Sceloporus undulatus (fence lizard): 121931014
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Entry
121931014 CDS
T07740
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04510
Focal adhesion
sund04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121931014 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121931014 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
ATG17_like
LAMB1
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
121931014
NCBI-ProteinID:
XP_042324082
LinkDB
All DBs
Position
5:82238684..82303334
Genome browser
AA seq
1756 aa
AA seq
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MDVLKELLPSHRDYLRPHDKLHVTSTCGLQKPEPYCILSHLQEDKKCFTCDSRDPFHETL
NPDSHRIENVVTTFAPNRLKLWWQSETGVENVTIQLDLEAEFHFTHLIMTFKTFRPAAML
IERSSDFGKTWQVYRYFAYDCENSFPGVSIGPMKKVDDIICDSRYSDIEPSSEGEVIYRA
LDPAFRIEDPYSPRIQNMLKITNIRVKFIKLHTLGDNLLDSRMEIREKYYYAIYDMVVRG
NCFCYGHASECAPVHGNDEEVEGMVHGHCMCKHNTKGLNCEQCLDFYHDLPWRPAEGRNS
NACKKCNCNEHSTQCHFDVAVYMATGNTSGGVCEDCQHNTIGRNCEQCKPFYFQHPERDI
RDPHICEPCNCDPAGSQNDGVCDRYTDFSAGLIAGQCRCKLFVEGERCDFCKEGFYGLSS
DNPLGCQSCGCNPLGTLPGGNPCDSETGNCYCKRLVTGRHCDQCLYQHWGLSNDMDGCRP
CDCDQGGALNNNCSRESGQCQCRPHMIGRQCNEVEPGYFFISLDHYVYEAEEAIFGPGVS
IVERQSSQDRVPSWTGIGFVRVPEGAYLEFYIDNIPYSMEYDVLIRYEPQLPDLWEKAVI
TVFRPGQISASSRCGNTVPDDDDQEVSLSPGSRYVVLPRPICFEKGLNYTVRLELPQYSL
NTEVENPYTLIDSLVLMPYCKSLDLFTVGGRGDDVTTNSAWETFQRYRCLENSRSVVKTP
MTDVCKNIIFSISALLHETALACQCDPQGSVSSVCDPNGGHCQCRPNIVGRRCDRCAPGT
FGFGPSGCKLCECHVQASVNPFCHPETGQCHCFHGIYGRQCDRCLPGYWGFPSCQPCQCN
GHADDCDPYSGQCLNCRDYTTGHNCERCLGGYYGDPALGSGDHCRPCPCPDGPESGRQFA
SGCYQDRTTLQVACICETGYKGIRCGECASGFFGNPEDIGGICQPCQCNNNIDSTDPEAC
DKKTGLCLKCLYHTEGENCQLCKHGYYGRALQQDCRKCVCNYLGTVRGQCNSSEDCECEK
ETGQCQCLPNVIGQSCDHCAPNTWMLASGNGCEPCGCDEDRSFGSSCNEFTGQCQCMPGF
GGRTCNECQEFFWGDPGVDCQACDCDQRGIQTPQCNRTTGRCICKEGVEGVRCDKCTRGY
SGTFPDCTPCHQCFALWDIIISELTNRTQRFLERAQALKITGVSGPYQKTLNSVEENLNE
IKSIIAQNPAAEPLKNIGNLFEEAKKLTADVTEKLAEVEEKLSKVSTESNNTDIQLSALE
ADAKSLDSVLKELVEQLEFIKISDVRGALDSITKYFQKSLDAEKQANASALLPGSVVEQS
AEMRLEIESLINETEATFKAKQEEQSRLLDELAGKLQSLDLADVAEKTCGTAPGASCDDS
KCGGLNCRTEDGKMKCGGPDCDGLVTVAHNTWQKAMDFDRDILSALAEVEQLSKMVSEAK
QRADEAKQNAQEVLLKTNATKEQVDRSNEDLRNLIKQIREFLMKDSADLDSIEAVANEVL
NMEMPSTPEQLQTLANSIRDRVESLSDVETVLQQSAGDIARAKALLDEAKKASKSATDVK
VTADMVKEALEETEKAQTAAEKALKLADEDIQGTQDLLTSLESETTASEESLNNATLRIA
ELEKNVELLRQKAATNTEDIRVTEETIAAVNQTTTDVKKVLDNDVNDKYKTVENLIAKKT
EESADARKKAEALQNEAKILLDQANSKLQLLKELEDTYERNQRVLEDKARQVVQLEETVR
SLLQAISQKVAVYSTC
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgctgaaggagctgctacccagccaccgggactacttaaggccacatgataag
ctacatgtcacctccacatgtggcctccaaaagcctgaaccatactgcatcttgagccac
cttcaggaggacaaaaaatgtttcacatgtgattcaagagacccattccatgagactctc
