Sceloporus undulatus (fence lizard): 121931789
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Entry
121931789 CDS
T07740
Symbol
CAPRIN2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121931789 (CAPRIN2)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121931789 (CAPRIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
C1q
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
121931789
NCBI-ProteinID:
XP_042325739
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Position
5:complement(21537091..21586286)
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AA seq
1151 aa
AA seq
DB search
MVQLSQSPLRHPSPSCCSEEGEEKSMKTAKQQVTQGPRGDNQLPLSSIALNSATTASQAY
ETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKRGESLNQDQLEAVEKYDEVIHNLEFAK
ELQKTFSGLSQDLLKAQRKAQRRETLLKLEAEKKKLRTVLQVQYVLQNFIQEHVQKDFKG
GLNGAIFLPSKELDYLIKFAKLTCSGRNEMVSIEDQMEQSSLYFWDLLEGSEKAVAGTTY
KHLKDLLSKLLNSGYFENIPTPCNVPEKEDLKEDMLRKPEVKEEHKRPEKTKQQSKLESI
NQPETQMDHIQSEIQPQEFLNRRYLPDVDYTIKPEDSKPWEIEHSKKNELPKSWEILVDM
EEQDQKKQKQESLKPLESVRRQGKKPELSRPWEVPVKDDDDDDQRQEVSKSWVAQVRDQQ
SSPKPWITKVKEEQEQKQDIAKPWMSKAKEELEQKQETSKALIAQARVESVQKPELVKPW
GACVREETEQTKQEPAKPWIAHIGEETEQTAQTPRVWETSEGPRQTAQQPLQNPPKIWGA
GNLVPKEQTGPKKLDLEPKERRDRRLKLDSDVKQDGKTDGLSGQHTDAVKKKESLQSVRE
TCKLSKSFQNIVQPAAEFCSVSSLPKDPVLRREKLQDLITQIQGTYNFMQESILDFDKPS
QSATCSSQASSVDSTVSNEQLPSQNNFPEQPIQTTVSNRQEPENFNSSPSVCQASQGISE
SLVPQKSEIGQAPTAVSSESEIPVTPSRTTMSPVSQGKAFQSPPSNSSVVNMKTPPFQAM
QTVFKVNAPLPPRREQDIKENSLQPTGYNQNFSTASTQTPPQCKLQSIQNAEQTAFSQES
LSNAGNYQVEGAVPVSNGSLTFYAAQTTTFPKPSQPFVTSRGGSVRGSVRGVRSITSSYR
SPGGYKAGFEAYRGSPSAPNGSYSQLQLPGRDYSTVQYSQRDVNYQPNYKRGAISSGRAN
SRAGWSDSSQVSSPERDSEAFNSGDSGQGDSRSLTPVDMPVTSQAATILPVHVYPLPQQM
RVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDIQLGRFNCPVNGTYVFIFHMLKLAV
NVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAVLQLFQGDQIWLRLHRGAIYGSSWKY
STFSGYLLYQD
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctttcacagtccccgcttcgtcacccttcgccttcatgctgctctgaagaa
ggggaggagaagagcatgaaaacagctaagcagcaggtgactcaaggtcctcgaggggat
aaccagcttccattgagctcgattgctttgaattctgccaccacagcgtcccaggcctat
gagacatacattgataatgggcttatttgtctaaaacacaagatcaggaacattgagaaa
aagaagctcaaactagaagactacaaagatcgtctgaaacgaggggagtccctcaaccag
gaccagttggaagcagttgaaaaatatgatgaagtgatacataacttggagtttgctaaa
gaacttcagaagacattttctgggcttagtcaagatctgttgaaagcacagaggaaagca
cagagaagggagaccctactgaagcttgaagcagaaaagaagaagctccgcacagtactg
caggtccagtatgtgctacagaatttcattcaagagcatgtgcagaaagacttcaagggt
ggcttgaatggtgcgatattcctgccttctaaagaactagactacctcattaagtttgca
aaactgacatgttctggaagaaatgagatggttagtattgaagaccaaatggagcaatca
tcactctacttctgggatctgctagaaggcagtgaaaaagcagtggctgggacaacttat
aagcacttgaaggatttgttatctaaattattaaattctggttattttgaaaacattcct
acaccttgcaatgtaccagagaaagaggatctgaaagaagatatgctcagaaagcctgaa
