Sceloporus undulatus (fence lizard): 121931125
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Entry
121931125 CDS
T07740
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121931125 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sund03021
]
121931125 (SMARCA5)
03036 Chromosome and associated proteins [BR:
sund03036
]
121931125 (SMARCA5)
Transcription machinery [BR:
sund03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
121931125 (SMARCA5)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
121931125 (SMARCA5)
RSF complex
121931125 (SMARCA5)
WICH complex
121931125 (SMARCA5)
B-WICH complex
121931125 (SMARCA5)
NORC complex
121931125 (SMARCA5)
BRF complex
121931125 (SMARCA5)
NuRF complex (fruit fly)
121931125 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
121931125
NCBI-ProteinID:
XP_042324406
LinkDB
All DBs
Position
5:complement(148855966..148894871)
Genome browser
AA seq
1034 aa
AA seq
DB search
MMMMSSVGQESETGSALLSSAAAATESLGVAGGGGDADGAVMIDDESSGKQKENQEPDAT
YEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSVG
DYRHRRTEQEEDEELLTESSKTTNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGI
NGILADEMGLGKTLQTIALLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLRAVC
LIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSK
LSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNCLGDQK
LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAG
KLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQG
SRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSKFVFMLST
RAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVE
RAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKESEITDDDIDGILE
RGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKMAFTEWIEPPKRERK
ANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYK
VPRNPDLPNAAQAQKEEQIKIDEAEPLNEEELEEKEKLLTQGFTNWNKRDFNQFIKANEK
WGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKK
ALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRN
SPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSLVQKRKLD
GTPDGRGRKKKLKL
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgtcttctgtggggcaggagagcgagacagggagcgccctcctctcctct
gccgccgcagccacggagagcctgggggttgccggaggaggaggagacgccgacggagcg
gtaatgattgatgacgaatcttcaggaaaacagaaagagaaccaagaaccagatgcaaca
tatgaagaaaaaatgcaaacagatcgagcaaacagatttgagtatctgttgaagcagaca
gagttgtttgctcatttcattcagcctgctgctcagaagactccaacttcacccttaaaa
atgaaaccaggccgaccgcgaataaagaaagatgaaaaacaaaatctactatcagttggg
gactaccgccatcgtagaactgaacaggaggaagatgaagagctgttgacagaaagttca
aagaccactaacgtatgcactcgatttgaagattccccatcatatgtaaaatgggggaaa
ttacgtgattatcaagtccgaggactgaactggcttatttctttatacgaaaatggtatc
aatggtattttagcagatgaaatgggtttaggaaagacactgcaaacaattgctcttctt
ggatatatgaagcactacagaaatattcctggtcctcacatggtattagttcccaaatca
actttacataattggatgaatgaattcaaaagatgggtgccgactcttcgggcagtctgt
ctgataggtgacaaagaccagcgagctgcttttgttcgagatgtcttgttgccaggtgaa
tgggatgtctgtgtgacatcatatgaaatgctcatcaaagagaaatcagtgttcaaaaaa
ttcaactggagatacctagttattgatgaagctcacaggattaaaaatgaaaaatcaaag
ctgtcagagattgtgagggaattcaagaccacaaatagattgctgttaactggaactcca
ctgcagaacaatttacatgagctctgggcacttcttaacttcttattgccggatgtcttt
aactcagctgaggattttgattcatggttcgatacaaacaactgtcttggggatcaaaaa
ctagtggaacggcttcatatggtgttacggccatttctcttgcgtcgtattaaagctgat
gtagaaaagagtttgcctccaaagaaagaagttaaaatatatgtaggtctcagcaaaatg
cagagggaatggtacacaaggatcttaatgaaggacatagatatattgaattctgctgga
aaactggacaaaatgagactgctgaatattcttatgcaattacgaaaatgttgtaatcat
ccatacctttttgatggagcagagcctggtccaccttacaccacagatatgcatttggtt
actaacagtggcaaaatggtagttttggataaactgttgccaaagttaaaagaacaagga
tcaagagtcctaatcttcagtcagatgaccagagtccttgatattttagaagattactgc
atgtggagaaactatgaatactgtaggcttgatgggcaaacacctcatgatgagagacaa
gcttccattaatgcatataatgaacctggcagctcaaagtttgtttttatgctcagtaca
cgtgctggtggtctgggaattaacctggctacagctgatgttgtaattttgtatgattct
gactggaatccccaagtagatcttcaagctatggatcgagcacacagaattggccagaca
aaaactgttagagtattcagatttattacagacaacactgtagaagaaagaatagtggaa
agagcagaaatgaaacttcgtttggattccattgttattcagcaaggaagactggtggat
caaaatctaaataagctgggaaaagatgaaatgttgcagatgattcgacatggagctacc
catgtttttgcttcaaaggagagtgaaattacagatgatgatattgatggtattctggaa
agaggtgcaaagaaaacagcggaaatgaatgagaaactctccaagatgggtgaaagctca
ctaaggaacttcacaatggatacagagtctagtgtgtataactttgaaggagaggattat
agagagaaacaaaagatggcattcacagagtggattgagccacctaagcgtgagagaaaa
gcaaactacgctgttgatgcttatttcagggaagctcttcgtgtcagtgaaccaaaagca
ccaaaggctccacgacctccgaaacagcctaatgttcaggatttccagtttttcccacca
cgtttgtttgagttgttggaaaaagagattctatattatagaaaaacaattgggtacaag
gtacctcgtaatccagacctgccaaatgcagctcaggcacaaaaggaagagcaaattaaa
attgatgaagctgagccccttaatgaagaagaattagaagaaaaggaaaaattgctcact
cagggatttacaaactggaataaaagagatttcaatcagttcatcaaagcaaatgaaaaa
tggggtcgtgatgacattgaaaacatagctcgggaagtagaaggaaaaactccagaagaa
gtcattgaatattctgctgttttttgggagcgatgtaatgagctccaggatatagaaaaa
atcatggcacaaattgaaaggggtgaagctcggattcagaggaggattagtattaaaaag
gcattggatacaaagattggcagatacaaagcaccatttcaccaactgagaatatcatat
ggtactaacaaagggaagaattatacagaagaagaagatcgctttttgatctgtatgctt
cacaagctaggatttgataaggaaaatgtttatgacgagctgagacaatgtattcgcaac
tctccccaattcagatttgactggtttctcaagtctagaactgcaatggaactacagaga
agatgcaataccttaatcactttgattgaaagagaaaacatggaattagaagaaaaggag
aaagcagagaaaaagaaacgtggaccaaaaccatctttggtacagaaacgtaaactggat
ggcacccctgatggtagaggacggaaaaagaaattaaagctgtga
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integrated database retrieval system
