Sceloporus undulatus (fence lizard): 121931415
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Entry
121931415 CDS
T07740
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04010
MAPK signaling pathway
sund04210
Apoptosis
sund04218
Cellular senescence
sund04620
Toll-like receptor signaling pathway
sund04621
NOD-like receptor signaling pathway
sund04622
RIG-I-like receptor signaling pathway
sund04623
Cytosolic DNA-sensing pathway
sund04625
C-type lectin receptor signaling pathway
sund04920
Adipocytokine signaling pathway
sund05132
Salmonella infection
sund05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121931415 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121931415 (NFKB1)
04218 Cellular senescence
121931415 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121931415 (NFKB1)
04621 NOD-like receptor signaling pathway
121931415 (NFKB1)
04622 RIG-I-like receptor signaling pathway
121931415 (NFKB1)
04623 Cytosolic DNA-sensing pathway
121931415 (NFKB1)
04625 C-type lectin receptor signaling pathway
121931415 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
121931415 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121931415 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
121931415 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sund03000
]
121931415 (NFKB1)
Transcription factors [BR:
sund03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
121931415 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
121931415
NCBI-ProteinID:
XP_042325081
LinkDB
All DBs
Position
5:complement(169299915..169370257)
Genome browser
AA seq
986 aa
AA seq
DB search
MADESAYILGLDHQVFPMDPYPMGMNPLFNNSSMITSDLSLHAANGPYLQIVEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYTGPAKVIVQLVTNGKHVHLHAHSLVG
KHCEHGVCTVNAGPKDMAVGFPNLGILHVTKKRVLDTLETRMIDACKKGYNPGLLVHPDL
GYIQVEGGGERQLTEQEREIVHQAALQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLQPVL
SDPIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGVWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDSYGGSGAGAGGGGMYGGGGGGGGAGSGYGYSPYGFSGYGAMHF
HSNTNKTGAGMKHGLSNDMPKKDAESCCTKKHSVKFKEKSEIEEESKASIGTVPEVERST
LSCADTADAYLQGAFFLEKAMELAKRHANALFDYAVTGDVKMLLAVQCHLTSVQDENGDN
VLHLAIIHLHAELVRNLLEVIADLDSADVLNVRNDLYQTPLHLAVITKQARVVKDLLSTG
ADVTLLDRHGNSVLHLAVKQGDEKVLNILLNHKEASLIKDLPNGEGLAVIHLAVMANSVS
CLRRLFAADIDVNAQEQKSGKTALHLAVEQGNISLAGCLLLEGEAFVDSTTYDGTTPLHI
AAGRGSTKLAALLKAAGADPHIENFEPLFEQDDVKDKDGEDEGIIPGTTPLDMATSWEVY
DILNGKCSKSKVASDDVLIRGNMKELSDSVKSQLYKLLEVPDLNKNWSMLAQKLGLGILN
NAFRLSPSPSKTLLDNYEVTHNYEVSGGTVKELVDALREMDYPEPVGIIQKSLSVASSQS
SQEITKDARPSLSESPSSPIKSQTGELCNLKLQDTESICDSGVEISLRKLSFTHSESFTS
KSPVMLKKLATGYGQDNVLQSKIEAT
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgagagtgcatatatcttgggactagatcatcaagtgtttccaatggacccc
taccccatggggatgaatccactgttcaataattcaagcatgattacatctgatctatca
cttcacgcagctaatgggccataccttcaaattgttgaacagcctaagcagagggggttt
