Sceloporus undulatus (fence lizard): 121931726
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Entry
121931726 CDS
T07740
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121931726 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sund04990
]
121931726 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
sund04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121931726 (PDLIM5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
Motif
Other DBs
NCBI-GeneID:
121931726
NCBI-ProteinID:
XP_042325640
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Position
5:complement(173613127..173753895)
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AA seq
875 aa
AA seq
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MNNYSVSLVGPAPWGFRLQGGKDFNMPLTISRLLKEVVHRPVPVCELLAPSRKTNYCFRN
CSVAWDEGVAPAAPKPDPIPVQQVEPKELVKPVPIASTVMPKVSSTANMAFNKAPRPFGA
VSSPKVTSIPSPSSAFTPAHANFSSHASPTPLATVTPPQFTASGLHANAKSNPDQRSPVL
SAAKPAVNIPWQPTHNASLNSPFNENAQEVTEGQRRGFKENQVENKEQNGPPRKHVVYTN
TEFYHPPTHSNHSKKRLIEDTEDWHPRTGTTQSRSFRILAQITGTEHMKEPEPDNPKKTK
ESQTENGDWSFSTDLINGLETQHPISVATQTCEMSDVSEQPVLLSPAQRAEANSTTSFLL
RGPSPITVSSTKLSGPAASTTSFKRDLIFRNPLEALPKCAPHPPAVVHILNINQQVAIVS
KRASTYTRSNRIKTGSPVLSAPDAASLRADGADNKRNLPVMSTEATQTSEPLVYPVASVE
STLAVQPVKPALVPELTGRKLPLENPLESCLSLSAIPSTSFSKVISSQVRNSAAAAVSAA
VAIRARLSHQNTYRSLLDALLITPIIKPPPLESRPSRKSTSILDMQKNWRYDPLEPAQYS
AATVRNMPENSENDVNRTVSANATSVPALKPTEPQYAVKTSGWQSSNQPVGSGWTSNNNA
RPGATVSGEKTTTPAPLTDEDTLVQRAEHIPAGKRTPMCAHCDQVIRGPFLVALGKSWHP
EEFNCAHCKTSMAYIGFVEEKGALYCEGCYEKFFAPECARCQRKILGEVINALKQTWHVS
CFVCVACHKPIRNNVFHLEDGDPYCETDYYALFGTMCHGCEFPIEAGDRFLEALGHTWHD
TCFVCSICCESLEGQTFFSKKDKPLCKKHAHSVNI
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgaacaattacagtgtatctttggttggtccagccccttggggtttcaggcttcaaggt
ggcaaagacttcaacatgcctttgacaatctctcggctactcaaagaggtagtccataga
ccagtgccagtctgcgagctgctggctcctagtagaaaaactaattactgtttcaggaat
tgttctgttgcttgggatgagggagtagcacctgcagctcccaagcctgatcctatacct
gtgcagcaggtagaacctaaggagctagttaagcctgtgcccattgcatccacagtcatg
cccaaagtttcatccacagccaacatggccttcaataaagccccaaggccatttggggca
gtgtcatcccccaaagtcacttccattccatcaccatcgtctgccttcactccagcccat
gcaaatttttcatcacatgcttcccctacaccactggctactgtcacgcctccccaattc
actgcctctggattgcatgctaatgccaaatcaaatcctgaccagcgttcacctgtattg
agtgctgccaaacctgcagttaatatcccatggcaacccacacacaatgcatccttgaat
tccccattcaacgaaaatgcacaggaggtgacagaggggcaacgcagaggattcaaagag
aaccaggttgaaaataaagagcaaaatggtccaccacggaagcatgttgtatatacaaat
acagaattttaccacccaccaactcatagcaatcatagcaagaaacgcctgattgaggat
actgaggactggcatccaagaacaggaacaacccagtcacgttccttccgcatcctggcc
cagattactgggaccgaacacatgaaagaaccagaacctgataatccaaaaaagacaaag
gaaagtcaaacagaaaatggagattggagcttctctacagatttaatcaatggactggaa
acacagcatcccatttcagtagctacccagacctgtgagatgtctgatgtgtcagaacaa
ccagtgttactttccccagctcaaagggcagaagcaaattcaactacctccttcttgcta
agaggcccatctcctatcactgtttcttctaccaaactttctggacctgctgcttccact
acatctttcaagagagaccttattttcaggaatcctttggaagccctacccaagtgtgca
cctcatccacctgctgttgttcatattttaaacattaaccaacaagtagccattgtgtct
aaaagagcatcaacttatactaggtcaaataggataaaaactggttctccagtgttgagt
gccccagatgctgcatcgttgagagcagatggagctgataataaaagaaaccttcctgtg
atgagcacagaagcaactcagacttctgagccactggtctacccagttgcttctgtggaa
tctactttagctgtccagcctgtgaaacctgcactggtacccgaacttactggcaggaaa
ttgcctctggaaaatccattggaaagttgtctatcactttctgctatcccttcaacttca
ttttcaaaggtgatatcatcacaagttaggaatagtgctgctgctgctgtgtctgctgct
gttgctatacgggccagactctcccatcagaatacttaccgttctctcttggatgctctt
ctcattactcctattattaaacctccgcctctggaaagcagaccatcaagaaaatcaaca
agtattttggacatgcaaaagaactggcgatatgatcctctggaacctgctcaatattct
gctgccacagtaagaaatatgcctgaaaactcagaaaatgatgtgaataggacagtgtct
gccaatgcaacatcagtaccagccttgaagccaacagaacctcaatatgctgtcaaaacc
tcaggctggcagtcttctaatcagccagttggaagtggttggacatcaaacaataatgct
agacctggagcaactgtctcaggtgaaaaaactacaacaccagctccactaacagatgaa
gacactttagtgcagagagcagagcatattccagcaggaaaacgaactccaatgtgtgcc
cactgcgaccaagtgattagagggccttttctagtggccttagggaagtcttggcaccca
gaggaatttaattgtgctcactgcaaaacctccatggcttacattggctttgtagaagag
aaaggagctctttattgtgaaggctgttatgagaagttttttgccccagaatgtgcccga
tgccagaggaagatactgggagaagtaataaatgctttgaaacaaacctggcatgtttcc
tgctttgtgtgtgtggcttgccacaagcccattcggaacaatgttttccatttggaagat
ggtgatccctactgtgagacagattattatgccctctttggtaccatgtgccatggttgt
gaattccccattgaagctggggacaggttcctggaagccttgggccacacttggcatgat
acctgctttgtgtgttcaatatgctgtgagagtttggaaggtcagacattcttctccaag
aaggacaagcccttgtgcaagaaacatgctcactctgtaaacatctga
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