Sceloporus undulatus (fence lizard): 121931637
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Entry
121931637 CDS
T07740
Symbol
CNTN1
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-1
KO
K06759
contactin 1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121931637 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sund04515
]
121931637 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sund00537
]
121931637 (CNTN1)
Cell adhesion molecules [BR:
sund04515
]
Immunoglobulin superfamily
Contactins
121931637 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sund00537
]
Others
121931637 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Tissue_fac
Ig_5
Interfer-bind
DUF4998
Motif
Other DBs
NCBI-GeneID:
121931637
NCBI-ProteinID:
XP_042325545
LinkDB
All DBs
Position
5:complement(64688793..64908511)
Genome browser
AA seq
992 aa
AA seq
DB search
MKLQSLTSHFVAICFIFCLTGPRCSNAAGSPVRDIQGLTVYVRGKXTKGDGPIFEEQPID
TVYPEESQKEELPXIVEARGIPTPTYKWQRNNWDIDIKIAKEHHVMIGGNLEINNPEKSR
DEGTYVCIAYNVHGTIRSREATLNFGYLYPFTPEERHAVKVREGVGAVLLCNPPPHYPDD
LSYRWVLNDFPEFITLDKRRYVSQSNGNLYIAKVEASDKGNYSCFVTSNSITKSVFSSFI
PLIPQADRTKGYLPDIRVKFKDTYALLGQNVTLECFALGNPVPEIRWNKYLEPMPTSADI
SMSGAVLRIYNIQFEDEGTYECEAENHRGKDKHSAKVYVQAYPEWVEHINDTERDLGSEF
HWPCVAAGKPIPTIRWLKDGIPYWKGDLRFSSLKNEDSGMYQCVAENIHGMIYSNAELKV
IVLAPTFEFYPMKKEVLAARGGQAIIECKPRAAPRPKLTWIKGADILRNSTRIRIWYDGS
LEIINVTAADAGNYTCFVENFKGKANSSSALLTTAPTRIDLAPTNVDVIVGQNATMQCHA
SHDPSLDLTFIWLLNGYPIDVDKESEYYERSIMVRPPGPPGGLKVEEIRNTSVVLTWSRG
TDNHSPISNYTIQSRTFLSDYWKDMKTDPLIVEGNVESAKVIDLVPWMEYEFRIMATNIL
GTGEPSIPSQKIQTDGSPPNVAPSEVGGGGGSNRELTITWVPLPREYHFGNNFGYVVAFK
SFDQKDWKRVTVPQPDIGRYVHKDESMPPSTQYQVKVRAFNNKGEGPFSLTAIIYSAEDA
PSERPRNVNVKVRSSTEATVSWEHIFNPAVTGYEIRYWSSREKEGAANRLQVGSMNFSVR
LENLKPDTQYYADVTAFNTAGFGPTTPPLGFLTEKAPPRQRPRIISAVRSGSKYIITWDH
VKSQSNESTVKGYKVLYRPDGQFNGTLFKTGKHYIEVPAPLKGQYVVEVRVHSEGGDGEV
AQVRIPGAAVGISPSCLGLLLPAIGILASLGF
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgaagctacagtctttaaccagtcattttgttgcaatctgtttcatattctgcctgaca
ggtccgaggtgttccaatgcagcagggagtcccgtacgtgatatccaaggactcacagtc
tatgtacgaggtaaatgaacaaaaggagatgggccaatttttgaagaacagcccattgat
acagtctacccagaagaatctcagaaggaagagttaccatgaattgtagaggccagaggt
atccctacccctacttacaagtggcagcgtaacaattgggatattgatattaaaattgca
aaggagcatcatgttatgataggaggtaacctggaaatcaataaccctgaaaaatcaagg
gatgaaggaacatacgtttgcatagcatacaatgtacatggaactataaggagccgagaa
gcaactctgaattttggatatctatatccttttacacctgaagagagacacgctgtaaaa
gtacgggaaggtgtaggtgctgtccttctctgtaaccctccacctcattatccagatgat