aaccctgatagccatcgcattgaaaatgtggtcacaacatttgctccaaaccgcctcaag
ttgtggtggcagtcagaaactggagtagaaaatgtgaccatccaattggatctggaagct
gaattccatttcactcatctcattatgaccttcaagacatttcgcccagctgcaatgttg
atcgaaagatcctcagattttggaaagacttggcaagtatacagatattttgcctacgac
tgtgaaaattcatttccaggtgtctccattggacccatgaagaaagtagatgacattatt
tgtgattcccgatattctgatattgaaccttcctctgaaggagaggtaatttaccgtgct
ctggatccagcatttagaatagaggacccatatagcccaaggatccagaatatgttaaag
atcacaaatataagagtaaaatttatcaagctacatacgttgggagacaatcttcttgat
tcgagaatggaaatcagagaaaaatattattatgccatttatgacatggtggtccgtgga
aactgcttctgttatgggcatgccagtgaatgtgcaccagtgcatggaaatgatgaagaa
gtggaaggaatggttcatggtcactgcatgtgcaaacataacaccaaaggtttaaactgt
gaacaatgcttggacttctaccatgatttgccatggagacctgcagaaggacgcaacagc
aatgcatgcaaaaagtgcaactgcaatgaacattctacacagtgccattttgatgtggct
gtttatatggcaactggaaataccagtggtggagtgtgtgaagactgtcaacataacaca
atagggcgtaattgtgagcagtgtaaacccttctacttccagcatccagagagagatatc
cgggatccccacatttgtgaaccctgtaactgtgatccagctggctcccagaatgatgga
gtttgtgatcgctacactgacttctcagctggccttattgctgggcaatgccgctgtaaa
ttatttgtggaaggggaacgctgtgatttctgcaaagaagggttctacggattaagttca
gataatcctcttggctgtcaatcttgtggatgtaatcctttgggaacacttcctggaggg
aatccttgtgactctgagacaggaaactgctattgtaagcgtcttgttaccggaaggcac
tgtgatcagtgtctgtatcaacactgggggctgagcaatgatatggatggatgtcgacca
tgtgattgtgatcaaggaggagcactgaacaataactgctcaagagaatctggtcaatgc
cagtgcaggcctcatatgattggacgccaatgcaatgaagtggagcccggttattttttc
atttctttggatcattatgtttatgaggcagaggaagccatctttggccctggagtgagt
attgttgaacgtcagtcttctcaggatcgtgtaccttcatggactggaataggatttgtt
agagttcctgaaggagcttatttagaattctatattgataacattccctattcaatggaa
tatgatgttctgattcgctatgaaccacagttaccagatctctgggaaaaagctgttatt
actgtatttcgtccaggccagatttctgctagcagcagatgtggcaatacagtacctgat
gatgatgatcaagaggtatcattatctccaggttcaagatatgtggttcttccacgacca
atatgcttcgaaaaaggacttaattacactgtccgcttggaactgccacagtattcctta
aatacagaggtggagaatccatacacgctcattgattcacttgttctcatgccatattgc
aaatcattggacttattcacagttggaggccggggtgatgatgtgacaacgaacagtgcc
tgggaaacatttcaaagataccggtgtctggagaacagcagaagtgttgttaaaacacct
atgactgatgtttgcaagaatataatctttagcatttcagctctgttacacgagacagca
ttggcttgccaatgtgatccacaaggctcagtaagttctgtgtgtgatccgaatggaggc
cactgccagtgtcggccaaatattgttggaagaagatgtgacagatgtgctccaggcact
tttggatttggaccaagtggatgcaaactttgtgagtgtcatgtccaagcttctgttaat
cccttctgccatccggagactgggcagtgccactgtttccatgggatatatggccgtcag
tgtgacagatgcttgcctggttactggggatttccaagctgccagccctgccagtgcaat
ggccacgcagatgattgtgacccatacagtggacaatgtttgaattgccgtgattacaca
actggccacaactgtgagagatgccttgggggctattatggagatcctgccctgggatcc
ggagatcactgccgcccttgtccttgtcctgatggaccagaaagtggacgccagtttgct
agtggttgttatcaggaccgcactaccctccaggtggcgtgcatttgtgaaactggatat
