Sceloporus undulatus (fence lizard): 121931090
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Entry
121931090 CDS
T07740
Symbol
TNPO3
Name
(RefSeq) transportin-3 isoform X1
KO
K15436
transportin-3
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03013
Nucleocytoplasmic transport
sund03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121931090 (TNPO3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121931090 (TNPO3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sund03016
]
121931090 (TNPO3)
Transfer RNA biogenesis [BR:
sund03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
121931090 (TNPO3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
121931090
NCBI-ProteinID:
XP_042324329
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All DBs
Position
5:complement(3243318..3308166)
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AA seq
972 aa
AA seq
DB search
MDPGGGGGGGGGGACPGSGGGNGGGGGSGGGGAGKPSLQVVYQAVQALYHDPDPSGKERA
SLWLGELQRSVHAWEISDHLLQIRQDVESCYFAAQTMKMKIQTSFYELPTDSHVSLRDSL
LSHIQNLKDMSPVIVTQLALAIADLALQMASWKGCVHTLVEKYNNDVTSLPFLLEILTVL
PEEVHSRSLRIGANRRTEIIEDLAYYSSTVVSLLVTCVEKAGNDEKMLIKIFRCLGSWFN
LGVLDSTFMANSKLLSLLFEVLQQDKTSSNLHEAASDCVCSALYAIENVETNLPLALQLF
QGVLTLETAYHMAVAREDLDKVLNYCRIFTELCETFLDKIVCTPGQGLGDLRTIELLLIC
AGHPQYEVVEISFNFWYRLGEHLYKTDDAIIHSIFKAYIQRLLHALARHCQLDPDHEGIP
EETDDFGEFRMRVSDLVKDLIFLVGSVECFAQLYATLKEGNPPWEVTEAVLFIMASIAKS
VDQENNPTLVEVLDGVVRLPESVHMAVRYTSIELVGEMSEVVDRNPHFLDPVLGYLMKGL
CEKSLASVSAKAIHNICSVCRDHMAQHFTGLLEIARSLDSFMLSPEAAVGLLKGTALVLA
RLPLEKISACLSELCAVQVMALKKLLSQEPSNGLSSDPTVPLDRLAVIFRSPFPFSVSSH
RHTNPIVENGQTHPCQKVIQEIWPVLSETLNKHRADNRIVERCCRCLRFAVRCVGKGSAA
LLQPLVTQMVSVYQEHQHSCFLYLGSILVDEYGMEEGCRQGLLDMLQALCVPTFRLIEQP
NGLQNHPDTVDDLFRLATRFIQRSPITLLRSQVILPILQWAIAATTLDHRDANCSVMKFL
RDLVHTGVANDVSEGSSVEHEEDFEARKELIGQVMTQLGQQLVSQLLHTSCFCLPPYTLP
DVAEVLWEIMQIDRPTFCRWLENSLKGLPKETTGGAVQVTHKQLTDFHKQVTSAEECKQV
CWALRDFTRLFR
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggcgggggaggcggcggcggcggcggaggcgcctgtcccgggtccggcgga
ggcaatggaggcggcggcggcagcggtggaggcggcgctgggaagcccagcctgcaagtg
gtctaccaggccgtgcaggcgctctaccacgatccggaccccagcggcaaggagcgcgcc
agcctctggctcggggagctccagagatcggttcatgcatgggagatctcagaccatttg
ctgcagatccggcaggatgtggagtcgtgctactttgcagcccaaaccatgaagatgaaa
atccagacctcattctatgagctccccacagactcccatgtttccctgcgggactcgttg
ctttcccacatccagaacttgaaagacatgtcccccgtcatcgtcacccagcttgcatta
gccatagcagaccttgccctacagatggcctcttggaaaggctgcgtacacacactggtc
gaaaagtacaacaatgatgtgacgtcactgcccttcttactggaaatcctgacggtgctg