ctgagttatcgatgggttcttaatgatttcccagaattcattactttggataaacggcga
tatgtttcacaatcaaatggcaatctctacattgccaaagtggaagcatcagacaaaggc
aactactcttgttttgtgaccagcaattcaatcactaagagtgtgttcagcagtttcatt
ccacttattcctcaagcagatcgtacaaaaggctatcttccagatatcagagtgaagttt
aaagacacatatgcacttttaggacaaaatgtgacactggagtgttttgcacttggaaac
cctgttcctgagattagatggaataaatatctggaacctatgccaactagtgcagatata
agtatgtctggtgcagttctcaggatctacaatattcagtttgaagatgaagggacatat
gaatgtgaagctgaaaatcatagagggaaagataagcattcagcaaaagtttatgttcaa
gcatatccagaatgggtggaacacattaatgacacagaaagagatttaggcagtgagttt
cactggccatgtgtcgctgcaggcaaacctattccaacaatccgatggctgaaggatgga
ataccgtactggaagggagacttgagattttctagcctgaagaatgaagacagtggcatg
tatcaatgtgttgcagagaatatacatggaatgatttattcaaatgcagagctgaaagtt
attgttttagctccaacttttgaattctacccaatgaagaaagaagtcttggctgctcga
ggaggtcaggctataatcgagtgcaagcccagagcagctcctaggccaaaactcacatgg
atcaaaggagcagatattcttagaaattcaacccggatacgaatttggtatgatggaagt
ctagaaattattaatgtgacagcagcagatgcaggcaactacacttgttttgtagaaaat
ttcaaaggaaaagctaacagttcttctgctcttttgaccacagctcctacaaggatagat
ctagctccaactaatgttgatgtcattgttggacagaatgccaccatgcagtgtcatgca
tcccatgatccctctttagacttgacttttatttggcttctcaatggatatccaatagat
gttgataaagagagtgaatattatgaaaggagcattatggtaaggcctcctggtccccct
ggaggactcaaagtagaagaaatcagaaacacatctgtagttcttacttggagtcgtgga
acagacaatcatagtcctatttcaaattacactatccagtccaggacttttctttctgac
tactggaaagatatgaaaacagatcctctaattgttgaaggaaatgttgaatcagccaaa
gtgattgatttagtcccatggatggaatatgaattccggataatggccactaatatttta
gggacaggagaacctagtattccatcacagaaaattcaaacagatggatctcctcctaat
gtggctccttctgaagttggaggagggggtggcagcaatcgagaactgacaataacatgg
gtgcctttgccaagagagtatcactttggtaataattttggatatgtagtagcattcaag
tcctttgatcaaaaagactggaaaagagttacagttcctcagcctgatattggtcgatat
gtgcataaggatgaatcaatgcctccttcaacacagtaccaagtgaaagtgagagcattt
aataacaaaggtgaaggaccatttagccttactgctatcatctattcagcagaagatgct
ccttctgaaagacctagaaatgttaatgtaaaagtcagatcatccacagaagctactgtt
tcctgggagcatatttttaatccagctgttacaggatatgagatccgttattggtccagt
cgtgaaaaggaaggagctgcaaatagactacaagtgggcagtatgaatttttcagtaagg
ctagaaaatctgaaacctgacacacaatattatgcagatgtgacagctttcaatacagcc
ggatttggacctaccacaccaccgctgggttttcttacagaaaaagcacctccaaggcaa
cgaccaagaattatcagtgctgtaaggtctggttcaaagtatatcatcacatgggaccac
gttaaatcacagtctaatgaatctactgtgaaaggatataaagtgctctatagaccagat
ggccaatttaatggcacattatttaagactggtaaacattatatagaagttcctgctcct
cttaagggtcagtacgttgttgaagtccgagttcacagtgaaggaggagatggagaagta
gctcaagtaagaattccaggagctgctgtgggaatatcacctagttgtcttggtttattg
ctgcctgccattggtatccttgcctccttgggattctga
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