gtgaaagaagagcacaaaagacctgaaaaaacaaagcaacaatcaaaactggaatctatc
aatcaaccagaaactcaaatggatcacattcaatctgagatacagccacaagagtttctt
aataggcgatatttgccagatgttgactatactatcaagcctgaagattctaaaccttgg
gaaatagaacatagtaaaaagaatgaacttccaaaatcctgggaaatccttgtagacatg
gaagagcaggatcagaagaagcagaaacaagaatcattaaaacctttggaatcagtaagg
cgacaggggaaaaaaccagaactttcaaggccttgggaagttccagtgaaagatgatgat
gatgatgatcaaaggcaggaagtttcaaagtcttgggtggcacaggtcagggatcagcaa
agctctcccaaaccctggataactaaagttaaagaagagcaggaacagaagcaagatatt
gcaaaaccttggatgtccaaagctaaggaagagctagaacaaaagcaagaaacatcaaaa
gcattgattgcccaggccagggtggaatctgtgcagaaacctgaacttgtgaaaccttgg
ggtgcatgtgttagagaggagacagagcaaacaaaacaggaacctgcaaaaccatggata
gcacacataggggaagaaacagaacagacagcccagacacctagggtttgggaaacatct
gagggaccacggcaaacagctcaacagccattacaaaatcctcccaagatctggggagca
ggaaatcttgtgccaaaggaacagactgggccaaagaagcttgacttggaacccaaagaa
agacgagaccgcagattgaagcttgactctgatgtgaaacaagatggaaaaacagatgga
ctaagtggccaacacactgatgctgtcaagaagaaagagagccttcagtcagttagagaa
acctgtaaactatctaagagttttcagaatattgtgcagccagctgcagagttttgctct
gtttctagtcttccgaaggatccagtgctaagaagggaaaaactacaggatctaatcact
cagatacaaggaacctacaactttatgcaagagtctattctagattttgataaaccttca
caaagtgccacttgttcatcccaagcatcttcagttgattctacagtttctaatgagcaa
cttccaagccaaaataatttccctgaacaaccaatacagacaactgtttcaaatcgtcag
gagccagagaactttaattcatctccatctgtgtgtcaggcaagccaggggatttctgag
tcattagtgcctcaaaagagtgaaattggtcaggctcctactgctgtttcaagtgaatca
gagatacccgtgacaccatcaagaactaccatgtcaccagtatcccaagggaaagctttc
caatctcctccatcaaatagcagtgttgttaacatgaaaacacctccttttcaggccatg
cagactgtgttcaaagtgaatgcacctttgccccctcgtagggagcaggatatcaaagaa
aattctctgcaacctacaggatataatcagaatttttctacagcaagtacacagactcct
ccccagtgtaaattacagtctattcaaaatgctgaacaaactgctttttctcaagagtct
ctttcaaatgcaggtaattaccaggttgagggagccgttcctgtaagcaatggtagtctc
accttttacgcagcacagacaaccactttccctaaaccatctcagccttttgttacaagc
cgtggtggatcagttagaggttccgtcagaggtgtaagatcaattacctcttcttatcgt
tctcctggtggctataaggcaggttttgaagcttacaggggatcaccttcagcccccaac
ggttcctacagccagttgcaacttcctggcagagactattctacagtgcaatattctcag
agggatgtaaattatcagccgaactataaacgaggtgctattagcagtggccgtgccaat
tcaagagcaggctggagcgattcttctcaggtgagcagcccagaacgtgacagtgaggcc
tttaacagtggggattctgggcagggtgactcccgcagccttactcctgttgatatgcca
gtgacaagccaagcagctaccatcctacctgtgcacgtctatccccttccgcagcagatg
agagttgccttctcagctgctagaacttctaacttggctcctggaactctagatcaaccc
atcgtgtttgacctcctgttaaacaatcttggtgaaacctttgatatccaacttggtagg
tttaactgtcctgtcaatggcacctatgtgttcatattccatatgctgaaactggctgtg
aatgttccattgtatgtgaacctcatgaaaaatgaagaagttctagtatctgcatatgcc
aatgatggtgctccagatcatgagactgctagtaatcatgcagtcctgcagcttttccaa
ggagaccagatttggctgcgcctccatagaggggctatttatggaagtagctggaaatat
tctacattctcaggatacctcctgtatcaagactga
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