ccagaagaggttcacagccgatccttacgcattggagccaaccgccgcactgagatcatc
gaagacttagcctattactccagtacggtggtctctctgctggtgacctgtgtggagaag
gcaggcaatgatgagaagatgctcataaagatcttccgctgcctagggagctggttcaac
cttggcgtcctcgacagcaccttcatggccaacagcaaattgctatcactgctctttgaa
gttctgcaacaagacaagacatcgtcaaacctgcacgaagccgcttcagactgcgtctgt
tctgcgctttatgccattgagaacgtggaaaccaacttgcccctggccctgcagcttttc
cagggtgtcctgaccttggagacagcttatcatatggcggtggcccgcgaagatttggac
aaggttcttaattactgccggatctttaccgaactctgtgaaacatttctggataaaatc
gtttgcacaccaggccaaggcttgggcgacttgcgaacgatagagctcctcttgatctgc
gcaggccacccccaatatgaggtggtggaaatttccttcaacttctggtaccgactgggg
gagcacctttacaagacagatgacgccatcatccacagcattttcaaggcctacatccag
aggctccttcatgcccttgcacggcactgccagctggatccggaccatgaagggatccct
gaggagacagatgactttggggagttccggatgcgggtatcggatcttgtcaaggacttg
attttcttagttggctctgtggagtgttttgcccagctttacgctaccttgaaagaaggc
aaccctccctgggaagtgacggaagctgtcctcttcattatggcctcaattgccaagagt
gttgatcaggagaacaatccgacactcgtagaagtcctggacggagtggtacgccttcct
gaatcagtgcatatggctgtccgatacacaagtattgagctggttggcgaaatgagcgaa
gttgtggacaggaatccccactttcttgatcctgtgcttggctatttgatgaagggcctg
tgtgagaagtcgctggcctctgtctctgccaaagccatccacaacatttgctcagtgtgc
cgggatcacatggcccagcacttcactgggttgctggaaatcgctcggtccctggactcc
ttcatgctctcgccagaggcagctgtggggctccttaaagggactgcattggtgctggcc
aggcttcccctggagaagatctcagcatgtctcagtgaattgtgtgctgttcaggtgatg
gcgctgaagaagctgctctctcaggagccgagcaatggcctctcctccgaccctactgtt
cccctagatcgccttgctgttatattccggtccccttttcctttttctgtttcttctcac
aggcataccaaccctattgtagaaaatgggcagacccacccgtgccaaaaagtcatccag
gagatctggcctgtcctgtcagagaccctgaacaaacaccgtgccgataatcgtattgtg
gaacgctgctgccgatgcctgcgcttcgctgtccgctgcgttggcaaaggatcagcggcg
ctcttacagccgctggtcactcagatggtgagcgtctaccaggagcatcagcactcctgc
ttcctctatctgggcagcatccttgtagatgagtacggcatggaggaaggctgccgccag
ggcctacttgacatgctgcaggctctctgtgtccccaccttcaggctcattgagcaaccc
aacggcctccagaaccatccggacactgtggatgacctcttccggctggcaaccaggttc
attcagcgaagccccatcacgctgctccgcagccaggtaatccttcccatcctccagtgg
gccatcgctgccactacccttgaccaccgtgatgccaactgcagcgtcatgaagttcttg
cgtgatcttgtccacacaggagtggccaatgatgtgagtgagggatcttcagtagagcac
gaagaggactttgaggcacggaaggagcttattgggcaagtgatgacacagctgggccag
cagcttgtaagccagctcctgcacaccagctgcttctgcctgccgccttacactttgccg
gacgtggccgaggtgctatgggagatcatgcagattgacaggccgaccttctgccgttgg
ctggaaaattcactgaagggcttaccaaaggagactaccgggggagctgtgcaggtgacg
cacaagcagttgacggacttccacaagcaagtcacaagtgctgaggagtgcaaacaggtt
tgctgggctctgagagacttcaccagactgttccggtag
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