYICSFLEKEMKKNRVLEE
NIRKDEADIIHLKKDEENCLQMVDKIMAELQQLRRRQDDNKNEVAAAQSQVEESRKILLT
LNRELATLQKEAIAIETSLEQKKLERHNRLLECKLQDLRINLLLGSFDDISEIELGPDTE
SSERTADIYEREHLIQIDYSNLADELKDLESNKEIETQLEQLHQEIASKEDVLLKTAAPN
MKALERLHIVSDRFQESVDAFEARRREARLCRQEFEKVKKRRYELFSQCFEHVSVAIDQT
YKKLCRNNSAQAFLSPENPEEPYLEGIGFNCVAPGKRFMPMDNLSGGEKSLAALALVFAI
HSFRPAPFFILDEVDAALDNTNIGKVSDFIRQHSQEQFQIIVISLKEEFYSKADALIGVC
PQQDDIMFSQVLTLDLTKYPDPENERRQKRKKK
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgggatacttgaagcttttggttgtggagaatttcaaatcgtggcgagggaagcaacgc
attgggccattcaagaaattcacttgcgtcattggtcccaatggttcagggaaatcaaat
gtaatggatgcccttagttttgtaatgggtgagaagatatctaatttaagagtgaaacac
attcaagagctgatctatggggcacatgttggaaaacctgtttcatcgactggaagtgta
agaatggtgtatagcgaggcgaatggggaagagaaaacattttcaagaactattcgaggc
aatggatcagaatttcgtatcaatgactctgtggtcagccgatctgtgtatacaaaagaa
cttggagaaattggcataattactagagcaaggaattgcctggtttttcagggtgaagtt
gaaacaattgcaatgaagaaaccaaaggagagaactcagctctttgagcaaattagtaat
tcaggggagcttgctgctgaatatgcagaaaataagaagaaaatgcaacgagcagaggaa
gatgcacagttcagttacaacaagaaaaaaaatgttgcagctgagcgcaaacgtgcaaaa
ttagagaaagaagaggcagaacgttaccagatgctctttgaagagttgaaagaaaagaag
agtcagctgcagctttttcagctatatcacaataaacgaaaaattgacgtccttaataat
aaattgtcagcaaaaaataaaaatattgatgctaagaaaaaggatgtgtgtcatgctgaa
gatacagtgaaagctaagaaaaaggaccttgggatgttaaatagaaacaatcaatatatt
gaaaaagaaataaagcctctggaagttatgttgaagcaaaagagacctcagtatattaaa
gcaaaggaaagaaccacttaccaaattaaaaaagtagatattgctaagaaagtactagga
aatcatatgaaagagcaagctaaacaagaagataacaagaatgaactgcaggatgaacta
aatgacattgatagagcacagaaaatgtttgaagaaaagattgcagaggagagactccat
ggaatgagagatgttttgctggaagagaatcagataaataaatataaggagttgaaggaa
ctggtaagaaaaagagtagctatattgactcaacaactggaaaaattgcaatgggagcaa
aaggcagatcgagaaaagatatcatttgatcagcggagacaaaaagaaactgaggaaaat
ataaaacaaattagggaacagatagaagatcacgaaaaacggatagagatgctgatggaa
tacagtaggacgtgcactgaatcattagcagaaaaaaaacaggaagaagaagtgctgaca
aatcaaatagaaagttcaaaaagacggattgtcgaagtaaatgaagaactgaataaaatt
gtcagtgacttgcacaatgctaaaatcgatgtccatgaagggaaacgtcagcaaatgaaa
gcagaaaccttggagagcctcaaacgactgtatcctgattatgtgtttggaagactggtt
gatttgtgtcatcctatccataaaaaatatcaacttgctgtcactaaagtatttggcaag
tatatgactgccattgttgtattttcggaaaaagtagctagagattgcatccgtttcctc
aaggcagaaagagctgagcctgaaacattccttcctttggactatcttgaggtagaacca
atcaatgaacagttaagagaaataaaaggatctaaaatgatgattgatgtcatacagacc
tcttttcctccactgaagaaaattattcagtttgtttgtgggaatggtctagtctgtgaa
acaataaaagaagcaaggcagttagcatttgatggtccacatcgccttaaaacagtggct
cttgatggaactttatttttgaaatctggaataatctctggaggctcgagttctttgaaa
aagaaagccagatactgggatgaaaaagaggtgaatgaacttaaagaccagagagagaaa
ctgatgaatgaattaaaggacttactgaaaattagaaggaaggaaaccgatttaaagtat
ctgcaggctcaatgccaaggaattcaaacacgacacaaatattcacaaaatgaactagac
gttcttagaaaaaaacatcttgctaatttctgtaaggaaaaatctatgctggaaagtgaa
gtggtaaatattcaatcacagtgttccatgctgaatgaaggagtgttacaaagaactgcc
aaaatcgatgagctccagaagaaaattaatgaggtggaagacaatattttccgtgaattc
tgtgaagagattggtgtagagcatattcgtgtatatgaaaaagagcacatacaactgcag
gaggaaattgacaagaagagatttgaatttgaaaaccagaaaacacgactgaatattcag
cttgaatatatttgcagcttcttagaaaaggagatgaagaagaacagagtgctagaggag
aatattcgcaaagatgaagctgatatcattcacctgaaaaaggatgaggagaattgtcta
caaatggtagataaaattatggcagaactccagcaacttaggagaagacaggatgataat
aaaaatgaagttgcagcagcacagagtcaagttgaggaatcaaggaagatattactaact
ctaaatagagagttggcaactctacaaaaggaagctatagcaattgagacctcgctggaa
cagaaaaaattagaaaggcataataggcttcttgaatgcaagcttcaagacttaaggata
aaccttcttttgggatcttttgatgacattagtgaaattgagttaggacctgatactgaa
agtagtgaaaggacagctgatatctatgaaagagagcacttaattcagatagactatagc
aaccttgcagacgagttaaaggacttggagtcgaataaagagattgagactcaactagaa
caacttcatcaggaaatagcatctaaagaagatgttttattaaaaacagctgcaccaaat
atgaaagcactagagagattacatattgttagcgatagatttcaagaatcagttgacgca
tttgaagctcgtagaagggaagccagattatgtaggcaagaatttgagaaagtgaaaaaa
aggaggtacgagctgttcagccagtgttttgagcatgtgtcagtagctattgatcagacc
tacaagaaactctgcagaaacaatagtgctcaggcttttcttagtcctgagaatcccgag
gaaccttacttggaaggtattggttttaactgtgtcgctccagggaaacgatttatgcca
atggacaatctgtcaggtggtgaaaaatctttagcagctttggctcttgtgtttgcaata
cacagttttaggcctgctccctttttcattttggatgaagttgatgcagcactagataac
acaaacattggcaaagtatcagacttcattaggcaacactctcaagagcagttccagatc
atagttatctctctaaaggaagagttttattctaaagcagatgctctaattggagtctgt
cctcagcaagatgatattatgtttagtcaagttctgaccctggatcttacaaagtaccca
gatcctgagaatgaaagacgacagaaacgcaaaaagaaataa
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