Sceloporus undulatus (fence lizard): 121931506
Help
Entry
121931506 CDS
T07740
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
121931506 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sund01009
]
121931506 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sund04515
]
121931506 (PCDH7)
Protein phosphatases and associated proteins [BR:
sund01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121931506 (PCDH7)
Cell adhesion molecules [BR:
sund04515
]
Cadherins
Protocadherins
121931506 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
DUF6479
T3SS_ExsE
Motif
Other DBs
NCBI-GeneID:
121931506
NCBI-ProteinID:
XP_042325270
LinkDB
All DBs
Position
5:112819269..113287010
Genome browser
AA seq
1332 aa
AA seq
DB search
MGKMRACLGGLWLLLLLVLLSPAWAKQVLRYRLAEEGPADIRIGNVASDLGIVTGSGEVT
FSLESGSDYLKIDNMTGELSTTERRIDREKLPQCQMIFDENECFLDFEVSVIGPSQSWVD
LFEGRVIILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERYELLQE
PSAGGGPEGSRRGGGGQLGGSGSPSSSSSSAAESAPFPKRRQEADGAARSTVFELQVADT
PDGEKQPQLIVKGALDREQRDSYELSLRVRDGGDPARSSQAILRVLITDVNDNSPRFEKS
VYEADLAENSSPGTPILQLRAADADVGVNGQIEYVFGAATESVRRLLRLDESSGWLSVLH
RIDREEVNQLRFSVTARDRGQPPKSDKATVVLNIRDENDNVPAIDIRKIGRIPLRDGVAS
VAEDVLVDTPVALVQVSDRDQGENGVVTCTVVGDVPFQLKPASEGEGEPQNKRKYFLHTS
APLDYEAVRDYNVVIVAVDSGSPSLSSNNSLLVRVGDTNDNPPVFAQALLEVSFPENNAP
GERVATVLATDADSGKNAEITYSLEPSPLASSSGSEAPLGLFTIDPDSGDVRVQAVLDRE
QRDSYEFTVTARDKGLPSLQGSTAVLVRVADRNDNEPRFMQDVFTFYVKENLQPNSPVGM
VTVMDADKGRNAQLSLSIQSPSEAASSHPSGPGIFSIENDTGTIYSTVSFDRELQTSYTF
TVKAVDGGEPPRSATATVSLFVMDENDNAPVVRAPGNASYTVLPPSSGPRSVVAAVEARD
ADAGPNAELSFRLVGGNPYKLFEIDPSSGVVSLVGKLGPKHQGLHRLVVQVNDSGQPAQS
TTALLHVFVNESLANASAVESQVARSLHTPLARDIAGDPSYELSKQRLSILVGVVAGVVT
VVLLIAVVGLARYCRTRGKHGGYEAGKKDPQDFFTPQPHHHHHDKAKKPKKDPRHKGKKG
AGKAPEPLYSSIVTVEAPKPANGPHHPRYDEKLDGDSPALSRYRAVNGGPASPDLARHYK
SSSPLPTVQLHPHSPTAGKKHQAVQELPPANTFVGAGDNISIGSDHCSEYSCQAGSKYSK
QPFRRVTFSVVSQPQDPHQGSLQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTT
PDGSVGEAEHMENGRGELLVRFSASDTRITSLARKTILLPSGMADDFCAALAPGLGFSTW
GKIHSSDSRPLPDVALTGKCTRECDEYGHSDSCWMPVRTSPERKQKSQPKLSTFMPVDER
GSQEKLANGEASLMGDRNRNLLNKKLTSSYETFSASNFNKSEEANPEDIPLTQTGEYKPS
PVNTLTRREVYL
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagatgcgggcctgtttgggggggctctggctgctgctgctgctggtgctgctg
agcccggcgtgggcgaagcaggtgctgcgttaccggctggccgaggagggcccggctgac
atccggatcggcaacgtggcttcggacctgggcatcgtgaccggctcgggcgaggtgacg
ttcagcctggagtccggctccgactacctcaagatcgacaacatgaccggcgagctgagc
accaccgagcgccgcatcgaccgggagaagctgccgcagtgccagatgatcttcgacgag
aacgagtgcttcctggacttcgaggtctccgtcatcgggccctcgcagagctgggtggac
ctcttcgaaggccgggtcatcatcctggacatcaacgacaacacccccaccttcccctcc
ccggtcctcactctcaccgtcgaggagaaccgccccgtcggcaccctctacctcctgccc
accgccaccgaccgagacttcggcaggaacggcatcgagcgctacgagctgctccaggag
cccagcgccggagggggccctgagggcagcagaaggggaggcggagggcagctagggggc
agcggatcgccttcctcttcctcctcctccgccgccgagagcgcccccttccccaagagg
cggcaggaggcggacggcgcggcccggagcaccgtcttcgagctgcaggtggcggacact
cccgacggggagaagcagccccagctgatcgtcaaaggggcgctggaccgggagcagcgc
gactcctatgagctgagcctgcgggtgcgggacggaggggaccctgcgcgctcctcgcag
gccatcctccgggtgctgatcaccgacgtcaacgacaacagcccccgcttcgagaagagc
gtctacgaggccgacctggcagagaacagcagccctgggaccccgatcctccagctgcgg