cgcttccgctacgtttgtgaaggaccatcacatggcggacttcctggagcttccagtgaa
aagaacaaaaaatcatatccacaggttaaaatctgcaattacactgggccagcaaaagta
atcgtgcagttagtcacaaatggaaaacacgtccaccttcatgctcacagtttggtgggg
aaacactgtgaacatggggtatgcacagttaatgcaggacccaaagacatggcggtgggg
tttccaaatcttggaatactacatgttacaaagaagagagtcttagacacgctggaaaca
cgcatgattgatgcctgtaaaaaagggtataatccaggactcctagtacacccagatctg
ggctatatacaagttgaaggtggaggggagagacagctaacagaacaagaacgggaaatt
gttcatcaggcagcacttcagcagacaaaagaaatggacctcagtgttgtgcggctaatg
ttcacagcatttctccctgacagcaccggcagttttacaagaaggcttcaacctgtcttg
tctgatcctatatatgatagcaaagctcccaatgcatctaacttaaaaattgtacgcatg
gatcgcacagcaggctgtgtgacaggaggagaagagatttaccttctttgtgacaaagtt
cagaaagatgatattcagatccgcttttacgaagaagatgaaaatggtggtgtctgggaa
gggtttggagacttttcacctactgatgtacatagacagtttgccattgtattcaaaaca
ccaaagtacagagatgtcaatattacaaaaccagcatctgtttttgtccagctacggcgg
aagtcagatctggagacaagcgaaccaaagccttttctatactatcctgaaatcaaagat
aaagaagaagtgcaaagaaaacgacagaagctcatgcctaacttctctgatagttatggc
ggtagtggtgcaggtgctggaggaggtggaatgtatggaggaggaggtggtggtggtggt
gctggatcaggatatgggtactcaccatatggtttttctggttatggagcaatgcacttc
cattccaacacaaacaagactggtgcaggaatgaaacatggtttatcaaatgacatgcct
aaaaaagatgccgaaagttgctgcaccaaaaaacacagtgtgaaattcaaagagaaatca
gagattgaagaggaaagcaaagcgagtataggcacagttccagaggtagaaaggtccact
ttatcatgtgctgatacagcagatgcttatctacaaggtgctttctttttggaaaaggca
atggagcttgccaagcgccatgccaatgccctctttgattatgcagtcactggagatgta
aagatgctgctggctgtacagtgtcaccttacttctgtccaggatgaaaatggtgataat
gtccttcacctagcaattattcatcttcatgcagaactagtgaggaatctcctagaagta
atagcggatcttgattctgctgacgttctcaatgtgagaaatgacctttaccagacccct
ttacacctggccgttatcacaaagcaggcaagagtagtaaaagacttactcagtactggg
gcagatgtgaccctcttggatcgccatggcaattcagtattacatctagcagtcaaacaa
ggggatgagaaggtgttaaacatcctgcttaaccacaaagaggcatctctgattaaagac
cttcctaatggagaaggcctagctgtcatccacttagctgtgatggcaaacagtgtgtct
tgtcttagacgactgtttgctgcagatattgatgtcaatgctcaggaacagaagtctggg
aaaactgcattgcatctggctgtcgaacaaggaaatatctccttggcaggttgccttctt
cttgagggggaggcatttgttgacagtactacctatgatggaaccactccacttcacata
gcagctggaagaggctctacaaaattggcagctcttctcaaagcagcaggtgcagatccc
cacattgagaactttgaaccactgtttgaacaagatgatgtgaaggacaaagatggggaa
gatgaagggattatccctggaacgacacctttggacatggcaaccagctgggaggtatat
gacatcttgaacggcaaatgctcaaagtcaaaggtggcttcagatgacgtattgattcga
ggaaacatgaaagagctgagcgacagtgttaaatcacagctttacaagttacttgaagtg
cctgatctgaacaaaaattggtccatgttagcacaaaagctgggtctagggatactaaac
aatgccttccggctgagtccttctccatcaaaaactctactggataattatgaggtaaca
cataattatgaggtttctggtggaacagtaaaagagcttgttgatgccttgagagaaatg
gattatccagagcctgttggaataattcagaaatcactgtctgttgcatcaagccagtcc
agccaagaaattacaaaagatgcgagaccttcattaagtgaatcaccttcatcacccata
aaatcacaaacaggtgaactttgcaatctcaaactccaagatactgaaagcatttgtgac
agcggggtagagatctccctccgcaaacttagctttacacattcggagtctttcaccagc
aagtcaccggtaatgcttaagaagctggccacaggatatggacaggataatgtgctgcaa
agcaaaattgaagccacttaa
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