Sceloporus undulatus (fence lizard): 121931080
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Entry
121931080 CDS
T07740
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121931080 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121931080 (DCP1B)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121931080 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
121931080 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
121931080
NCBI-ProteinID:
XP_042324295
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Position
5:complement(7819708..7848916)
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AA seq
619 aa
AA seq
DB search
MAAAAAAAAAAGAAPAAVAGAAPLGKGLDISLAALQRQDPYISGIVDVASQVALYTFGHR
ANEWEKTDVEGTLFVYARTASPKYGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNAR
LSIYGIWFYDKEECQRIAELMKNLTQQEQLKAQQGTGMGISPVSLTSGDNKEVDILRMLT
KAKDEYTKCKACSEPKQITSSSAIYNNPNLIKPIPVKPSETQHQHNTDPEPQHLSLTTLF
GKQEKSSMYQDASDLSQKLLQDNFPPRQGVVRSLSYEEPGRHSPTTEKQLCPAIQKLMVH
GGAELHPVSELPENRLCENGSLHTGGKVFTGLFQPMASHGVCRTSHPVRNAASTQSLLQQ
LQGQSGQVTKMETSNSVPPCSAAPIFSRTAPPPSIAQVKSVTQPPVMYFNGSVPSQTLGS
PPVLGKEQSKLPGQSLPLSGNPSGNSGVISPQELLKKLQIVQQEQQLHVSSRPTLAAKFP
VVTQSTTSLKPLDSWMDKASNTEKQLPLFQVISPQRIPATIAPSLLMSPMVFSQSAPAPP
NPNESGWLPVVNQEAISSSGSLLLPLHNPEPPIGNSSPLTKLQLQETLLHLIQNDDNFLN
IIYDAYLLSVRKAVLKKPM
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctgcggctgctgctgctgcggctggagctgctccggcggcggttgcgggg
gccgctccgctggggaaggggctggacatcagcctggcggccctgcagcgccaggacccc
tacatcagcggcatcgtggacgtggccagccaggtggcgctctacaccttcgggcaccgc
gccaacgaatgggagaagactgatgtggaaggaacactgtttgtttacgcaagaacagct
tcaccgaagtatggattcaccattatgaacagactgagcatggaaaatcggacagaaccc
ataactaaggatctggacttccaactacaggaccctttccttctttacagaaatgccaga
ttgtccatttatggaatttggttttatgataaagaagaatgtcaaagaattgcagagctc
atgaaaaatttaactcagcaagaacaactgaaagcacagcaggggactggcatgggaatt
tcccctgttagcctgacttcaggtgacaacaaagaagtggatatcctacggatgctcact
aaagccaaagatgaatataccaagtgcaaggcatgttctgagcccaaacaaataaccagc
tcttctgctatatacaacaacccaaacttgatcaaaccaatcccagtgaagcctagtgaa
actcagcaccagcataacacagatcctgaaccacagcacttatccctaacaacactcttt
ggaaagcaggaaaaatctagcatgtaccaagatgcctccgacctgtcacagaagcttctg
caagataactttcctcccaggcagggagttgtccgctctttgtcctacgaggagcctggc
aggcattcgcccacaacagagaagcagctttgcccagccattcaaaaactcatggtgcat
ggcggggctgagcttcacccagtttctgaactccctgaaaatcgactgtgtgagaatggc
agcctccatactggaggcaaggtttttaccggactcttccagcccatggcttctcatggt
gtttgtaggacgtctcatccggtccgcaatgcagccagcactcagagcctgctgcagcaa
ctgcagggtcagtcaggacaggtaactaaaatggagaccagcaactcagtgccgccatgc
tcagctgcacccatcttcagcagaactgctcctcctccttcaatagcccaggtcaagagt
gtgacacagccacctgtgatgtatttcaatggctctgtcccaagccagactttggggtct
cctccagtccttggcaaagaacaatccaaacttcctgggcaatcccttcctctctctggg
aacccatctggcaactctggagtaatttcaccacaggagttgctaaagaaactccagatt
gttcagcaggagcaacagttacatgtctccagtcggccaaccttggcagctaagtttcct
gtagttactcagagcactacctctctgaaaccattggattcctggatggacaaagcttcg
aacacagaaaagcagctccctctttttcaggttatctcaccacagcggattcctgcaacc
atagctccatcactcctgatgtccccaatggtgtttagtcagtctgccccagctccacca
aatccaaatgaaagtggatggctgccagttgtgaaccaagaagctatttctagttcagga
agccttctcctgcctctgcataaccctgaaccccccattggaaacagcagtccactgaca
aagctgcagctgcaggaaacattactgcatctgatccagaatgatgacaacttcctaaac
atcatctacgacgcataccttctcagcgtgagaaaagcagtcctgaaaaagcctatgtaa
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