gccgctgacgccgacgtcggggtgaacgggcagatcgagtacgtcttcggggcagccacc
gagtcagtgcgccgtctgctgcgtctggatgagtcctccggttggctgagcgtcctccac
cgcatcgaccgcgaggaggtcaaccagctgcgcttcagcgtcaccgcccgggaccggggc
cagccccccaagagcgacaaggccacggtggtgctcaacatccgcgacgagaacgacaac
gtgccggccatcgacatccgcaagatcgggcggatcccgctgcgcgacggggtggccagc
gtggccgaggacgtgctggtggacaccccggtggccctggtgcaggtctcggaccgggac
cagggcgagaacggggtggtgacctgcacggtggtgggcgacgtgcccttccagctcaag
ccggccagcgagggcgagggagagccccagaacaagcgcaagtacttcctccacacctca
gcgcccctcgactacgaggccgtccgtgactacaacgtggtcatcgtggccgtcgactcc
ggcagccccagtctctccagcaacaactccctgctggtccgggtgggagacaccaacgac
aacccgcccgtcttcgcccaggccctgctggaggtctccttccccgagaacaacgccccg
ggggagcgggtggccaccgtcctggccaccgacgccgacagcggcaagaacgccgagatc
acctactccctggagccctcgcccttggcctcctcctcgggctccgaggcccccttgggc
ctcttcaccatcgacccggactccggcgacgtgcgagtgcaagccgtgctggaccgggag
cagagggacagctacgagttcacggtgacggcgcgggacaagggcctgccctccttgcag
ggctccaccgccgtcttggtgcgggtggccgaccgcaacgacaacgagccccgcttcatg
caggacgtcttcaccttctacgtcaaggagaacctgcagcccaacagccccgtgggcatg
gtcaccgtcatggacgccgacaagggccgcaacgcccagctcagcctctccatccagagc
ccctcggaggccgcctccagccaccccagcggccccggcatcttctccatcgagaacgac
accggcaccatctactcgacggtctccttcgaccgggagctgcagaccagctacaccttc
acggtgaaggcggtggacggcggggagccgcctcgctcggccacggccaccgtctcgctc
ttcgtcatggacgagaatgacaacgcgccggtggtgcgggccccgggcaacgcctcctac
acggtgctgcccccctcgagcgggccccggtcggtggtggcggcggtggaggcccgggac
gccgacgctgggcccaacgccgagctgagcttccggctggtggggggcaacccctacaag
ctcttcgagatcgacccctccagcggggtggtctccctggtgggcaagctgggccccaag
caccagggcctccaccggctggtggtgcaggtcaacgacagcgggcagccggcccagtcc
accacggcgctgctccacgtcttcgtcaacgagagcctggccaacgcctcggccgtcgag
agccaggtggcccgcagcctccacacgcccctggcccgagacatcgccggagaccccagc
tacgagctcagcaagcagcgcctcagcatcctggtgggagtggtggccggcgtggtcacc
gtggtcctcctcatcgccgtcgtcggactggcccgctactgccgcacccggggcaagcac
ggcggctacgaggccggcaagaaggacccgcaggacttcttcaccccgcagccccaccac
caccatcacgacaaggccaagaagcccaagaaggacccccggcacaagggcaagaagggc
gccggcaaggcccccgagcccctctacagcagcatcgtcaccgtcgaggcccccaagccc
gccaacgggccccaccacccgcgctacgacgagaagctggacggagacagccccgccctc
agccgctaccgcgccgtcaacggcgggcccgccagccccgacctggcccgacactacaag
tccagctccccgctgcccaccgtccagcttcacccgcactcgcccaccgccggcaagaag
caccaggccgtccaggagctgcccccggccaacaccttcgtcggcgccggggacaacatc
tccatcggctccgaccactgctccgagtacagctgtcaggccggcagcaagtacagcaag
cagccattccgtagagtgacgttttcagttgtgagtcagcctcaggacccacatcaaggg
tcattgcagagttgctatgacagcggtctggaggagtcagaaacaccaagcagtaagagt
tcttcagggccgaggctgggtgcccttccactcccagaggacaactacgaaaggactacg
ccggatggcagtgttggtgaggcagagcatatggaaaatggaaggggagagttacttgtg
agattttctgcctcagataccagaataacttcactggccaggaaaactatccttttaccc
tcagggatggcagatgatttctgtgcagccttggctccaggattgggcttttccacctgg
ggaaagatacatagctctgattcaagacctttaccagatgtagctctgactgggaagtgt
actcgggaatgtgatgaatatggccattcagactcctgctggatgcctgtccgcacttca
cccgaaagaaaacaaaaaagccagccaaaactctccactttcatgcctgttgatgaacgg
ggcagtcaagagaagctggccaatggagaagcctccttgatgggtgaccgcaacagaaac
ctccttaacaaaaagttgacctcatcctatgagaccttcagtgcatctaatttcaacaaa
agcgaggaagccaacccagaggatattcccctcacacagacaggggaatacaagccatct
cctgtcaatactttaactagaagagaagtttacctttag
DBGET
integrated database retrieval system