aaagggatcagatgtggcgaatgtgcttctggtttctttggaaaccctgaagacattggt
gggatttgtcagccctgccaatgcaacaataacattgactcaactgatccagaggcttgt
gacaagaagacaggattgtgcctgaagtgcttgtatcacacagagggggaaaactgccaa
ctgtgtaaacatggctattatggacgggctcttcagcaggactgtagaaagtgtgtttgc
aattacctgggaactgttcgtggacagtgcaatagctctgaagactgtgagtgtgagaaa
gaaactggtcagtgccaatgcctacctaatgtaattggacagagctgtgaccattgtgcc
ccaaacacatggatgttggctagtgggaatggatgtgaaccgtgcggttgtgatgaggat
cgttcctttggctcatcttgtaatgagtttactgggcaatgccagtgcatgccaggattt
ggaggacgcacgtgtaatgaatgccaggagttcttttggggtgatcctggtgtggactgc
caagcttgcgactgtgatcagcgtggtattcagactccgcagtgcaatcgcacaactggc
cggtgcatctgtaaggagggtgtggaaggggtccgatgtgataagtgcacccgaggttat
tctggcaccttccccgactgtactccttgccatcagtgttttgctctctgggatatcatc
attagtgagctcactaaccggacacagagattcctggaaagagcacaagccctgaaaatc
acaggggtcagtgggccttaccagaagactctcaactctgtggaggaaaacctgaatgag
attaaaagcatcattgctcagaatcctgctgccgagccccttaagaacattggaaatctc
tttgaggaagctaagaaactaacagcagatgttactgaaaagctagcagaagttgaagaa
aaattgtccaaggtgtcaacagaaagcaataacacggacattcaactgagtgccctcgag
gcagatgcaaagagcctagacagtgtcctgaaagaactagtggaacaactggagttcata
aaaatttctgatgttcggggtgctttggatagcatcactaaatatttccaaaagtccttg
gatgcagaaaaacaagccaatgcctcagctcttcttcccggcagtgttgtagagcaatcg
gctgaaatgcgactagaaattgaaagcttgatcaatgaaacagaggcaaccttcaaggct
aagcaagaggagcagtcccggctcttggatgaacttgcaggcaaactccagagtctagat
cttgcggatgtggctgagaagacatgtggaactgcccctggggcttcctgtgatgattca
aaatgtggtggcctaaactgtcgaactgaagatgggaaaatgaaatgcggagggccagac
tgtgatggattggttacggtggcccacaatacctggcaaaaagctatggatttcgacagg
gacatcctcagtgctttggctgaggttgagcagctttcgaaaatggtctcagaagcaaaa
cagcgagccgatgaagcaaaacaaaatgcacaggaagttttgttaaaaacgaatgccacc
aaagaacaagtggacaggagcaatgaagatctgaggaatctgattaaacagatcagagaa
tttctgatgaaagacagcgctgacctggacagcattgaggcagtggctaatgaagtgctc
aatatggagatgcccagcacacccgagcagttacagacattggcaaacagtattcgtgat
cgagtggagagtctttctgatgttgagacagtcctacagcagagtgctggagatatagca
agggcaaaagcactgttagatgaagcaaaaaaggccagtaaaagtgcaacagatgttaaa
gtcaccgcagacatggtgaaagaggctctggaagaaactgaaaaagcccaaacagctgct
gaaaaagcactcaaactagcagatgaagatatccaaggaacacaagaccttcttacctct
cttgaatctgaaactaccgcatcagaagaatctttgaacaatgctactttgcgtattgct
gaactggaaaagaatgtggaattgctcagacaaaaggctgctacaaacacggaggacatt
agagtgactgaagaaaccattgctgctgtgaatcaaaccaccactgatgttaaaaaggta
ctagacaacgatgtgaacgacaaatataaaacagtagaaaacttaattgccaagaaaaca
gaagagtctgcggatgccaggaagaaagcagaagcattacagaatgaagctaaaatactg
ttagatcaagcaaacagcaaacttcagcttctgaaagaattagaagacacatatgagaga
aatcaaagagtcctagaagacaaagccagacaagtggtgcagctggaagagaccgttcgc
agcctcttgcaggccatcagccagaaagttgcagtttacagcacttgttaa
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