Sceloporus undulatus (fence lizard): 121931660
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Entry
121931660 CDS
T07740
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121931660 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sund03041
]
121931660 (DHX15)
03009 Ribosome biogenesis [BR:
sund03009
]
121931660 (DHX15)
Enzymes [BR:
sund01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121931660 (DHX15)
Spliceosome [BR:
sund03041
]
Complex A
U2 snRNP components
U2 related factors
121931660 (DHX15)
Complex B
121931660 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
121931660 (DHX15)
Ribosome biogenesis [BR:
sund03009
]
Eukaryotic type
90S particles
Helicases
121931660 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
Motif
Other DBs
NCBI-GeneID:
121931660
NCBI-ProteinID:
XP_042325571
LinkDB
All DBs
Position
5:91263503..91292562
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AA seq
486 aa
AA seq
DB search
MTRLYGDNTENKMGTASDKEMQTGAEAVSLRSPSNEVCADYILDTLEIKEKEIDEACKRI
KREIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKPNGAIGRKVVVSTNIAETSLT
IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA
YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL
NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEILSITAMLSVPQCFVRPTEAKKA
ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMD
RFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDH
KPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQS
KEYSQY
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgacaagactttatggtgataatactgaaaacaaaatggggactgcttcggacaaagag
atgcagacaggagctgaagccgtttctttaagatctcctagtaacgaggtgtgtgcggat
tatattttggatacccttgagattaaagagaaggaaatagatgaggcctgtaagaggata
aagcgtgaaatcgacgatctgggccctgaagttggtgacattaaaatcattccattatat
tctacgcttccaccacaacagcagcagaggatttttgagccaccccctccaaaaaaacca
aatggtgcaataggacgaaaggttgttgtatccactaatatcgctgagacatcattgaca
atagatggtgttgtatttgtcattgatcctggatttgctaaacaaaaggtatacaatcct
cggataagagtggaatctctcttggtaactgcaataagtaaagcttctgcccagcagaga
gctggccgtgctggtcgtactagaccaggcaaatgttttcgattatatacagagaaggct
tacaaaactgagatgcaggacaatacgtatcctgagattctgaggtccaacttgggttct
gtcgtattacagctgaagaaacttggcatagatgatttggttcactttgattttatggat
ccaccagcaccagaaaccctgatgagagccctagagcttttgaattacctagctgcttta
aatgatgatggagacttgactgaattgggatccatgatggcagaatttccacttgatcca
cagctggctaaaatggttattgcaagttgcgactacaactgttctaatgagattctgtct
ataactgccatgctgtcagtcccacagtgttttgttcgccccacggaagccaagaaagca
gcagatgaagccaagatgaggtttgcccacatagatggagatcatttgacgttgctgaat
gtctaccatgctttcaaacagaatcatgaatcggttcagtggtgttatgacaacttcatt
aactacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggac
agatttaatttgccacgtagaagcacagacttcacaagccgggactattacatcaatata
aggaaggctttagttactggttacttcatgcaggtagcacatttggaacggacgggacac
tatctaacagtgaaagacaaccaggtagtgcagttacatccttctacagttcttgatcac
aagcctgaatgggtgctttacaatgaatttgtcctcaccacaaagaactatatccgaact
tgtacagacatcaagccagaatggttggtgaaaatagcccctcaatattatgacatgagc
aatttcccacagtgtgaagcaaagagacagttggatcgcatcattgccaaacttcagtcc
aaggaatattcacagtactga
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